RNA–Protein interactions for RNA: YKR105C

VBA5, Transcript of Plasma membrane protein of the Major Facilitator Superfamily (MFS), yeastyeast

Gene VBA5, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA5YKR105C SPT7P35177 1332 aa8.98□□□□□ -0.97
VBA5YKR105C CHZ1P40019 153 aaPredicted RBP8.97□□□□□ -0.97
VBA5YKR105C LEU3P08638 886 aa8.97□□□□□ -0.97
VBA5YKR105C YMR196WQ04336 1088 aa8.96□□□□□ -0.98
VBA5YKR105C YNR029CP53729 429 aaKnown RBP8.95□□□□□ -0.98
VBA5YKR105C RCM1P53972 490 aa8.94□□□□□ -0.98
VBA5YKR105C PSD2P53037 1138 aaKnown RBP8.93□□□□□ -0.98
VBA5YKR105C ENP1P38333 483 aaKnown RBP8.91□□□□□ -0.98
VBA5YKR105C RTG3P38165 486 aa8.9□□□□□ -0.98
VBA5YKR105C THI12P42883 340 aa8.9□□□□□ -0.98
VBA5YKR105C THI5P43534 340 aa8.9□□□□□ -0.98
VBA5YKR105C RPS0BP46654 252 aaKnown RBP8.9□□□□□ -0.98
VBA5YKR105C THI11P47183 340 aa8.9□□□□□ -0.98
VBA5YKR105C THI13Q07748 340 aa8.9□□□□□ -0.98
VBA5YKR105C MLP1Q02455 1875 aaKnown RBP8.9□□□□□ -0.99
VBA5YKR105C PSK1P31374 1356 aa8.89□□□□□ -0.99
VBA5YKR105C YRB30P53107 440 aaPredicted RBP8.88□□□□□ -0.99
VBA5YKR105C CPS1P27614 576 aa8.87□□□□□ -0.99
VBA5YKR105C PPH3P32345 308 aa8.87□□□□□ -0.99
VBA5YKR105C FKH1P40466 484 aa8.87□□□□□ -0.99
VBA5YKR105C LEU2P04173 364 aaPredicted RBP8.83□□□□□ -1
VBA5YKR105C NSR1P27476 414 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
VBA5YKR105C NST1P53935 1240 aa8.83□□□□□ -1
VBA5YKR105C DIP2Q12220 943 aaPredicted RBP8.83□□□□□ -1
VBA5YKR105C MTR4P47047 1073 aaKnown RBP8.82□□□□□ -1
VBA5YKR105C YML133CQ03099 1374 aa8.81□□□□□ -1
VBA5YKR105C YLL067CQ07888 1374 aa8.81□□□□□ -1
VBA5YKR105C YLL066CQ99208 1374 aa8.81□□□□□ -1
VBA5YKR105C KRI1P42846 591 aaKnown RBP8.81□□□□□ -1
VBA5YKR105C YFR006WP43590 535 aa8.81□□□□□ -1
VBA5YKR105C RTF1P53064 558 aa8.8□□□□□ -1
VBA5YKR105C PDI1P17967 522 aaKnown RBP8.8□□□□□ -1
VBA5YKR105C CSE4P36012 229 aa8.8□□□□□ -1
VBA5YKR105C YPR148CQ06523 435 aa8.79□□□□□ -1
VBA5YKR105C KAR2P16474 682 aaKnown RBP8.78□□□□□ -1
VBA5YKR105C RPS24AP0CX31 135 aaKnown RBP8.76□□□□□ -1.01
VBA5YKR105C RPS24BP0CX32 135 aaKnown RBP8.76□□□□□ -1.01
VBA5YKR105C ADE6P38972 1358 aaKnown RBP8.75□□□□□ -1.01
VBA5YKR105C TRK1P12685 1235 aa8.74□□□□□ -1.01
VBA5YKR105C TAP42Q04372 366 aa8.74□□□□□ -1.01
VBA5YKR105C TY4B-HP0C2J7 1802 aa8.73□□□□□ -1.01
VBA5YKR105C TY4B-JP47024 1803 aa8.73□□□□□ -1.01
VBA5YKR105C GRX4P32642 244 aa8.73□□□□□ -1.01
VBA5YKR105C PAP2P53632 584 aaKnown RBP8.73□□□□□ -1.01
VBA5YKR105C YEF3P16521 1044 aaKnown RBP8.72□□□□□ -1.01
VBA5YKR105C GAS4Q08271 471 aa8.72□□□□□ -1.01
VBA5YKR105C DPS1P04802 557 aaKnown RBP8.71□□□□□ -1.01
VBA5YKR105C SNF2P22082 1703 aa8.71□□□□□ -1.02
VBA5YKR105C PRY3P47033 881 aa8.71□□□□□ -1.02
VBA5YKR105C PRP45P28004 379 aaPredicted RBP8.7□□□□□ -1.02
VBA5YKR105C PRP43P53131 767 aaKnown RBP8.7□□□□□ -1.02
VBA5YKR105C IOC4Q04213 475 aa8.7□□□□□ -1.02
VBA5YKR105C HIM1Q06674 414 aa8.7□□□□□ -1.02
VBA5YKR105C CWC22P53333 577 aaKnown RBP8.68□□□□□ -1.02
VBA5YKR105C PTP3P40048 928 aa8.68□□□□□ -1.02
VBA5YKR105C AUS1Q08409 1394 aa8.68□□□□□ -1.02
VBA5YKR105C PRP5P21372 849 aaPredicted RBP8.67□□□□□ -1.02
VBA5YKR105C RTR1P40084 226 aaPredicted RBP8.67□□□□□ -1.02
VBA5YKR105C RRP5Q05022 1729 aaKnown RBP8.67□□□□□ -1.02
VBA5YKR105C YDL144CQ07589 356 aa8.67□□□□□ -1.02
VBA5YKR105C PRS1P32895 427 aaKnown RBP8.66□□□□□ -1.02
VBA5YKR105C RPO41P13433 1351 aaKnown RBP8.64□□□□□ -1.03
VBA5YKR105C RPP0P05317 312 aaKnown RBP8.64□□□□□ -1.03
VBA5YKR105C YRF1-2P40105 1681 aa8.64□□□□□ -1.03
VBA5YKR105C MPP10P47083 593 aaKnown RBP8.63□□□□□ -1.03
VBA5YKR105C VPS27P40343 622 aaKnown RBP8.63□□□□□ -1.03
VBA5YKR105C CDC45Q08032 650 aa8.63□□□□□ -1.03
VBA5YKR105C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
VBA5YKR105C MSB3P48566 633 aaPredicted RBP8.62□□□□□ -1.03
VBA5YKR105C TCB1Q12466 1186 aa8.61□□□□□ -1.03
VBA5YKR105C FKS3Q04952 1785 aa8.61□□□□□ -1.03
VBA5YKR105C REB1P21538 810 aa8.6□□□□□ -1.03
VBA5YKR105C RRP46P53256 223 aaPredicted RBP8.6□□□□□ -1.03
VBA5YKR105C SLM3Q12093 417 aa8.6□□□□□ -1.03
VBA5YKR105C ENT1Q12518 454 aa8.6□□□□□ -1.03
VBA5YKR105C YIL177CP40434 1758 aa8.59□□□□□ -1.04
VBA5YKR105C YJL225CP40889 1758 aa8.59□□□□□ -1.04
VBA5YKR105C URB1P34241 1764 aaKnown RBP8.58□□□□□ -1.04
VBA5YKR105C PRD1P25375 712 aa8.57□□□□□ -1.04
VBA5YKR105C AKL1P38080 1108 aaKnown RBP8.57□□□□□ -1.04
VBA5YKR105C XKS1P42826 600 aa8.57□□□□□ -1.04
VBA5YKR105C APP1P53933 587 aa8.57□□□□□ -1.04
VBA5YKR105C RVB2Q12464 471 aaKnown RBP8.56□□□□□ -1.04
VBA5YKR105C RSF2P46974 1380 aa8.55□□□□□ -1.04
VBA5YKR105C TPD3P31383 635 aa8.55□□□□□ -1.04
VBA5YKR105C ENV9Q08651 330 aa8.55□□□□□ -1.04
VBA5YKR105C YAH1Q12184 172 aaKnown RBP8.55□□□□□ -1.04
VBA5YKR105C SUI2P20459 304 aaKnown RBP8.54□□□□□ -1.04
VBA5YKR105C HSP104P31539 908 aaKnown RBP8.54□□□□□ -1.04
VBA5YKR105C DSD1P53095 428 aa8.54□□□□□ -1.04
VBA5YKR105C APC1P53886 1748 aa8.54□□□□□ -1.04
VBA5YKR105C SAP155P43612 1002 aa8.54□□□□□ -1.04
VBA5YKR105C THI22Q06490 572 aa8.54□□□□□ -1.04
VBA5YKR105C FUN12P39730 1002 aaKnown RBP8.53□□□□□ -1.04
VBA5YKR105C MNN4P36044 1178 aa8.52□□□□□ -1.05
VBA5YKR105C IMH1Q06704 911 aaKnown RBP8.52□□□□□ -1.05
VBA5YKR105C IES2P40154 320 aa8.51□□□□□ -1.05
VBA5YKR105C AOS1Q06624 347 aa8.51□□□□□ -1.05
VBA5YKR105C RCR1P38212 213 aa8.51□□□□□ -1.05
VBA5YKR105C SIR4P11978 1358 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms