RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C SEC3P33332 1336 aaKnown RBP6.66□□□□□ -1.34
VBA1YMR088C AI4P03878 556 aa6.65□□□□□ -1.34
VBA1YMR088C MPH3P0CE00 602 aa6.65□□□□□ -1.34
VBA1YMR088C TAF13P11747 167 aa6.65□□□□□ -1.34
VBA1YMR088C ETT1Q08421 412 aaKnown RBP6.65□□□□□ -1.34
VBA1YMR088C EAP1P36041 632 aaKnown RBP6.65□□□□□ -1.35
VBA1YMR088C ILV3P39522 585 aaKnown RBP6.65□□□□□ -1.35
VBA1YMR088C YEL023CP39992 682 aa6.65□□□□□ -1.35
VBA1YMR088C PEA2P40091 420 aa6.65□□□□□ -1.35
VBA1YMR088C KIP3P53086 805 aaKnown RBP6.65□□□□□ -1.35
VBA1YMR088C ATF2P53296 535 aa6.65□□□□□ -1.35
VBA1YMR088C DAL5P15365 543 aa6.64□□□□□ -1.35
VBA1YMR088C CLC1P17891 233 aa6.64□□□□□ -1.35
VBA1YMR088C HOS4P40480 1083 aa6.64□□□□□ -1.35
VBA1YMR088C LAM6Q08001 693 aa6.64□□□□□ -1.35
VBA1YMR088C PET111P08468 800 aa6.63□□□□□ -1.35
VBA1YMR088C TRP5P00931 707 aaKnown RBP6.62□□□□□ -1.35
VBA1YMR088C RPT2P40327 437 aaKnown RBP6.62□□□□□ -1.35
VBA1YMR088C SEC20P28791 383 aa6.61□□□□□ -1.35
VBA1YMR088C PSE1P32337 1089 aaKnown RBP6.61□□□□□ -1.35
VBA1YMR088C MSH4P40965 878 aaPredicted RBP6.61□□□□□ -1.35
VBA1YMR088C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VBA1YMR088C SPP1Q03012 353 aa6.61□□□□□ -1.35
VBA1YMR088C BUD21Q08492 214 aaPredicted RBP6.61□□□□□ -1.35
VBA1YMR088C CBF5P33322 483 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VBA1YMR088C ORC6P38826 435 aa6.61□□□□□ -1.35
VBA1YMR088C DOS2P54858 310 aa6.61□□□□□ -1.35
VBA1YMR088C GEF1P37020 779 aa6.6□□□□□ -1.35
VBA1YMR088C PTC4P38089 393 aa6.6□□□□□ -1.35
VBA1YMR088C TIF11P38912 153 aaKnown RBP6.6□□□□□ -1.35
VBA1YMR088C SEC9P40357 651 aa6.6□□□□□ -1.35
VBA1YMR088C DAN4P47179 1161 aa6.6□□□□□ -1.35
VBA1YMR088C FAR11P53917 953 aa6.59□□□□□ -1.35
VBA1YMR088C APL5Q08951 932 aaKnown RBP6.59□□□□□ -1.35
VBA1YMR088C MCM1P11746 286 aa6.58□□□□□ -1.36
VBA1YMR088C ULI1P43604 169 aa6.58□□□□□ -1.36
VBA1YMR088C TY4A-JP47023 414 aa6.58□□□□□ -1.36
VBA1YMR088C SLI15P38283 698 aa6.58□□□□□ -1.36
VBA1YMR088C TAN1P53072 289 aaPredicted RBP6.58□□□□□ -1.36
VBA1YMR088C JIP4Q03361 876 aa6.58□□□□□ -1.36
VBA1YMR088C LTV1P34078 463 aa6.57□□□□□ -1.36
VBA1YMR088C RRP14P36080 434 aaKnown RBP6.57□□□□□ -1.36
VBA1YMR088C RCF1Q03713 159 aa6.57□□□□□ -1.36
VBA1YMR088C YML020WQ03722 664 aa6.57□□□□□ -1.36
VBA1YMR088C BRE1Q07457 700 aaKnown RBP6.57□□□□□ -1.36
VBA1YMR088C PDR1P12383 1068 aa6.56□□□□□ -1.36
VBA1YMR088C GUA1P38625 525 aaKnown RBP6.56□□□□□ -1.36
VBA1YMR088C ZDS1P50111 915 aaKnown RBP6.56□□□□□ -1.36
VBA1YMR088C NOP8Q08287 484 aaPredicted RBP6.56□□□□□ -1.36
VBA1YMR088C CFT2Q12102 859 aaPredicted RBP6.56□□□□□ -1.36
VBA1YMR088C RAD2P07276 1031 aa6.55□□□□□ -1.36
VBA1YMR088C DJP1P40564 432 aa6.55□□□□□ -1.36
VBA1YMR088C NOP7P53261 605 aaKnown RBP6.55□□□□□ -1.36
VBA1YMR088C RPN7Q06103 429 aaKnown RBP6.55□□□□□ -1.36
VBA1YMR088C IOC2Q12072 812 aa6.55□□□□□ -1.36
VBA1YMR088C SSF1P38789 453 aaPredicted RBP6.55□□□□□ -1.36
VBA1YMR088C YJR008WP47085 338 aa6.55□□□□□ -1.36
VBA1YMR088C RGR1P19263 1082 aa6.54□□□□□ -1.36
VBA1YMR088C YLL054CQ12244 843 aa6.54□□□□□ -1.36
VBA1YMR088C SKI3P17883 1432 aaKnown RBP6.53□□□□□ -1.36
VBA1YMR088C GAP1P19145 602 aaPredicted RBP6.53□□□□□ -1.36
VBA1YMR088C PKH1Q03407 766 aa6.53□□□□□ -1.36
VBA1YMR088C ECM16Q04217 1267 aaKnown RBP6.53□□□□□ -1.36
VBA1YMR088C TY1B-AO13527 1196 aaKnown RBP6.52□□□□□ -1.37
VBA1YMR088C MSH3P25336 1018 aa6.52□□□□□ -1.37
VBA1YMR088C SAP190P36123 1033 aa6.52□□□□□ -1.37
VBA1YMR088C MVP1P40959 511 aaKnown RBP6.52□□□□□ -1.37
VBA1YMR088C LEM3P42838 414 aa6.52□□□□□ -1.37
VBA1YMR088C YDR341CQ05506 607 aaKnown RBP6.52□□□□□ -1.37
VBA1YMR088C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
VBA1YMR088C AIM21P40563 679 aa6.52□□□□□ -1.37
VBA1YMR088C MTR4P47047 1073 aaKnown RBP6.52□□□□□ -1.37
VBA1YMR088C TEA1P47988 759 aa6.52□□□□□ -1.37
VBA1YMR088C RPP1BP10622 106 aaKnown RBP6.51□□□□□ -1.37
VBA1YMR088C YMR124WP39523 943 aaKnown RBP6.51□□□□□ -1.37
VBA1YMR088C SEC27P41811 889 aaKnown RBP6.51□□□□□ -1.37
VBA1YMR088C YNL035CP53962 389 aaKnown RBP6.51□□□□□ -1.37
VBA1YMR088C MEH1Q02205 184 aa6.51□□□□□ -1.37
VBA1YMR088C PRP3Q03338 469 aaPredicted RBP6.51□□□□□ -1.37
VBA1YMR088C CEF1Q03654 590 aaPredicted RBP6.51□□□□□ -1.37
VBA1YMR088C CDC73Q06697 393 aa6.51□□□□□ -1.37
VBA1YMR088C IMH1Q06704 911 aaKnown RBP6.51□□□□□ -1.37
VBA1YMR088C PSK2Q08217 1101 aa6.51□□□□□ -1.37
VBA1YMR088C RAD51P25454 400 aa6.5□□□□□ -1.37
VBA1YMR088C GIR2Q03768 265 aaPredicted RBP6.5□□□□□ -1.37
VBA1YMR088C CSC1Q06538 782 aa6.5□□□□□ -1.37
VBA1YMR088C LDB19Q12502 818 aa6.5□□□□□ -1.37
VBA1YMR088C SSA4P22202 642 aaKnown RBP6.49□□□□□ -1.37
VBA1YMR088C DEP1P31385 405 aa6.49□□□□□ -1.37
VBA1YMR088C SPC42P36094 363 aa6.49□□□□□ -1.37
VBA1YMR088C AIM20P40451 204 aa6.49□□□□□ -1.37
VBA1YMR088C HGH1P48362 394 aaKnown RBP6.49□□□□□ -1.37
VBA1YMR088C HPC2Q01448 625 aa6.49□□□□□ -1.37
VBA1YMR088C SYH1Q02875 849 aaKnown RBP6.49□□□□□ -1.37
VBA1YMR088C YLR257WQ06146 321 aaKnown RBP6.49□□□□□ -1.37
VBA1YMR088C CLB5P30283 435 aa6.49□□□□□ -1.37
VBA1YMR088C BYE1P36106 594 aa6.49□□□□□ -1.37
VBA1YMR088C FKH1P40466 484 aa6.49□□□□□ -1.37
VBA1YMR088C RSC8P43609 557 aaKnown RBP6.49□□□□□ -1.37
VBA1YMR088C VID30P53076 958 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms