RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W RAM1P22007 431 aa5.33□□□□□ -1.56
SRL1YOR247W NUD1P32336 851 aa5.33□□□□□ -1.56
SRL1YOR247W SAS4Q04003 481 aa5.32□□□□□ -1.56
SRL1YOR247W GYP1Q08484 637 aa5.31□□□□□ -1.56
SRL1YOR247W YPR015CQ12531 247 aa5.3□□□□□ -1.56
SRL1YOR247W PRT1P06103 763 aaKnown RBP5.28□□□□□ -1.56
SRL1YOR247W PKC1P24583 1151 aa5.28□□□□□ -1.56
SRL1YOR247W MRF1P30775 413 aaPredicted RBP5.27□□□□□ -1.57
SRL1YOR247W GCD11P32481 527 aaKnown RBP5.27□□□□□ -1.57
SRL1YOR247W YJL007CP47080 104 aa5.27□□□□□ -1.57
SRL1YOR247W STR2P47164 639 aa5.27□□□□□ -1.57
SRL1YOR247W ISM1P48526 1002 aa5.27□□□□□ -1.57
SRL1YOR247W BUD20Q08004 166 aaPredicted RBP5.27□□□□□ -1.57
SRL1YOR247W PAT1P25644 796 aaKnown RBP5.26□□□□□ -1.57
SRL1YOR247W RPL34BP40525 121 aaKnown RBP5.26□□□□□ -1.57
SRL1YOR247W RTF1P53064 558 aa5.26□□□□□ -1.57
SRL1YOR247W YMR196WQ04336 1088 aa5.26□□□□□ -1.57
SRL1YOR247W GLN1P32288 370 aaKnown RBP5.25□□□□□ -1.57
SRL1YOR247W BIM1P40013 344 aa5.25□□□□□ -1.57
SRL1YOR247W YBL036CP38197 257 aa5.24□□□□□ -1.57
SRL1YOR247W SIT4P20604 311 aa5.23□□□□□ -1.57
SRL1YOR247W SPT16P32558 1035 aaKnown RBP5.23□□□□□ -1.57
SRL1YOR247W YNL115CP53925 644 aa5.23□□□□□ -1.57
SRL1YOR247W NIS1P53939 407 aa5.23□□□□□ -1.57
SRL1YOR247W TYW1Q08960 810 aaKnown RBP5.23□□□□□ -1.57
SRL1YOR247W SSA1P10591 642 aaKnown RBP5.22□□□□□ -1.57
SRL1YOR247W KEX2P13134 814 aa5.22□□□□□ -1.57
SRL1YOR247W KTR1P27810 393 aaKnown RBP5.22□□□□□ -1.57
SRL1YOR247W HST2P53686 357 aa5.22□□□□□ -1.57
SRL1YOR247W MMP1Q12372 583 aa5.22□□□□□ -1.57
SRL1YOR247W YEL077CQ3E7X8 1277 aa5.22□□□□□ -1.57
SRL1YOR247W DPS1P04802 557 aaKnown RBP5.21□□□□□ -1.58
SRL1YOR247W ERG12P07277 443 aa5.21□□□□□ -1.58
SRL1YOR247W SSA4P22202 642 aaKnown RBP5.21□□□□□ -1.58
SRL1YOR247W CSE4P36012 229 aa5.21□□□□□ -1.58
SRL1YOR247W ATG32P40458 529 aa5.21□□□□□ -1.58
SRL1YOR247W FPK1P53739 893 aa5.21□□□□□ -1.58
SRL1YOR247W TY1A-DR4O74302 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-HP0C2I4 478 aaKnown RBP5.2□□□□□ -1.58
SRL1YOR247W TY1A-AP0CX57 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-PR1P0CX58 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-ORP0CX59 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-PR2P0CX60 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-DR5P0CX65 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-ER2P0CX66 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-GR3P0CX67 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-LR1P0CX68 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-MR2P0CX69 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-JR2P47099 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-DR1Q03856 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-ML1Q04706 440 aaKnown RBP5.2□□□□□ -1.58
SRL1YOR247W SUB2Q07478 446 aaKnown RBP5.2□□□□□ -1.58
SRL1YOR247W TY1A-BRQ12217 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-NL2Q12470 440 aa5.2□□□□□ -1.58
SRL1YOR247W TY1A-GR2Q12485 440 aa5.2□□□□□ -1.58
SRL1YOR247W TIF1P10081 395 aaKnown RBP5.19□□□□□ -1.58
SRL1YOR247W SEC2P17065 759 aa5.19□□□□□ -1.58
SRL1YOR247W RRN7P40992 514 aa5.19□□□□□ -1.58
SRL1YOR247W PKH3Q03306 898 aaPredicted RBP5.19□□□□□ -1.58
SRL1YOR247W GEF1P37020 779 aa5.18□□□□□ -1.58
SRL1YOR247W SLY41P22215 453 aa5.17□□□□□ -1.58
SRL1YOR247W AMS1P22855 1083 aa5.17□□□□□ -1.58
SRL1YOR247W ERF2Q06551 359 aa5.17□□□□□ -1.58
SRL1YOR247W RAD59Q12223 238 aa5.17□□□□□ -1.58
SRL1YOR247W ARG8P18544 423 aa5.16□□□□□ -1.58
SRL1YOR247W ESS1P22696 170 aa5.16□□□□□ -1.58
SRL1YOR247W RTG2P32608 588 aaKnown RBP5.16□□□□□ -1.58
SRL1YOR247W SLX8P40072 274 aa5.15□□□□□ -1.59
SRL1YOR247W TUB4P53378 473 aa5.15□□□□□ -1.59
SRL1YOR247W TBF1Q02457 562 aa5.15□□□□□ -1.59
SRL1YOR247W SCJ1P25303 377 aa5.14□□□□□ -1.59
SRL1YOR247W SPT5P27692 1063 aaKnown RBP5.14□□□□□ -1.59
SRL1YOR247W YNL108CP53929 270 aa5.14□□□□□ -1.59
SRL1YOR247W YPR204WQ08995 1032 aa5.14□□□□□ -1.59
SRL1YOR247W BIO2P32451 375 aa5.13□□□□□ -1.59
SRL1YOR247W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SRL1YOR247W KXD1P53158 218 aa5.13□□□□□ -1.59
SRL1YOR247W PUS6P53294 404 aa5.13□□□□□ -1.59
SRL1YOR247W AGE1Q04412 482 aa5.13□□□□□ -1.59
SRL1YOR247W LAM6Q08001 693 aa5.13□□□□□ -1.59
SRL1YOR247W SDH2P21801 266 aa5.12□□□□□ -1.59
SRL1YOR247W YJU3P28321 313 aa5.12□□□□□ -1.59
SRL1YOR247W SIS2P36024 562 aa5.12□□□□□ -1.59
SRL1YOR247W RPL34AP87262 121 aaPredicted RBP5.12□□□□□ -1.59
SRL1YOR247W YML020WQ03722 664 aa5.12□□□□□ -1.59
SRL1YOR247W RAS1P01119 309 aa5.11□□□□□ -1.59
SRL1YOR247W TTI1P36097 1038 aa5.11□□□□□ -1.59
SRL1YOR247W PAC1P39946 494 aaKnown RBP5.11□□□□□ -1.59
SRL1YOR247W SUP45P12385 437 aaKnown RBP5.1□□□□□ -1.59
SRL1YOR247W CPS1P27614 576 aa5.1□□□□□ -1.59
SRL1YOR247W MAK16P10962 306 aaPredicted RBP5.09□□□□□ -1.59
SRL1YOR247W TRM1P15565 570 aaKnown RBP5.09□□□□□ -1.59
SRL1YOR247W RPA14P50106 137 aa5.09□□□□□ -1.59
SRL1YOR247W ALR1Q08269 859 aa5.09□□□□□ -1.59
SRL1YOR247W SLD2P34252 453 aa5.08□□□□□ -1.6
SRL1YOR247W RSC30P38781 883 aa5.08□□□□□ -1.6
SRL1YOR247W CST6P40535 587 aa5.08□□□□□ -1.6
SRL1YOR247W BDP1P46678 594 aa5.08□□□□□ -1.6
SRL1YOR247W YPP1P46951 817 aa5.08□□□□□ -1.6
SRL1YOR247W FRK1Q03002 865 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms