RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W TYS1P36421 394 aaKnown RBP6.37□□□□□ -1.39
CBF5YLR175W PSD2P53037 1138 aaKnown RBP6.36□□□□□ -1.39
CBF5YLR175W CST9Q06032 482 aa6.36□□□□□ -1.39
CBF5YLR175W MIF2P35201 549 aa6.35□□□□□ -1.39
CBF5YLR175W BCH2P36122 765 aa6.35□□□□□ -1.39
CBF5YLR175W MAK10Q02197 733 aa6.34□□□□□ -1.4
CBF5YLR175W BBC1P47068 1157 aa6.33□□□□□ -1.4
CBF5YLR175W NUP192P47054 1683 aa6.29□□□□□ -1.4
CBF5YLR175W BCK1Q01389 1478 aa6.28□□□□□ -1.4
CBF5YLR175W ESL2P36168 1195 aa6.28□□□□□ -1.4
CBF5YLR175W TY3B-IQ7LHG5 1498 aaKnown RBP6.27□□□□□ -1.41
CBF5YLR175W TY1B-NL2Q99337 1749 aaKnown RBP6.27□□□□□ -1.41
CBF5YLR175W LEO1P38439 464 aa6.26□□□□□ -1.41
CBF5YLR175W ALD4P46367 519 aaKnown RBP6.26□□□□□ -1.41
CBF5YLR175W SIS1P25294 352 aaKnown RBP6.25□□□□□ -1.41
CBF5YLR175W EPS1P40557 701 aa6.25□□□□□ -1.41
CBF5YLR175W CFT1Q06632 1357 aaKnown RBP6.24□□□□□ -1.41
CBF5YLR175W RAD9P14737 1309 aa6.23□□□□□ -1.41
CBF5YLR175W YMR196WQ04336 1088 aa6.22□□□□□ -1.41
CBF5YLR175W USO1P25386 1790 aa6.22□□□□□ -1.41
CBF5YLR175W TAF5P38129 798 aa6.22□□□□□ -1.41
CBF5YLR175W POL5P39985 1022 aaKnown RBP6.22□□□□□ -1.41
CBF5YLR175W KRE5P22023 1365 aa6.21□□□□□ -1.42
CBF5YLR175W SCT1P32784 759 aa6.21□□□□□ -1.42
CBF5YLR175W BDF1P35817 686 aa6.21□□□□□ -1.42
CBF5YLR175W MRX12P47084 519 aa6.21□□□□□ -1.42
CBF5YLR175W CAB1Q04430 367 aa6.21□□□□□ -1.42
CBF5YLR175W NAP1P25293 417 aaKnown RBP6.2□□□□□ -1.42
CBF5YLR175W SCY1P53009 804 aa6.18□□□□□ -1.42
CBF5YLR175W RIA1P53893 1110 aa6.18□□□□□ -1.42
CBF5YLR175W TAF8Q03750 510 aa6.18□□□□□ -1.42
CBF5YLR175W YLR419WQ06698 1435 aaKnown RBP6.18□□□□□ -1.42
CBF5YLR175W SPE2P21182 396 aa6.17□□□□□ -1.42
CBF5YLR175W MRM1P25270 412 aa6.17□□□□□ -1.42
CBF5YLR175W RAM2P29703 316 aa6.17□□□□□ -1.42
CBF5YLR175W KIP3P53086 805 aaKnown RBP6.17□□□□□ -1.42
CBF5YLR175W YNR029CP53729 429 aaKnown RBP6.16□□□□□ -1.42
CBF5YLR175W LEU3P08638 886 aa6.15□□□□□ -1.42
CBF5YLR175W YFR006WP43590 535 aa6.15□□□□□ -1.42
CBF5YLR175W UBP10P53874 792 aaPredicted RBP6.15□□□□□ -1.42
CBF5YLR175W MHP1P43638 1398 aa6.15□□□□□ -1.43
CBF5YLR175W RTG3P38165 486 aa6.14□□□□□ -1.43
CBF5YLR175W MAP2P38174 421 aaKnown RBP6.14□□□□□ -1.43
CBF5YLR175W THI12P42883 340 aa6.14□□□□□ -1.43
CBF5YLR175W THI5P43534 340 aa6.14□□□□□ -1.43
CBF5YLR175W THI11P47183 340 aa6.14□□□□□ -1.43
CBF5YLR175W THI13Q07748 340 aa6.14□□□□□ -1.43
CBF5YLR175W RCR1P38212 213 aa6.12□□□□□ -1.43
CBF5YLR175W SET1P38827 1080 aaKnown RBP6.11□□□□□ -1.43
CBF5YLR175W ORC1P54784 914 aaPredicted RBP6.11□□□□□ -1.43
CBF5YLR175W PSK1P31374 1356 aa6.11□□□□□ -1.43
CBF5YLR175W CPS1P27614 576 aa6.1□□□□□ -1.43
CBF5YLR175W CHZ1P40019 153 aaPredicted RBP6.1□□□□□ -1.43
CBF5YLR175W SEC3P33332 1336 aaKnown RBP6.09□□□□□ -1.43
CBF5YLR175W RCM1P53972 490 aa6.09□□□□□ -1.44
CBF5YLR175W PPH3P32345 308 aa6.08□□□□□ -1.44
CBF5YLR175W MAK11P20484 414 aaKnown RBP6.07□□□□□ -1.44
CBF5YLR175W FKH1P40466 484 aa6.07□□□□□ -1.44
CBF5YLR175W PDS5Q04264 1277 aa6.07□□□□□ -1.44
CBF5YLR175W MLP1Q02455 1875 aaKnown RBP6.06□□□□□ -1.44
CBF5YLR175W ADE6P38972 1358 aaKnown RBP6.06□□□□□ -1.44
CBF5YLR175W SLX5P32828 619 aaKnown RBP6.06□□□□□ -1.44
CBF5YLR175W YML133CQ03099 1374 aa6.05□□□□□ -1.44
CBF5YLR175W YLL067CQ07888 1374 aa6.05□□□□□ -1.44
CBF5YLR175W YLL066CQ99208 1374 aa6.05□□□□□ -1.44
CBF5YLR175W YPR148CQ06523 435 aa6.05□□□□□ -1.44
CBF5YLR175W LEU2P04173 364 aaPredicted RBP6.04□□□□□ -1.44
CBF5YLR175W MTR4P47047 1073 aaKnown RBP6.04□□□□□ -1.44
CBF5YLR175W VPS29P38759 282 aa6.03□□□□□ -1.44
CBF5YLR175W PRP43P53131 767 aaKnown RBP6.03□□□□□ -1.44
CBF5YLR175W VPS70P47161 811 aa6.02□□□□□ -1.44
CBF5YLR175W SPB4P25808 606 aaPredicted RBP6.01□□□□□ -1.45
CBF5YLR175W TAP42Q04372 366 aa6□□□□□ -1.45
CBF5YLR175W SPT7P35177 1332 aa6□□□□□ -1.45
CBF5YLR175W TY4B-HP0C2J7 1802 aa5.99□□□□□ -1.45
CBF5YLR175W TY4B-JP47024 1803 aa5.99□□□□□ -1.45
CBF5YLR175W RPN1P38764 993 aaKnown RBP5.99□□□□□ -1.45
CBF5YLR175W PDI1P17967 522 aaKnown RBP5.98□□□□□ -1.45
CBF5YLR175W YMR1P47147 688 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45 RIP-Chip
CBF5YLR175W IOC4Q04213 475 aa5.98□□□□□ -1.45
CBF5YLR175W COQ8P27697 501 aa5.97□□□□□ -1.45
CBF5YLR175W NOP53Q12080 455 aaKnown RBP5.97□□□□□ -1.45
CBF5YLR175W RRP5Q05022 1729 aaKnown RBP5.97□□□□□ -1.45
CBF5YLR175W GRX4P32642 244 aa5.96□□□□□ -1.45
CBF5YLR175W RTF1P53064 558 aa5.96□□□□□ -1.45
CBF5YLR175W PRP5P21372 849 aaPredicted RBP5.96□□□□□ -1.46
CBF5YLR175W CSE4P36012 229 aa5.96□□□□□ -1.46
CBF5YLR175W ENP1P38333 483 aaKnown RBP5.96□□□□□ -1.46
CBF5YLR175W RPS24AP0CX31 135 aaKnown RBP5.95□□□□□ -1.46
CBF5YLR175W RPS24BP0CX32 135 aaKnown RBP5.95□□□□□ -1.46
CBF5YLR175W YEF3P16521 1044 aaKnown RBP5.95□□□□□ -1.46
CBF5YLR175W PRP45P28004 379 aaPredicted RBP5.95□□□□□ -1.46
CBF5YLR175W NST1P53935 1240 aa5.95□□□□□ -1.46
CBF5YLR175W AUS1Q08409 1394 aa5.94□□□□□ -1.46
CBF5YLR175W YRF1-2P40105 1681 aa5.93□□□□□ -1.46
CBF5YLR175W STS1P38637 319 aa5.93□□□□□ -1.46
CBF5YLR175W DBP1P24784 617 aaKnown RBP5.92□□□□□ -1.46
CBF5YLR175W TIF4632P39936 914 aaKnown RBP5.92□□□□□ -1.46
CBF5YLR175W TRK1P12685 1235 aa5.91□□□□□ -1.46
CBF5YLR175W KAR2P16474 682 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms