RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W TY1B-NL2Q99337 1749 aaKnown RBP9.74□□□□□ -0.85
TPO1YLL028W YDL144CQ07589 356 aa9.73□□□□□ -0.85
TPO1YLL028W KRE5P22023 1365 aa9.72□□□□□ -0.85
TPO1YLL028W VPS27P40343 622 aaKnown RBP9.72□□□□□ -0.85
TPO1YLL028W SUI2P20459 304 aaKnown RBP9.71□□□□□ -0.85
TPO1YLL028W CDC45Q08032 650 aa9.71□□□□□ -0.85
TPO1YLL028W RRP46P53256 223 aaPredicted RBP9.7□□□□□ -0.86
TPO1YLL028W URN1Q06525 465 aaKnown RBP9.7□□□□□ -0.86
TPO1YLL028W MPP10P47083 593 aaKnown RBP9.7□□□□□ -0.86
TPO1YLL028W USO1P25386 1790 aa9.7□□□□□ -0.86
TPO1YLL028W HAP1P0CE41 1502 aa9.69□□□□□ -0.86
TPO1YLL028W RPP0P05317 312 aaKnown RBP9.68□□□□□ -0.86
TPO1YLL028W PPH3P32345 308 aa9.67□□□□□ -0.86
TPO1YLL028W RCM1P53972 490 aa9.66□□□□□ -0.86
TPO1YLL028W TFA1P36100 482 aa9.63□□□□□ -0.87
TPO1YLL028W RPC31P17890 251 aa9.62□□□□□ -0.87
TPO1YLL028W SCT1P32784 759 aa9.62□□□□□ -0.87
TPO1YLL028W RIA1P53893 1110 aa9.62□□□□□ -0.87
TPO1YLL028W IOC4Q04213 475 aa9.62□□□□□ -0.87
TPO1YLL028W PSK1P31374 1356 aa9.62□□□□□ -0.87
TPO1YLL028W AUS1Q08409 1394 aa9.62□□□□□ -0.87
TPO1YLL028W YIL177CP40434 1758 aa9.61□□□□□ -0.87
TPO1YLL028W YJL225CP40889 1758 aa9.61□□□□□ -0.87
TPO1YLL028W HIM1Q06674 414 aa9.6□□□□□ -0.87
TPO1YLL028W SAP155P43612 1002 aa9.6□□□□□ -0.87
TPO1YLL028W RTR1P40084 226 aaPredicted RBP9.59□□□□□ -0.87
TPO1YLL028W MRX12P47084 519 aa9.59□□□□□ -0.87
TPO1YLL028W NAP1P25293 417 aaKnown RBP9.58□□□□□ -0.88
TPO1YLL028W TY4B-HP0C2J7 1802 aa9.58□□□□□ -0.88
TPO1YLL028W TY4B-JP47024 1803 aa9.58□□□□□ -0.88
TPO1YLL028W THI22Q06490 572 aa9.58□□□□□ -0.88
TPO1YLL028W OPY1P38271 328 aa9.55□□□□□ -0.88
TPO1YLL028W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
TPO1YLL028W KAR2P16474 682 aaKnown RBP9.55□□□□□ -0.88
TPO1YLL028W TPD3P31383 635 aa9.55□□□□□ -0.88
TPO1YLL028W HEF3P53978 1044 aaKnown RBP9.55□□□□□ -0.88
TPO1YLL028W RRP5Q05022 1729 aaKnown RBP9.55□□□□□ -0.88
TPO1YLL028W PRD1P25375 712 aa9.53□□□□□ -0.88
TPO1YLL028W IME2P32581 645 aa9.52□□□□□ -0.88
TPO1YLL028W CPS1P27614 576 aa9.52□□□□□ -0.89
TPO1YLL028W DAL5P15365 543 aa9.51□□□□□ -0.89
TPO1YLL028W CSE4P36012 229 aa9.51□□□□□ -0.89
TPO1YLL028W YRB30P53107 440 aaPredicted RBP9.51□□□□□ -0.89
TPO1YLL028W TAP42Q04372 366 aa9.51□□□□□ -0.89
TPO1YLL028W RTT109Q07794 436 aa9.51□□□□□ -0.89
TPO1YLL028W YIL092WP40497 633 aa9.5□□□□□ -0.89
TPO1YLL028W FPR3P38911 411 aaKnown RBP9.5□□□□□ -0.89
TPO1YLL028W PAP2P53632 584 aaKnown RBP9.5□□□□□ -0.89
TPO1YLL028W YNR029CP53729 429 aaKnown RBP9.5□□□□□ -0.89
TPO1YLL028W YFR016CP43597 1233 aaKnown RBP9.49□□□□□ -0.89
TPO1YLL028W MAK10Q02197 733 aa9.49□□□□□ -0.89
TPO1YLL028W APC1P53886 1748 aa9.49□□□□□ -0.89
TPO1YLL028W LEU2P04173 364 aaPredicted RBP9.48□□□□□ -0.89
TPO1YLL028W PDI1P17967 522 aaKnown RBP9.48□□□□□ -0.89
TPO1YLL028W RPS24AP0CX31 135 aaKnown RBP9.47□□□□□ -0.89
TPO1YLL028W RPS24BP0CX32 135 aaKnown RBP9.47□□□□□ -0.89
TPO1YLL028W CAB3P36076 571 aa9.46□□□□□ -0.9
TPO1YLL028W GAS4Q08271 471 aa9.46□□□□□ -0.9
TPO1YLL028W POL32P47110 350 aa9.45□□□□□ -0.9
TPO1YLL028W YRF1-2P40105 1681 aa9.45□□□□□ -0.9
TPO1YLL028W RAD2P07276 1031 aa9.45□□□□□ -0.9
TPO1YLL028W EBP2P36049 427 aaKnown RBP9.45□□□□□ -0.9
TPO1YLL028W URB1P34241 1764 aaKnown RBP9.44□□□□□ -0.9
TPO1YLL028W MTR4P47047 1073 aaKnown RBP9.44□□□□□ -0.9
TPO1YLL028W ADE6P38972 1358 aaKnown RBP9.44□□□□□ -0.9
TPO1YLL028W YRF1-4O13559 1382 aa9.43□□□□□ -0.9
TPO1YLL028W SIR4P11978 1358 aa9.42□□□□□ -0.9
TPO1YLL028W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
TPO1YLL028W RPO41P13433 1351 aaKnown RBP9.42□□□□□ -0.9
TPO1YLL028W GRX4P32642 244 aa9.42□□□□□ -0.9
TPO1YLL028W FKS3Q04952 1785 aa9.41□□□□□ -0.9
TPO1YLL028W RTF1P53064 558 aa9.41□□□□□ -0.9
TPO1YLL028W ABP1P15891 592 aaKnown RBP9.4□□□□□ -0.9
TPO1YLL028W ILV3P39522 585 aaKnown RBP9.4□□□□□ -0.9
TPO1YLL028W DPS1P04802 557 aaKnown RBP9.4□□□□□ -0.91
TPO1YLL028W YIR014WP40570 242 aa9.4□□□□□ -0.91
TPO1YLL028W PRP43P53131 767 aaKnown RBP9.4□□□□□ -0.91
TPO1YLL028W DSD1P53095 428 aa9.38□□□□□ -0.91
TPO1YLL028W PUF6Q04373 656 aaKnown RBP9.38□□□□□ -0.91
TPO1YLL028W YPR148CQ06523 435 aa9.38□□□□□ -0.91
TPO1YLL028W AKL1P38080 1108 aaKnown RBP9.37□□□□□ -0.91
TPO1YLL028W BUD27P43573 796 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
TPO1YLL028W TRP5P00931 707 aaKnown RBP9.35□□□□□ -0.91
TPO1YLL028W CLC1P17891 233 aa9.32□□□□□ -0.92
TPO1YLL028W RRT14P40470 206 aa9.32□□□□□ -0.92
TPO1YLL028W PCT1P13259 424 aa9.32□□□□□ -0.92
TPO1YLL028W YBR287WP38355 427 aa9.32□□□□□ -0.92
TPO1YLL028W MAK21Q12176 1025 aaKnown RBP9.32□□□□□ -0.92
TPO1YLL028W NTH2P35172 780 aa9.3□□□□□ -0.92
TPO1YLL028W DJP1P40564 432 aa9.3□□□□□ -0.92
TPO1YLL028W SRT1Q03175 343 aa9.29□□□□□ -0.92
TPO1YLL028W GYP7P48365 746 aa9.29□□□□□ -0.92
TPO1YLL028W EAF7P53911 425 aaKnown RBP9.29□□□□□ -0.92
TPO1YLL028W YNL050CP53952 270 aa9.29□□□□□ -0.92
TPO1YLL028W DUR1,2P32528 1835 aaKnown RBP9.28□□□□□ -0.92
TPO1YLL028W CSI1Q04368 295 aa9.27□□□□□ -0.92
TPO1YLL028W SNF7P39929 240 aaKnown RBP9.27□□□□□ -0.93
TPO1YLL028W ZDS1P50111 915 aaKnown RBP9.25□□□□□ -0.93
TPO1YLL028W YGR122WP53272 402 aa9.25□□□□□ -0.93
TPO1YLL028W HSP104P31539 908 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms