RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W YGL015CP33199 130 aa8.24□□□□□ -1.09
SEC13YLR208W CFT1Q06632 1357 aaKnown RBP8.23□□□□□ -1.09
SEC13YLR208W BUD21Q08492 214 aaPredicted RBP8.23□□□□□ -1.09
SEC13YLR208W ENT1Q12518 454 aa8.22□□□□□ -1.09
SEC13YLR208W ENV9Q08651 330 aa8.2□□□□□ -1.1
SEC13YLR208W YNR029CP53729 429 aaKnown RBP8.19□□□□□ -1.1
SEC13YLR208W DCD1P06773 312 aa8.18□□□□□ -1.1
SEC13YLR208W OXP1P28273 1286 aa8.18□□□□□ -1.1
SEC13YLR208W RIA1P53893 1110 aa8.18□□□□□ -1.1
SEC13YLR208W IMH1Q06704 911 aaKnown RBP8.16□□□□□ -1.1
SEC13YLR208W SSA1P10591 642 aaKnown RBP8.1□□□□□ -1.11
SEC13YLR208W MRX12P47084 519 aa8.1□□□□□ -1.11
SEC13YLR208W GCN2P15442 1659 aa8.09□□□□□ -1.11
SEC13YLR208W TY3B-IQ7LHG5 1498 aaKnown RBP8.09□□□□□ -1.11
SEC13YLR208W UBP10P53874 792 aaPredicted RBP8.07□□□□□ -1.12
SEC13YLR208W YRF1-2P40105 1681 aa8.06□□□□□ -1.12
SEC13YLR208W RRD1P40454 393 aaKnown RBP8.06□□□□□ -1.12
SEC13YLR208W YBL086CP38177 466 aa8.05□□□□□ -1.12
SEC13YLR208W RRP5Q05022 1729 aaKnown RBP8.02□□□□□ -1.13
SEC13YLR208W BCH2P36122 765 aa8.01□□□□□ -1.13
SEC13YLR208W MAP2P38174 421 aaKnown RBP8.01□□□□□ -1.13
SEC13YLR208W NUP192P47054 1683 aa8.01□□□□□ -1.13
SEC13YLR208W UBP1P25037 809 aa8□□□□□ -1.13
SEC13YLR208W RPN11P43588 306 aaKnown RBP7.99□□□□□ -1.13
SEC13YLR208W RSM7P47150 247 aa7.99□□□□□ -1.13
SEC13YLR208W SSP1P38871 571 aa7.98□□□□□ -1.13
SEC13YLR208W CAB1Q04430 367 aa7.98□□□□□ -1.13
SEC13YLR208W RAD9P14737 1309 aa7.97□□□□□ -1.13
SEC13YLR208W PRP45P28004 379 aaPredicted RBP7.95□□□□□ -1.14
SEC13YLR208W UGA2P38067 497 aa7.95□□□□□ -1.14
SEC13YLR208W SCY1P53009 804 aa7.95□□□□□ -1.14
SEC13YLR208W LYS4P49367 693 aaPredicted RBP7.94□□□□□ -1.14
SEC13YLR208W LEU3P08638 886 aa7.93□□□□□ -1.14
SEC13YLR208W NPR2P39923 615 aa7.93□□□□□ -1.14
SEC13YLR208W GTT3P39996 337 aa7.93□□□□□ -1.14
SEC13YLR208W DOT5P40553 215 aa7.93□□□□□ -1.14
SEC13YLR208W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
SEC13YLR208W SSA2P10592 639 aaKnown RBP7.91□□□□□ -1.14
SEC13YLR208W YLR271WQ06152 274 aa7.91□□□□□ -1.14
SEC13YLR208W CTH1P47976 325 aa7.9□□□□□ -1.14
SEC13YLR208W ALD4P46367 519 aaKnown RBP7.89□□□□□ -1.15
SEC13YLR208W PSK1P31374 1356 aa7.88□□□□□ -1.15
SEC13YLR208W BBC1P47068 1157 aa7.88□□□□□ -1.15
SEC13YLR208W FOX2Q02207 900 aaKnown RBP7.88□□□□□ -1.15
SEC13YLR208W RAV1P47104 1357 aa7.87□□□□□ -1.15
SEC13YLR208W TAF5P38129 798 aa7.87□□□□□ -1.15
SEC13YLR208W ALD2P47771 506 aa7.87□□□□□ -1.15
SEC13YLR208W URB1P34241 1764 aaKnown RBP7.87□□□□□ -1.15
SEC13YLR208W EDE1P34216 1381 aa7.86□□□□□ -1.15
SEC13YLR208W AI2P03876 854 aa7.86□□□□□ -1.15
SEC13YLR208W EPS1P40557 701 aa7.86□□□□□ -1.15
SEC13YLR208W PRP5P21372 849 aaPredicted RBP7.85□□□□□ -1.15
SEC13YLR208W SLX5P32828 619 aaKnown RBP7.85□□□□□ -1.15
SEC13YLR208W SIS1P25294 352 aaKnown RBP7.83□□□□□ -1.16
SEC13YLR208W CPS1P27614 576 aa7.83□□□□□ -1.16
SEC13YLR208W IES2P40154 320 aa7.83□□□□□ -1.16
SEC13YLR208W MSB3P48566 633 aaPredicted RBP7.83□□□□□ -1.16
SEC13YLR208W ROM2P51862 1356 aaKnown RBP7.82□□□□□ -1.16
SEC13YLR208W BDF1P35817 686 aa7.81□□□□□ -1.16
SEC13YLR208W SSM4P40318 1319 aa7.8□□□□□ -1.16
SEC13YLR208W YJL181WP46987 611 aa7.8□□□□□ -1.16
SEC13YLR208W TY4B-HP0C2J7 1802 aa7.8□□□□□ -1.16
SEC13YLR208W TY4B-JP47024 1803 aa7.8□□□□□ -1.16
SEC13YLR208W AIM44Q99299 758 aa7.79□□□□□ -1.16
SEC13YLR208W TIF4632P39936 914 aaKnown RBP7.78□□□□□ -1.16
SEC13YLR208W RCM1P53972 490 aa7.78□□□□□ -1.16
SEC13YLR208W FKS3Q04952 1785 aa7.78□□□□□ -1.16
SEC13YLR208W RTC1Q08281 1341 aa7.77□□□□□ -1.17
SEC13YLR208W RSF2P46974 1380 aa7.76□□□□□ -1.17
SEC13YLR208W PPH3P32345 308 aa7.76□□□□□ -1.17
SEC13YLR208W IKI3Q06706 1349 aaKnown RBP7.76□□□□□ -1.17
SEC13YLR208W PRP40P33203 583 aaKnown RBP7.75□□□□□ -1.17
SEC13YLR208W ADE6P38972 1358 aaKnown RBP7.74□□□□□ -1.17
SEC13YLR208W YKR075CP36155 307 aa7.74□□□□□ -1.17
SEC13YLR208W MGA2P40578 1113 aa7.74□□□□□ -1.17
SEC13YLR208W PSD2P53037 1138 aaKnown RBP7.74□□□□□ -1.17
SEC13YLR208W COBP00163 385 aa7.73□□□□□ -1.17
SEC13YLR208W LAM6Q08001 693 aa7.73□□□□□ -1.17
SEC13YLR208W TCB1Q12466 1186 aa7.73□□□□□ -1.17
SEC13YLR208W YEF3P16521 1044 aaKnown RBP7.72□□□□□ -1.17
SEC13YLR208W TGL3P40308 642 aa7.7□□□□□ -1.18
SEC13YLR208W TAF8Q03750 510 aa7.7□□□□□ -1.18
SEC13YLR208W SNF2P22082 1703 aa7.69□□□□□ -1.18
SEC13YLR208W YKL133CP36066 463 aa7.69□□□□□ -1.18
SEC13YLR208W PAF1P38351 445 aa7.69□□□□□ -1.18
SEC13YLR208W EAF6P47128 113 aa7.69□□□□□ -1.18
SEC13YLR208W SLM3Q12093 417 aa7.69□□□□□ -1.18
SEC13YLR208W SSA4P22202 642 aaKnown RBP7.68□□□□□ -1.18
SEC13YLR208W YRF1-4O13559 1382 aa7.68□□□□□ -1.18
SEC13YLR208W YRF1-3P0CX14 1859 aa7.67□□□□□ -1.18
SEC13YLR208W YRF1-7P0CX15 1859 aa7.67□□□□□ -1.18
SEC13YLR208W YRF1-6P53819 1859 aa7.67□□□□□ -1.18
SEC13YLR208W DMA2P53924 522 aa7.66□□□□□ -1.18
SEC13YLR208W NAP1P25293 417 aaKnown RBP7.65□□□□□ -1.18
SEC13YLR208W CST9Q06032 482 aa7.64□□□□□ -1.19
SEC13YLR208W ALD3P54114 506 aa7.63□□□□□ -1.19
SEC13YLR208W SPT7P35177 1332 aa7.62□□□□□ -1.19
SEC13YLR208W RLF2Q12495 606 aa7.62□□□□□ -1.19
SEC13YLR208W XKS1P42826 600 aa7.61□□□□□ -1.19
SEC13YLR208W PUS5Q06244 254 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms