RNA–Protein interactions for RNA: YLR212C

TUB4, Transcript of Gamma-tubulin, yeast

Gene TUB4, Length 1,422 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB4	YLR212C	AVT3	P36062	692 aa		12.2	□□□□□ -0.46
TUB4	YLR212C	ENV9	Q08651	330 aa		12.18	□□□□□ -0.46
TUB4	YLR212C	NAP1	P25293	417 aa	Known RBP	12.17	□□□□□ -0.46
TUB4	YLR212C	TAF8	Q03750	510 aa		12.17	□□□□□ -0.46
TUB4	YLR212C	ESL2	P36168	1195 aa		12.15	□□□□□ -0.46
TUB4	YLR212C	TAF5	P38129	798 aa		12.15	□□□□□ -0.46
TUB4	YLR212C	CPS1	P27614	576 aa		12.13	□□□□□ -0.47
TUB4	YLR212C	RCM1	P53972	490 aa		12.12	□□□□□ -0.47
TUB4	YLR212C	YMR074C	Q04773	145 aa		12.12	□□□□□ -0.47
TUB4	YLR212C	IMH1	Q06704	911 aa	Known RBP	12.11	□□□□□ -0.47
TUB4	YLR212C	PRP45	P28004	379 aa	Predicted RBP	12.09	□□□□□ -0.47
TUB4	YLR212C	RRP5	Q05022	1729 aa	Known RBP	12.08	□□□□□ -0.48
TUB4	YLR212C	PPH3	P32345	308 aa		12.07	□□□□□ -0.48
TUB4	YLR212C	PRP5	P21372	849 aa	Predicted RBP	12.01	□□□□□ -0.49
TUB4	YLR212C	YRF1-2	P40105	1681 aa		12	□□□□□ -0.49
TUB4	YLR212C	SPE2	P21182	396 aa		11.98	□□□□□ -0.49
TUB4	YLR212C	PSK1	P31374	1356 aa		11.97	□□□□□ -0.49
TUB4	YLR212C	ADE6	P38972	1358 aa	Known RBP	11.97	□□□□□ -0.49
TUB4	YLR212C	BUD31	P25337	157 aa	Predicted RBP	11.97	□□□□□ -0.49
TUB4	YLR212C	KIP3	P53086	805 aa	Known RBP	11.97	□□□□□ -0.49
TUB4	YLR212C	TY4B-H	P0C2J7	1802 aa		11.96	□□□□□ -0.5
TUB4	YLR212C	TY4B-J	P47024	1803 aa		11.96	□□□□□ -0.5
TUB4	YLR212C	MSB3	P48566	633 aa	Predicted RBP	11.94	□□□□□ -0.5
TUB4	YLR212C	ORC1	P54784	914 aa	Predicted RBP	11.92	□□□□□ -0.5
TUB4	YLR212C	LEU3	P08638	886 aa		11.91	□□□□□ -0.5
TUB4	YLR212C	IES2	P40154	320 aa		11.88	□□□□□ -0.51
TUB4	YLR212C	CHZ1	P40019	153 aa	Predicted RBP	11.87	□□□□□ -0.51
TUB4	YLR212C	DOT5	P40553	215 aa		11.86	□□□□□ -0.51
TUB4	YLR212C	TCB1	Q12466	1186 aa		11.86	□□□□□ -0.51
TUB4	YLR212C	LEU2	P04173	364 aa	Predicted RBP	11.86	□□□□□ -0.51
TUB4	YLR212C	PRP43	P53131	767 aa	Known RBP	11.86	□□□□□ -0.51
TUB4	YLR212C	CSE4	P36012	229 aa		11.85	□□□□□ -0.51
TUB4	YLR212C	RPN11	P43588	306 aa	Known RBP	11.85	□□□□□ -0.51
TUB4	YLR212C	MTR4	P47047	1073 aa	Known RBP	11.85	□□□□□ -0.51
TUB4	YLR212C	SLM3	Q12093	417 aa		11.85	□□□□□ -0.51
TUB4	YLR212C	URB1	P34241	1764 aa	Known RBP	11.84	□□□□□ -0.51
TUB4	YLR212C	UBP1	P25037	809 aa		11.84	□□□□□ -0.51
TUB4	YLR212C	YLR419W	Q06698	1435 aa	Known RBP	11.83	□□□□□ -0.52
TUB4	YLR212C	RSF2	P46974	1380 aa		11.83	□□□□□ -0.52
TUB4	YLR212C	RPS24A	P0CX31	135 aa	Known RBP	11.83	□□□□□ -0.52
TUB4	YLR212C	RPS24B	P0CX32	135 aa	Known RBP	11.83	□□□□□ -0.52
TUB4	YLR212C	FOX2	Q02207	900 aa	Known RBP	11.8	□□□□□ -0.52
TUB4	YLR212C	ROM2	P51862	1356 aa	Known RBP	11.8	□□□□□ -0.52
TUB4	YLR212C	YML133C	Q03099	1374 aa		11.76	□□□□□ -0.53
TUB4	YLR212C	YLL067C	Q07888	1374 aa		11.76	□□□□□ -0.53
TUB4	YLR212C	YLL066C	Q99208	1374 aa		11.76	□□□□□ -0.53
TUB4	YLR212C	NPR2	P39923	615 aa		11.76	□□□□□ -0.53
TUB4	YLR212C	SCT1	P32784	759 aa		11.75	□□□□□ -0.53
TUB4	YLR212C	YBL086C	P38177	466 aa		11.75	□□□□□ -0.53
TUB4	YLR212C	TSR3	Q12094	313 aa	Known RBP	11.75	□□□□□ -0.53
TUB4	YLR212C	FKS3	Q04952	1785 aa		11.74	□□□□□ -0.53
TUB4	YLR212C	EDE1	P34216	1381 aa		11.74	□□□□□ -0.53
TUB4	YLR212C	YEF3	P16521	1044 aa	Known RBP	11.74	□□□□□ -0.53
TUB4	YLR212C	XKS1	P42826	600 aa		11.74	□□□□□ -0.53
TUB4	YLR212C	YKL133C	P36066	463 aa		11.73	□□□□□ -0.53
TUB4	YLR212C	ENP1	P38333	483 aa	Known RBP	11.73	□□□□□ -0.53
TUB4	YLR212C	YJL181W	P46987	611 aa		11.73	□□□□□ -0.53
TUB4	YLR212C	LYS4	P49367	693 aa	Predicted RBP	11.73	□□□□□ -0.53
TUB4	YLR212C	YRF1-3	P0CX14	1859 aa		11.72	□□□□□ -0.53
TUB4	YLR212C	YRF1-7	P0CX15	1859 aa		11.72	□□□□□ -0.53
TUB4	YLR212C	YRF1-6	P53819	1859 aa		11.72	□□□□□ -0.53
TUB4	YLR212C	COB	P00163	385 aa		11.69	□□□□□ -0.54
TUB4	YLR212C	GTT3	P39996	337 aa		11.69	□□□□□ -0.54
TUB4	YLR212C	LAM6	Q08001	693 aa		11.69	□□□□□ -0.54
TUB4	YLR212C	PRP40	P33203	583 aa	Known RBP	11.69	□□□□□ -0.54
TUB4	YLR212C	UGA2	P38067	497 aa		11.69	□□□□□ -0.54
TUB4	YLR212C	YIL177C	P40434	1758 aa		11.68	□□□□□ -0.54
TUB4	YLR212C	YJL225C	P40889	1758 aa		11.68	□□□□□ -0.54
TUB4	YLR212C	YKR075C	P36155	307 aa		11.67	□□□□□ -0.54
TUB4	YLR212C	FKH1	P40466	484 aa		11.67	□□□□□ -0.54
TUB4	YLR212C	APC1	P53886	1748 aa		11.66	□□□□□ -0.54
TUB4	YLR212C	ALD2	P47771	506 aa		11.66	□□□□□ -0.54
TUB4	YLR212C	GAS4	Q08271	471 aa		11.66	□□□□□ -0.54
TUB4	YLR212C	DPS1	P04802	557 aa	Known RBP	11.65	□□□□□ -0.54
TUB4	YLR212C	YRF1-4	O13559	1382 aa		11.65	□□□□□ -0.54
TUB4	YLR212C	SSA2	P10592	639 aa	Known RBP	11.64	□□□□□ -0.55
TUB4	YLR212C	MLP1	Q02455	1875 aa	Known RBP	11.64	□□□□□ -0.55
TUB4	YLR212C	CTH1	P47976	325 aa		11.63	□□□□□ -0.55
TUB4	YLR212C	PDI1	P17967	522 aa	Known RBP	11.61	□□□□□ -0.55
TUB4	YLR212C	RTG3	P38165	486 aa		11.61	□□□□□ -0.55
TUB4	YLR212C	RTF1	P53064	558 aa		11.61	□□□□□ -0.55
TUB4	YLR212C	RCR1	P38212	213 aa		11.6	□□□□□ -0.55
TUB4	YLR212C	FRK1	Q03002	865 aa	Predicted RBP	11.6	□□□□□ -0.55
TUB4	YLR212C	RPL17A	P05740	184 aa	Known RBP	11.59	□□□□□ -0.55
TUB4	YLR212C	RPL17B	P46990	184 aa	Known RBP	11.59	□□□□□ -0.55
TUB4	YLR212C	MEC3	Q02574	474 aa		11.59	□□□□□ -0.55
TUB4	YLR212C	SIR4	P11978	1358 aa		11.57	□□□□□ -0.56
TUB4	YLR212C	ADE16	P54113	591 aa	Known RBP	11.57	□□□□□ -0.56
TUB4	YLR212C	HAA1	Q12753	694 aa	Known RBP	11.57	□□□□□ -0.56
TUB4	YLR212C	AUS1	Q08409	1394 aa		11.56	□□□□□ -0.56
TUB4	YLR212C	POL5	P39985	1022 aa	Known RBP	11.54	□□□□□ -0.56
TUB4	YLR212C	TAP42	Q04372	366 aa		11.54	□□□□□ -0.56
TUB4	YLR212C	GRX4	P32642	244 aa		11.53	□□□□□ -0.56
TUB4	YLR212C	SNF2	P22082	1703 aa		11.53	□□□□□ -0.56
TUB4	YLR212C	HIM1	Q06674	414 aa		11.52	□□□□□ -0.56
TUB4	YLR212C	SEC3	P33332	1336 aa	Known RBP	11.52	□□□□□ -0.57
TUB4	YLR212C	MHP1	P43638	1398 aa		11.52	□□□□□ -0.57
TUB4	YLR212C	PDS5	Q04264	1277 aa		11.52	□□□□□ -0.57
TUB4	YLR212C	RPO41	P13433	1351 aa	Known RBP	11.51	□□□□□ -0.57
TUB4	YLR212C	SSA1	P10591	642 aa	Known RBP	11.51	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 84 ms