RNA–Protein interactions for RNA: YLR410W-B

YLR410W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR410W-B, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-BYLR410W-B RAD54P32863 898 aa3.96□□□□□ -1.78
YLR410W-BYLR410W-B STM1P39015 273 aaKnown RBP3.96□□□□□ -1.78
YLR410W-BYLR410W-B ILV3P39522 585 aaKnown RBP3.96□□□□□ -1.78
YLR410W-BYLR410W-B CST6P40535 587 aa3.95□□□□□ -1.78
YLR410W-BYLR410W-B SIS2P36024 562 aa3.95□□□□□ -1.78
YLR410W-BYLR410W-B UBP10P53874 792 aaPredicted RBP3.95□□□□□ -1.78
YLR410W-BYLR410W-B CWC15Q03772 175 aaKnown RBP3.94□□□□□ -1.78
YLR410W-BYLR410W-B ITT1Q04638 464 aa3.94□□□□□ -1.78
YLR410W-BYLR410W-B HAA1Q12753 694 aaKnown RBP3.94□□□□□ -1.78
YLR410W-BYLR410W-B SWE1P32944 819 aa3.94□□□□□ -1.78
YLR410W-BYLR410W-B PKH3Q03306 898 aaPredicted RBP3.94□□□□□ -1.78
YLR410W-BYLR410W-B MAK16P10962 306 aaPredicted RBP3.93□□□□□ -1.78
YLR410W-BYLR410W-B NSR1P27476 414 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
YLR410W-BYLR410W-B ASF1P32447 279 aa3.93□□□□□ -1.78
YLR410W-BYLR410W-B MMP1Q12372 583 aa3.93□□□□□ -1.78
YLR410W-BYLR410W-B YAF9P53930 226 aa3.93□□□□□ -1.78
YLR410W-BYLR410W-B GRE2Q12068 342 aaKnown RBP3.93□□□□□ -1.78
YLR410W-BYLR410W-B SAM3Q08986 587 aa3.93□□□□□ -1.78
YLR410W-BYLR410W-B SEC20P28791 383 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B YHL050CP38721 697 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B YHR219WP38900 624 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B YEL077CQ3E7X8 1277 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B KIC1P38692 1080 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B FPR4Q06205 392 aaPredicted RBP3.92□□□□□ -1.78
YLR410W-BYLR410W-B CLB5P30283 435 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B ATH1P48016 1211 aa3.92□□□□□ -1.78
YLR410W-BYLR410W-B POL32P47110 350 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B PIB1Q06651 286 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B SPT5P27692 1063 aaKnown RBP3.91□□□□□ -1.78
YLR410W-BYLR410W-B PPX1P38698 397 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B YJR107WP47145 328 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B SLX5P32828 619 aaKnown RBP3.91□□□□□ -1.78
YLR410W-BYLR410W-B SEC8P32855 1065 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B NMD2P38798 1089 aaKnown RBP3.91□□□□□ -1.78
YLR410W-BYLR410W-B ECM23Q02710 187 aa3.91□□□□□ -1.78
YLR410W-BYLR410W-B BOL3P39724 118 aa3.9□□□□□ -1.78
YLR410W-BYLR410W-B SVF1Q05515 481 aa3.9□□□□□ -1.78
YLR410W-BYLR410W-B IOC3P43596 787 aa3.9□□□□□ -1.79
YLR410W-BYLR410W-B NUG1P40010 520 aaKnown RBP3.9□□□□□ -1.79
YLR410W-BYLR410W-B FRT1Q99332 602 aa3.9□□□□□ -1.79
YLR410W-BYLR410W-B GAL2P13181 574 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B MET4P32389 672 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B NNF1P47149 201 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B ARG8P18544 423 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B RNH70P53331 553 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B URN1Q06525 465 aaKnown RBP3.89□□□□□ -1.79
YLR410W-BYLR410W-B YPR109WQ06104 294 aa3.89□□□□□ -1.79
YLR410W-BYLR410W-B OYE2Q03558 400 aaKnown RBP3.88□□□□□ -1.79
YLR410W-BYLR410W-B YOL098CQ12496 1037 aa3.88□□□□□ -1.79
YLR410W-BYLR410W-B YJR008WP47085 338 aa3.88□□□□□ -1.79
YLR410W-BYLR410W-B CIT2P08679 460 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B FYV10P40492 516 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B ALD3P54114 506 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B UBX5Q06682 500 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B MCM16Q12262 181 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B YMR196WQ04336 1088 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B UBX7P38349 436 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B MNL2Q12205 849 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B SLI15P38283 698 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B NAF1P53919 492 aaKnown RBP3.87□□□□□ -1.79
YLR410W-BYLR410W-B PUF6Q04373 656 aaKnown RBP3.87□□□□□ -1.79
YLR410W-BYLR410W-B NUT2Q06213 157 aa3.87□□□□□ -1.79
YLR410W-BYLR410W-B MPH3P0CE00 602 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B ATG1P53104 897 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B AI4P03878 556 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B MET1P36150 593 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B BUD6P41697 788 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B KAR5Q04746 504 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B APL6P46682 809 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B ROM1P53046 1155 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B CSC1Q06538 782 aa3.86□□□□□ -1.79
YLR410W-BYLR410W-B GRS1P38088 690 aaKnown RBP3.86□□□□□ -1.79
YLR410W-BYLR410W-B KTR7P40504 517 aa3.85□□□□□ -1.79
YLR410W-BYLR410W-B JSN1P47135 1091 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
YLR410W-BYLR410W-B TAT2P38967 592 aa3.85□□□□□ -1.79
YLR410W-BYLR410W-B TPO2P53283 614 aa3.85□□□□□ -1.79
YLR410W-BYLR410W-B GPI13Q07830 1017 aa3.85□□□□□ -1.79
YLR410W-BYLR410W-B RTS3P53289 263 aa3.84□□□□□ -1.79
YLR410W-BYLR410W-B JIP5Q06214 492 aaPredicted RBP3.84□□□□□ -1.79
YLR410W-BYLR410W-B CDC73Q06697 393 aa3.84□□□□□ -1.79
YLR410W-BYLR410W-B ISF1P32488 338 aa3.84□□□□□ -1.8
YLR410W-BYLR410W-B PNP1Q05788 311 aa3.84□□□□□ -1.8
YLR410W-BYLR410W-B YPR084WQ06821 456 aa3.84□□□□□ -1.8
YLR410W-BYLR410W-B ACS2P52910 683 aaKnown RBP3.84□□□□□ -1.8
YLR410W-BYLR410W-B SSF2Q12153 453 aaPredicted RBP3.84□□□□□ -1.8
YLR410W-BYLR410W-B GYP5Q12344 894 aa3.84□□□□□ -1.8
YLR410W-BYLR410W-B YAP5P40574 245 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B ALG12P53730 551 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B TRM1P15565 570 aaKnown RBP3.83□□□□□ -1.8
YLR410W-BYLR410W-B VAC8P39968 578 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B VPS16Q03308 798 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B YPP1P46951 817 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B RPN4Q03465 531 aa3.83□□□□□ -1.8
YLR410W-BYLR410W-B SLY41P22215 453 aa3.82□□□□□ -1.8
YLR410W-BYLR410W-B TFB4Q12004 338 aa3.82□□□□□ -1.8
YLR410W-BYLR410W-B SUV3P32580 737 aa3.82□□□□□ -1.8
YLR410W-BYLR410W-B ACF4P47129 309 aa3.82□□□□□ -1.8
YLR410W-BYLR410W-B ALD6P54115 500 aaKnown RBP3.82□□□□□ -1.8
YLR410W-BYLR410W-B SPR28Q04921 423 aa3.82□□□□□ -1.8
YLR410W-BYLR410W-B BUB1P41695 1021 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms