RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeastyeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI2YOR043W MRM1P25270 412 aa8.66□□□□□ -1.02
WHI2YOR043W LTE1P07866 1435 aa8.65□□□□□ -1.02
WHI2YOR043W PSD2P53037 1138 aaKnown RBP8.65□□□□□ -1.02
WHI2YOR043W YNL035CP53962 389 aaKnown RBP8.65□□□□□ -1.02
WHI2YOR043W SEC61P32915 480 aa8.64□□□□□ -1.03
WHI2YOR043W YLR271WQ06152 274 aa8.64□□□□□ -1.03
WHI2YOR043W BUD3P25558 1636 aa8.64□□□□□ -1.03
WHI2YOR043W IQG1Q12280 1495 aa8.62□□□□□ -1.03
WHI2YOR043W BUD21Q08492 214 aaPredicted RBP8.6□□□□□ -1.03
WHI2YOR043W YSP2Q06681 1438 aa8.6□□□□□ -1.03
WHI2YOR043W DRS2P39524 1355 aa8.57□□□□□ -1.04
WHI2YOR043W BCK2P33306 851 aa8.57□□□□□ -1.04
WHI2YOR043W TFG1P41895 735 aaPredicted RBP8.57□□□□□ -1.04
WHI2YOR043W MMS1Q06211 1407 aa8.55□□□□□ -1.04
WHI2YOR043W ITT1Q04638 464 aa8.55□□□□□ -1.04
WHI2YOR043W BNR1P40450 1375 aa8.54□□□□□ -1.04
WHI2YOR043W SEC7P11075 2009 aaKnown RBP8.53□□□□□ -1.04
WHI2YOR043W SAP30P38429 201 aa8.52□□□□□ -1.05
WHI2YOR043W YMR1P47147 688 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
WHI2YOR043W DBP1P24784 617 aaKnown RBP8.51□□□□□ -1.05
WHI2YOR043W VMA1P17255 1071 aaKnown RBP8.5□□□□□ -1.05
WHI2YOR043W YFR006WP43590 535 aa8.5□□□□□ -1.05
WHI2YOR043W BNI1P41832 1953 aa8.49□□□□□ -1.05
WHI2YOR043W TRM3Q07527 1436 aa8.48□□□□□ -1.05
WHI2YOR043W GCN2P15442 1659 aa8.48□□□□□ -1.05
WHI2YOR043W DOP1Q03921 1698 aa8.48□□□□□ -1.05
WHI2YOR043W CHL1P22516 861 aaPredicted RBP8.46□□□□□ -1.05
WHI2YOR043W SAM3Q08986 587 aa8.46□□□□□ -1.05
WHI2YOR043W VPS29P38759 282 aa8.45□□□□□ -1.06
WHI2YOR043W DAN4P47179 1161 aa8.44□□□□□ -1.06
WHI2YOR043W CHC1P22137 1653 aaKnown RBP8.44□□□□□ -1.06
WHI2YOR043W STS1P38637 319 aa8.43□□□□□ -1.06
WHI2YOR043W YDL129WQ07555 291 aa8.43□□□□□ -1.06
WHI2YOR043W NOP7P53261 605 aaKnown RBP8.42□□□□□ -1.06
WHI2YOR043W PAF1P38351 445 aa8.41□□□□□ -1.06
WHI2YOR043W PRE3P38624 215 aa8.41□□□□□ -1.06
WHI2YOR043W JIP4Q03361 876 aa8.41□□□□□ -1.06
WHI2YOR043W YOR093CQ12275 1648 aa8.38□□□□□ -1.07
WHI2YOR043W RTG3P38165 486 aa8.37□□□□□ -1.07
WHI2YOR043W PDR5P33302 1511 aaKnown RBP8.35□□□□□ -1.07
WHI2YOR043W ABP1P15891 592 aaKnown RBP8.34□□□□□ -1.07
WHI2YOR043W VMR1P38735 1592 aa8.33□□□□□ -1.08
WHI2YOR043W POL5P39985 1022 aaKnown RBP8.33□□□□□ -1.08
WHI2YOR043W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
WHI2YOR043W NUP188P52593 1655 aaKnown RBP8.33□□□□□ -1.08
WHI2YOR043W PDR11P40550 1411 aa8.33□□□□□ -1.08
WHI2YOR043W URN1Q06525 465 aaKnown RBP8.32□□□□□ -1.08
WHI2YOR043W GYP5Q12344 894 aa8.32□□□□□ -1.08
WHI2YOR043W HTA1P04911 132 aaKnown RBP8.31□□□□□ -1.08
WHI2YOR043W HTA2P04912 132 aa8.31□□□□□ -1.08
WHI2YOR043W IPL1P38991 367 aa8.31□□□□□ -1.08
WHI2YOR043W IML1P47170 1584 aa8.31□□□□□ -1.08
WHI2YOR043W DNF2Q12675 1612 aa8.3□□□□□ -1.08
WHI2YOR043W TYS1P36421 394 aaKnown RBP8.3□□□□□ -1.08
WHI2YOR043W RAV1P47104 1357 aa8.3□□□□□ -1.08
WHI2YOR043W YAP3P38749 330 aa8.29□□□□□ -1.08
WHI2YOR043W CST9Q06032 482 aa8.29□□□□□ -1.08
WHI2YOR043W DCW1P36091 449 aa8.28□□□□□ -1.08
WHI2YOR043W RTC1Q08281 1341 aa8.28□□□□□ -1.08
WHI2YOR043W VRP1P37370 817 aa8.27□□□□□ -1.09
WHI2YOR043W XDJ1P39102 459 aa8.27□□□□□ -1.09
WHI2YOR043W YEL023CP39992 682 aa8.27□□□□□ -1.09
WHI2YOR043W PTC4P38089 393 aa8.26□□□□□ -1.09
WHI2YOR043W ORC1P54784 914 aaPredicted RBP8.26□□□□□ -1.09
WHI2YOR043W TAF5P38129 798 aa8.24□□□□□ -1.09
WHI2YOR043W SSP1P38871 571 aa8.24□□□□□ -1.09
WHI2YOR043W RCR1P38212 213 aa8.21□□□□□ -1.09
WHI2YOR043W ESL2P36168 1195 aa8.2□□□□□ -1.1
WHI2YOR043W YDR344CQ05510 147 aa8.2□□□□□ -1.1
WHI2YOR043W DPS1P04802 557 aaKnown RBP8.19□□□□□ -1.1
WHI2YOR043W MGA2P40578 1113 aa8.18□□□□□ -1.1
WHI2YOR043W NUP192P47054 1683 aa8.17□□□□□ -1.1
WHI2YOR043W KIP3P53086 805 aaKnown RBP8.17□□□□□ -1.1
WHI2YOR043W ELP4Q02884 456 aaKnown RBP8.17□□□□□ -1.1
WHI2YOR043W TY3B-IQ7LHG5 1498 aaKnown RBP8.17□□□□□ -1.1
WHI2YOR043W DNF3Q12674 1656 aa8.15□□□□□ -1.1
WHI2YOR043W RAD9P14737 1309 aa8.14□□□□□ -1.11
WHI2YOR043W ALD4P46367 519 aaKnown RBP8.14□□□□□ -1.11
WHI2YOR043W PML39Q03760 334 aa8.13□□□□□ -1.11
WHI2YOR043W RGA2Q06407 1009 aa8.13□□□□□ -1.11
WHI2YOR043W MAK10Q02197 733 aa8.13□□□□□ -1.11
WHI2YOR043W CAB1Q04430 367 aa8.13□□□□□ -1.11
WHI2YOR043W MHP1P43638 1398 aa8.12□□□□□ -1.11
WHI2YOR043W TAF8Q03750 510 aa8.12□□□□□ -1.11
WHI2YOR043W HAP1P0CE41 1502 aa8.11□□□□□ -1.11
WHI2YOR043W SPE2P21182 396 aa8.11□□□□□ -1.11
WHI2YOR043W YLR419WQ06698 1435 aaKnown RBP8.11□□□□□ -1.11
WHI2YOR043W SPT7P35177 1332 aa8.1□□□□□ -1.11
WHI2YOR043W BCK1Q01389 1478 aa8.1□□□□□ -1.11
WHI2YOR043W MRX12P47084 519 aa8.1□□□□□ -1.11
WHI2YOR043W SEC3P33332 1336 aaKnown RBP8.09□□□□□ -1.11
WHI2YOR043W KRE5P22023 1365 aa8.08□□□□□ -1.12
WHI2YOR043W NAP1P25293 417 aaKnown RBP8.07□□□□□ -1.12
WHI2YOR043W PDS5Q04264 1277 aa8.07□□□□□ -1.12
WHI2YOR043W RIA1P53893 1110 aa8.06□□□□□ -1.12
WHI2YOR043W SCT1P32784 759 aa8.06□□□□□ -1.12
WHI2YOR043W LEU3P08638 886 aa8.05□□□□□ -1.12
WHI2YOR043W CHZ1P40019 153 aaPredicted RBP8.04□□□□□ -1.12
WHI2YOR043W GRE2Q12068 342 aaKnown RBP8.04□□□□□ -1.12
WHI2YOR043W ENP1P38333 483 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms