RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	TY1A-H	P0C2I4	478 aa	Known RBP	5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-A	P0CX57	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-PR1	P0CX58	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-OR	P0CX59	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-PR2	P0CX60	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-DR5	P0CX65	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-ER2	P0CX66	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-GR3	P0CX67	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-LR1	P0CX68	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-MR2	P0CX69	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	ASH1	P34233	588 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	RRN7	P40992	514 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-JR2	P47099	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	HST3	P53687	447 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-DR1	Q03856	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-ML1	Q04706	440 aa	Known RBP	5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-BR	Q12217	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-NL2	Q12470	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	TY1A-GR2	Q12485	440 aa		5.36	□□□□□ -1.55
YKU70	YMR284W	SEC2	P17065	759 aa		5.34	□□□□□ -1.55
YKU70	YMR284W	SET1	P38827	1080 aa	Known RBP	5.34	□□□□□ -1.55
YKU70	YMR284W	AFT1	P22149	690 aa		5.33	□□□□□ -1.56
YKU70	YMR284W	RRD1	P40454	393 aa	Known RBP	5.32	□□□□□ -1.56
YKU70	YMR284W	YDR090C	Q03193	310 aa		5.32	□□□□□ -1.56
YKU70	YMR284W	MET32	Q12041	191 aa		5.3	□□□□□ -1.56
YKU70	YMR284W	YJR115W	P47152	169 aa		5.25	□□□□□ -1.57
YKU70	YMR284W	CAF120	P53836	1060 aa		5.25	□□□□□ -1.57
YKU70	YMR284W	ORC6	P38826	435 aa		5.24	□□□□□ -1.57
YKU70	YMR284W	TRK2	P28584	889 aa		5.23	□□□□□ -1.57
YKU70	YMR284W	ACO2	P39533	789 aa		5.22	□□□□□ -1.57
YKU70	YMR284W	YGR035C	P53222	116 aa		5.21	□□□□□ -1.58
YKU70	YMR284W	MVP1	P40959	511 aa	Known RBP	5.2	□□□□□ -1.58
YKU70	YMR284W	YPR109W	Q06104	294 aa		5.2	□□□□□ -1.58
YKU70	YMR284W	YLR346C	Q06139	101 aa		5.19	□□□□□ -1.58
YKU70	YMR284W	MOD5	P07884	428 aa		5.18	□□□□□ -1.58
YKU70	YMR284W	REF2	P42073	533 aa	Predicted RBP	5.18	□□□□□ -1.58
YKU70	YMR284W	PUS5	Q06244	254 aa		5.18	□□□□□ -1.58
YKU70	YMR284W	KEX2	P13134	814 aa		5.17	□□□□□ -1.58
YKU70	YMR284W	PAC1	P39946	494 aa	Known RBP	5.16	□□□□□ -1.58
YKU70	YMR284W	MSB3	P48566	633 aa	Predicted RBP	5.16	□□□□□ -1.58
YKU70	YMR284W	ERF2	Q06551	359 aa		5.13	□□□□□ -1.59
YKU70	YMR284W	SRF1	Q12516	437 aa		5.13	□□□□□ -1.59
YKU70	YMR284W	RGR1	P19263	1082 aa		5.13	□□□□□ -1.59
YKU70	YMR284W	OPT2	Q06593	877 aa		5.13	□□□□□ -1.59
YKU70	YMR284W	MAK21	Q12176	1025 aa	Known RBP	5.11	□□□□□ -1.59
YKU70	YMR284W	UGA3	P26370	528 aa		5.11	□□□□□ -1.59
YKU70	YMR284W	HPF1	Q05164	967 aa		5.11	□□□□□ -1.59
YKU70	YMR284W	GLY1	P37303	387 aa	Known RBP	5.1	□□□□□ -1.59
YKU70	YMR284W	YPR204W	Q08995	1032 aa		5.1	□□□□□ -1.59
YKU70	YMR284W	PUS1	Q12211	544 aa	Known RBP	5.1	□□□□□ -1.59
YKU70	YMR284W	ICP55	P40051	511 aa		5.09	□□□□□ -1.59
YKU70	YMR284W	PTK2	P47116	818 aa	Known RBP	5.09	□□□□□ -1.59
YKU70	YMR284W	TUB4	P53378	473 aa		5.09	□□□□□ -1.6
YKU70	YMR284W	COX6	P00427	148 aa		5.08	□□□□□ -1.6
YKU70	YMR284W	LSB3	P43603	459 aa	Known RBP	5.08	□□□□□ -1.6
YKU70	YMR284W	SCW11	P53189	542 aa		5.08	□□□□□ -1.6
YKU70	YMR284W	SYH1	Q02875	849 aa	Known RBP	5.08	□□□□□ -1.6
YKU70	YMR284W	YIR007W	P40566	764 aa		5.07	□□□□□ -1.6
YKU70	YMR284W	KXD1	P53158	218 aa		5.07	□□□□□ -1.6
YKU70	YMR284W	AGE1	Q04412	482 aa		5.07	□□□□□ -1.6
YKU70	YMR284W	TYW1	Q08960	810 aa	Known RBP	5.07	□□□□□ -1.6
YKU70	YMR284W	NUP85	P46673	744 aa		5.05	□□□□□ -1.6
YKU70	YMR284W	MIP1	P15801	1254 aa		5.04	□□□□□ -1.6
YKU70	YMR284W	RTF1	P53064	558 aa		5.03	□□□□□ -1.6
YKU70	YMR284W	TPD3	P31383	635 aa		5.02	□□□□□ -1.61
YKU70	YMR284W	PHM7	Q12252	991 aa		5.02	□□□□□ -1.61
YKU70	YMR284W	RTT106	P40161	455 aa		5.01	□□□□□ -1.61
YKU70	YMR284W	YPR148C	Q06523	435 aa		5.01	□□□□□ -1.61
YKU70	YMR284W	TY1A-BL	Q12266	440 aa		5.01	□□□□□ -1.61
YKU70	YMR284W	CLB5	P30283	435 aa		5	□□□□□ -1.61
YKU70	YMR284W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
YKU70	YMR284W	HXT10	P43581	546 aa		5	□□□□□ -1.61
YKU70	YMR284W	YNL115C	P53925	644 aa		4.99	□□□□□ -1.61
YKU70	YMR284W	DPH6	Q12429	685 aa		4.99	□□□□□ -1.61
YKU70	YMR284W	KIP2	P28743	706 aa		4.97	□□□□□ -1.61
YKU70	YMR284W	UBP2	Q01476	1272 aa		4.96	□□□□□ -1.62
YKU70	YMR284W	LSC2	P53312	427 aa		4.95	□□□□□ -1.62
YKU70	YMR284W	PSE1	P32337	1089 aa	Known RBP	4.95	□□□□□ -1.62
YKU70	YMR284W	PDC1	P06169	563 aa	Known RBP	4.93	□□□□□ -1.62
YKU70	YMR284W	MRT4	P33201	236 aa	Known RBP	4.93	□□□□□ -1.62
YKU70	YMR284W	IXR1	P33417	597 aa		4.93	□□□□□ -1.62
YKU70	YMR284W	VPS70	P47161	811 aa		4.93	□□□□□ -1.62
YKU70	YMR284W	ARG82	P07250	355 aa		4.92	□□□□□ -1.62
YKU70	YMR284W	LYS5	P50113	272 aa		4.91	□□□□□ -1.62
YKU70	YMR284W	SIT4	P20604	311 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	MDJ1	P35191	511 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	ROG3	P43602	733 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	ALR1	Q08269	859 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	NSG2	P53898	299 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	TY1A-MR1	Q04215	440 aa		4.88	□□□□□ -1.63
YKU70	YMR284W	AAD14	P42884	376 aa		4.87	□□□□□ -1.63
YKU70	YMR284W	YJR098C	P47139	656 aa		4.86	□□□□□ -1.63
YKU70	YMR284W	RPA14	P50106	137 aa		4.86	□□□□□ -1.63
YKU70	YMR284W	TCB1	Q12466	1186 aa		4.86	□□□□□ -1.63
YKU70	YMR284W	OSH7	P38755	437 aa		4.85	□□□□□ -1.63
YKU70	YMR284W	JJJ3	P47138	172 aa		4.84	□□□□□ -1.63
YKU70	YMR284W	TBF1	Q02457	562 aa		4.84	□□□□□ -1.63
YKU70	YMR284W	CCT8	P47079	568 aa	Known RBP	4.83	□□□□□ -1.64
YKU70	YMR284W	YPR097W	Q06839	1073 aa		4.83	□□□□□ -1.64
YKU70	YMR284W	SBP1	P10080	294 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms