RNA–Protein interactions for RNA: YLR450W

HMG2, Transcript of HMG-CoA reductase, yeastyeast

Gene HMG2, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMG2YLR450W LEM3P42838 414 aa10.48□□□□□ -0.73
HMG2YLR450W SRB8P25648 1427 aa10.48□□□□□ -0.73
HMG2YLR450W RIM101P33400 625 aa10.48□□□□□ -0.73
HMG2YLR450W PSD2P53037 1138 aaKnown RBP10.47□□□□□ -0.73
HMG2YLR450W NOT3P06102 836 aaKnown RBP10.47□□□□□ -0.73
HMG2YLR450W RAD51P25454 400 aa10.46□□□□□ -0.73
HMG2YLR450W RSC1P53236 928 aa10.46□□□□□ -0.73
HMG2YLR450W SPT16P32558 1035 aaKnown RBP10.46□□□□□ -0.74
HMG2YLR450W CLB1P24868 471 aa10.45□□□□□ -0.74
HMG2YLR450W APL5Q08951 932 aaKnown RBP10.45□□□□□ -0.74
HMG2YLR450W IKI3Q06706 1349 aaKnown RBP10.45□□□□□ -0.74
HMG2YLR450W KNS1P32350 737 aaPredicted RBP10.44□□□□□ -0.74
HMG2YLR450W YLL054CQ12244 843 aa10.44□□□□□ -0.74
HMG2YLR450W DSF2P38213 736 aa10.44□□□□□ -0.74
HMG2YLR450W BDP1P46678 594 aa10.44□□□□□ -0.74
HMG2YLR450W PEA2P40091 420 aa10.43□□□□□ -0.74
HMG2YLR450W SPB4P25808 606 aaPredicted RBP10.42□□□□□ -0.74
HMG2YLR450W SRP54P20424 541 aaKnown RBP10.42□□□□□ -0.74
HMG2YLR450W RAD2P07276 1031 aa10.41□□□□□ -0.74
HMG2YLR450W TY1B-JR2P47100 1755 aaKnown RBP10.41□□□□□ -0.74
HMG2YLR450W TY1B-ER2Q03619 1755 aa10.41□□□□□ -0.74
HMG2YLR450W TY1B-MR1Q04214 1755 aa10.41□□□□□ -0.74
HMG2YLR450W TY1B-MR2Q04670 1755 aaKnown RBP10.41□□□□□ -0.74
HMG2YLR450W TY1B-LR1Q12088 1755 aaKnown RBP10.41□□□□□ -0.74
HMG2YLR450W TY1B-NL1Q12112 1755 aa10.41□□□□□ -0.74
HMG2YLR450W TY1B-GR1Q12141 1755 aa10.41□□□□□ -0.74
HMG2YLR450W TY1B-BLQ12490 1755 aa10.41□□□□□ -0.74
HMG2YLR450W PDR10P51533 1564 aa10.4□□□□□ -0.74
HMG2YLR450W PCT1P13259 424 aa10.4□□□□□ -0.74
HMG2YLR450W RPC82P32349 654 aa10.4□□□□□ -0.74
HMG2YLR450W PUP2P32379 260 aa10.4□□□□□ -0.74
HMG2YLR450W YIR014WP40570 242 aa10.39□□□□□ -0.75
HMG2YLR450W MGA2P40578 1113 aa10.39□□□□□ -0.75
HMG2YLR450W RRP15Q06511 250 aaPredicted RBP10.39□□□□□ -0.75
HMG2YLR450W ARL1P38116 183 aaKnown RBP10.38□□□□□ -0.75
HMG2YLR450W TPM2P40414 161 aa10.38□□□□□ -0.75
HMG2YLR450W ALD3P54114 506 aa10.38□□□□□ -0.75
HMG2YLR450W ERV41Q04651 352 aa10.38□□□□□ -0.75
HMG2YLR450W SNQ2P32568 1501 aaKnown RBP10.38□□□□□ -0.75
HMG2YLR450W SSM4P40318 1319 aa10.38□□□□□ -0.75
HMG2YLR450W ITC1P53125 1264 aa10.38□□□□□ -0.75
HMG2YLR450W COG8Q04632 607 aa10.38□□□□□ -0.75
HMG2YLR450W RPA190P10964 1664 aaKnown RBP10.37□□□□□ -0.75
HMG2YLR450W PAN1P32521 1480 aa10.37□□□□□ -0.75
HMG2YLR450W UBP10P53874 792 aaPredicted RBP10.37□□□□□ -0.75
HMG2YLR450W EDE1P34216 1381 aa10.37□□□□□ -0.75
HMG2YLR450W MSP1P28737 362 aa10.36□□□□□ -0.75
HMG2YLR450W AIM20P40451 204 aa10.36□□□□□ -0.75
HMG2YLR450W UTP13Q05946 817 aaKnown RBP10.36□□□□□ -0.75
HMG2YLR450W ULS1Q08562 1619 aa10.35□□□□□ -0.75
HMG2YLR450W PET111P08468 800 aa10.35□□□□□ -0.75
HMG2YLR450W KIP3P53086 805 aaKnown RBP10.35□□□□□ -0.75
HMG2YLR450W NOP14Q99207 810 aaKnown RBP10.35□□□□□ -0.75
HMG2YLR450W ESC1Q03661 1658 aaKnown RBP10.35□□□□□ -0.75
HMG2YLR450W PSE1P32337 1089 aaKnown RBP10.34□□□□□ -0.75
HMG2YLR450W MLP2P40457 1679 aa10.34□□□□□ -0.75
HMG2YLR450W PHO87P25360 923 aa10.34□□□□□ -0.75
HMG2YLR450W YLR419WQ06698 1435 aaKnown RBP10.34□□□□□ -0.75
HMG2YLR450W MPP10P47083 593 aaKnown RBP10.33□□□□□ -0.76
HMG2YLR450W VPS60Q03390 229 aa10.33□□□□□ -0.76
HMG2YLR450W VTH1P40438 1549 aa10.33□□□□□ -0.76
HMG2YLR450W VTH2P40890 1549 aa10.33□□□□□ -0.76
HMG2YLR450W NFI1Q12216 726 aa10.33□□□□□ -0.76
HMG2YLR450W ISW1P38144 1129 aa10.33□□□□□ -0.76
HMG2YLR450W SWI3P32591 825 aa10.32□□□□□ -0.76
HMG2YLR450W YVC1Q12324 675 aa10.32□□□□□ -0.76
HMG2YLR450W CIN4P39110 191 aa10.32□□□□□ -0.76
HMG2YLR450W VID30P53076 958 aa10.32□□□□□ -0.76
HMG2YLR450W SPT5P27692 1063 aaKnown RBP10.31□□□□□ -0.76
HMG2YLR450W SWH1P35845 1188 aa10.31□□□□□ -0.76
HMG2YLR450W DNF1P32660 1571 aa10.31□□□□□ -0.76
HMG2YLR450W MDM38Q08179 573 aa10.31□□□□□ -0.76
HMG2YLR450W NOP56Q12460 504 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76 RIP-Chip
HMG2YLR450W DAL5P15365 543 aa10.31□□□□□ -0.76
HMG2YLR450W CDC11P32458 415 aa10.31□□□□□ -0.76
HMG2YLR450W VPS24P36095 224 aaKnown RBP10.31□□□□□ -0.76
HMG2YLR450W RNT1Q02555 471 aa10.31□□□□□ -0.76
HMG2YLR450W APL6P46682 809 aa10.29□□□□□ -0.76
HMG2YLR450W VPS72Q03388 795 aa10.29□□□□□ -0.76
HMG2YLR450W SLP1Q12232 587 aa10.29□□□□□ -0.76
HMG2YLR450W YMR1P47147 688 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
HMG2YLR450W NTE1Q04958 1679 aa10.29□□□□□ -0.76
HMG2YLR450W TSC11P40061 1430 aa10.28□□□□□ -0.76
HMG2YLR450W SNT2P53127 1403 aa10.28□□□□□ -0.76
HMG2YLR450W ABP1P15891 592 aaKnown RBP10.28□□□□□ -0.76
HMG2YLR450W TAF13P11747 167 aa10.28□□□□□ -0.76
HMG2YLR450W RPO21P04050 1733 aaKnown RBP10.27□□□□□ -0.76
HMG2YLR450W ZUO1P32527 433 aaKnown RBP10.27□□□□□ -0.76
HMG2YLR450W YMR124WP39523 943 aaKnown RBP10.27□□□□□ -0.77
HMG2YLR450W SIT1P39980 628 aa10.27□□□□□ -0.77
HMG2YLR450W PIM1P36775 1133 aa10.27□□□□□ -0.77
HMG2YLR450W CHZ1P40019 153 aaPredicted RBP10.27□□□□□ -0.77
HMG2YLR450W PUS1Q12211 544 aaKnown RBP10.27□□□□□ -0.77
HMG2YLR450W VPS30Q02948 557 aa10.26□□□□□ -0.77
HMG2YLR450W VPS5Q92331 675 aa10.26□□□□□ -0.77
HMG2YLR450W LAM1P38851 1228 aa10.26□□□□□ -0.77
HMG2YLR450W YGL140CP53120 1219 aa10.25□□□□□ -0.77
HMG2YLR450W TPO2P53283 614 aa10.25□□□□□ -0.77
HMG2YLR450W YMR102CQ03177 834 aa10.25□□□□□ -0.77
HMG2YLR450W NDL1Q06568 189 aa10.24□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms