RNA–Protein interactions for RNA: YLR014C

PPR1, Transcript of Zinc finger transcription factor, yeastyeast

Gene PPR1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPR1YLR014C SSP1P38871 571 aa7.29□□□□□ -1.24
PPR1YLR014C ESL2P36168 1195 aa7.29□□□□□ -1.24
PPR1YLR014C TAF5P38129 798 aa7.29□□□□□ -1.24
PPR1YLR014C CFT1Q06632 1357 aaKnown RBP7.28□□□□□ -1.24
PPR1YLR014C MDG1P53885 366 aa7.28□□□□□ -1.24
PPR1YLR014C VPS72Q03388 795 aa7.28□□□□□ -1.24
PPR1YLR014C SLX8P40072 274 aa7.27□□□□□ -1.25
PPR1YLR014C ALD4P46367 519 aaKnown RBP7.27□□□□□ -1.25
PPR1YLR014C KRE5P22023 1365 aa7.25□□□□□ -1.25
PPR1YLR014C RTS3P53289 263 aa7.24□□□□□ -1.25
PPR1YLR014C MHP1P43638 1398 aa7.24□□□□□ -1.25
PPR1YLR014C ASF1P32447 279 aa7.24□□□□□ -1.25
PPR1YLR014C HGH1P48362 394 aaKnown RBP7.23□□□□□ -1.25
PPR1YLR014C SPB4P25808 606 aaPredicted RBP7.23□□□□□ -1.25
PPR1YLR014C SWE1P32944 819 aa7.23□□□□□ -1.25
PPR1YLR014C BRN1P38170 754 aa7.23□□□□□ -1.25
PPR1YLR014C RPS0BP46654 252 aaKnown RBP7.23□□□□□ -1.25
PPR1YLR014C CAB1Q04430 367 aa7.23□□□□□ -1.25
PPR1YLR014C GIN4Q12263 1142 aa7.23□□□□□ -1.25
PPR1YLR014C MLP1Q02455 1875 aaKnown RBP7.23□□□□□ -1.25
PPR1YLR014C KIP3P53086 805 aaKnown RBP7.22□□□□□ -1.25
PPR1YLR014C MIF2P35201 549 aa7.21□□□□□ -1.26
PPR1YLR014C TAF8Q03750 510 aa7.21□□□□□ -1.26
PPR1YLR014C SPE2P21182 396 aa7.19□□□□□ -1.26
PPR1YLR014C RIA1P53893 1110 aa7.18□□□□□ -1.26
PPR1YLR014C MRX12P47084 519 aa7.17□□□□□ -1.26
PPR1YLR014C TY4B-HP0C2J7 1802 aa7.16□□□□□ -1.26
PPR1YLR014C TY4B-JP47024 1803 aa7.16□□□□□ -1.26
PPR1YLR014C YML133CQ03099 1374 aa7.15□□□□□ -1.26
PPR1YLR014C YLL067CQ07888 1374 aa7.15□□□□□ -1.26
PPR1YLR014C YLL066CQ99208 1374 aa7.15□□□□□ -1.26
PPR1YLR014C SEC3P33332 1336 aaKnown RBP7.15□□□□□ -1.26
PPR1YLR014C GEF1P37020 779 aa7.15□□□□□ -1.26
PPR1YLR014C YNR029CP53729 429 aaKnown RBP7.15□□□□□ -1.26
PPR1YLR014C YJR008WP47085 338 aa7.14□□□□□ -1.27
PPR1YLR014C PSK1P31374 1356 aa7.14□□□□□ -1.27
PPR1YLR014C SSA1P10591 642 aaKnown RBP7.14□□□□□ -1.27
PPR1YLR014C ATG36P46983 293 aa7.13□□□□□ -1.27
PPR1YLR014C SPT7P35177 1332 aa7.13□□□□□ -1.27
PPR1YLR014C LAM6Q08001 693 aa7.13□□□□□ -1.27
PPR1YLR014C YMR196WQ04336 1088 aa7.12□□□□□ -1.27
PPR1YLR014C PPH3P32345 308 aa7.11□□□□□ -1.27
PPR1YLR014C PDS5Q04264 1277 aa7.11□□□□□ -1.27
PPR1YLR014C SCT1P32784 759 aa7.1□□□□□ -1.27
PPR1YLR014C RCM1P53972 490 aa7.1□□□□□ -1.27
PPR1YLR014C CHZ1P40019 153 aaPredicted RBP7.1□□□□□ -1.27
PPR1YLR014C FKH1P40466 484 aa7.1□□□□□ -1.27
PPR1YLR014C FAR11P53917 953 aa7.1□□□□□ -1.27
PPR1YLR014C YIL177CP40434 1758 aa7.09□□□□□ -1.27
PPR1YLR014C YJL225CP40889 1758 aa7.09□□□□□ -1.27
PPR1YLR014C CPS1P27614 576 aa7.09□□□□□ -1.27
PPR1YLR014C THI12P42883 340 aa7.09□□□□□ -1.27
PPR1YLR014C THI5P43534 340 aa7.09□□□□□ -1.27
PPR1YLR014C THI11P47183 340 aa7.09□□□□□ -1.27
PPR1YLR014C THI13Q07748 340 aa7.09□□□□□ -1.27
PPR1YLR014C EBP2P36049 427 aaKnown RBP7.09□□□□□ -1.27
PPR1YLR014C OSW7P43611 510 aa7.09□□□□□ -1.27
PPR1YLR014C SLD2P34252 453 aa7.08□□□□□ -1.28
PPR1YLR014C SPC42P36094 363 aa7.08□□□□□ -1.28
PPR1YLR014C PSD2P53037 1138 aaKnown RBP7.08□□□□□ -1.28
PPR1YLR014C KIN1P13185 1064 aa7.08□□□□□ -1.28
PPR1YLR014C NST1P53935 1240 aa7.08□□□□□ -1.28
PPR1YLR014C ADE6P38972 1358 aaKnown RBP7.07□□□□□ -1.28
PPR1YLR014C TPO2P53283 614 aa7.07□□□□□ -1.28
PPR1YLR014C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
PPR1YLR014C RRP5Q05022 1729 aaKnown RBP7.07□□□□□ -1.28
PPR1YLR014C RTG3P38165 486 aa7.07□□□□□ -1.28
PPR1YLR014C YRF1-2P40105 1681 aa7.04□□□□□ -1.28
PPR1YLR014C SSF1P38789 453 aaPredicted RBP7.04□□□□□ -1.28
PPR1YLR014C NAB3P38996 802 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PPR1YLR014C HIF1Q12373 385 aa7.04□□□□□ -1.28
PPR1YLR014C SNF2P22082 1703 aa7.04□□□□□ -1.28
PPR1YLR014C NSR1P27476 414 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PPR1YLR014C ENP1P38333 483 aaKnown RBP7.04□□□□□ -1.28
PPR1YLR014C DOS2P54858 310 aa7.03□□□□□ -1.28
PPR1YLR014C PAM1P37304 830 aaKnown RBP7.02□□□□□ -1.29
PPR1YLR014C URB1P34241 1764 aaKnown RBP7.01□□□□□ -1.29
PPR1YLR014C YEF3P16521 1044 aaKnown RBP7.01□□□□□ -1.29
PPR1YLR014C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
PPR1YLR014C PRP43P53131 767 aaKnown RBP7.01□□□□□ -1.29
PPR1YLR014C FKS3Q04952 1785 aa7.01□□□□□ -1.29
PPR1YLR014C TOA1P32773 286 aa7□□□□□ -1.29
PPR1YLR014C YFR006WP43590 535 aa7□□□□□ -1.29
PPR1YLR014C AUS1Q08409 1394 aa7□□□□□ -1.29
PPR1YLR014C SUB2Q07478 446 aaKnown RBP7□□□□□ -1.29
PPR1YLR014C LEU2P04173 364 aaPredicted RBP6.99□□□□□ -1.29
PPR1YLR014C MTR4P47047 1073 aaKnown RBP6.99□□□□□ -1.29
PPR1YLR014C MAM3Q12296 706 aa6.99□□□□□ -1.29
PPR1YLR014C APC1P53886 1748 aa6.99□□□□□ -1.29
PPR1YLR014C RRN6P32786 894 aa6.98□□□□□ -1.29
PPR1YLR014C PDR1P12383 1068 aa6.98□□□□□ -1.29
PPR1YLR014C TRK1P12685 1235 aa6.98□□□□□ -1.29
PPR1YLR014C YAH1Q12184 172 aaKnown RBP6.98□□□□□ -1.29
PPR1YLR014C VPS70P47161 811 aa6.97□□□□□ -1.29
PPR1YLR014C CWC22P53333 577 aaKnown RBP6.97□□□□□ -1.29
PPR1YLR014C TAP42Q04372 366 aa6.97□□□□□ -1.29
PPR1YLR014C RPL17AP05740 184 aaKnown RBP6.96□□□□□ -1.3
PPR1YLR014C RPL17BP46990 184 aaKnown RBP6.96□□□□□ -1.3
PPR1YLR014C ZDS1P50111 915 aaKnown RBP6.95□□□□□ -1.3
PPR1YLR014C RPS24AP0CX31 135 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms