RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C OPT2Q06593 877 aa3.35□□□□□ -1.87
SET3YKR029C MDJ1P35191 511 aa3.33□□□□□ -1.88
SET3YKR029C YRR1Q12172 810 aa3.32□□□□□ -1.88
SET3YKR029C GLY1P37303 387 aaKnown RBP3.31□□□□□ -1.88
SET3YKR029C DPH6Q12429 685 aa3.31□□□□□ -1.88
SET3YKR029C GCD11P32481 527 aaKnown RBP3.3□□□□□ -1.88
SET3YKR029C TFA1P36100 482 aa3.3□□□□□ -1.88
SET3YKR029C PAT1P25644 796 aaKnown RBP3.3□□□□□ -1.88
SET3YKR029C NPL4P33755 580 aa3.3□□□□□ -1.88
SET3YKR029C NSG2P53898 299 aa3.29□□□□□ -1.88
SET3YKR029C NUD1P32336 851 aa3.28□□□□□ -1.88
SET3YKR029C NOP53Q12080 455 aaKnown RBP3.28□□□□□ -1.88
SET3YKR029C SCW11P53189 542 aa3.28□□□□□ -1.88
SET3YKR029C TY1A-DR4O74302 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-HP0C2I4 478 aaKnown RBP3.27□□□□□ -1.89
SET3YKR029C TY1A-AP0CX57 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-PR1P0CX58 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-ORP0CX59 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-PR2P0CX60 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-DR5P0CX65 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-ER2P0CX66 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-GR3P0CX67 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-LR1P0CX68 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-MR2P0CX69 440 aa3.27□□□□□ -1.89
SET3YKR029C RRN7P40992 514 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-JR2P47099 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-DR1Q03856 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-ML1Q04706 440 aaKnown RBP3.27□□□□□ -1.89
SET3YKR029C TY1A-BRQ12217 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-NL2Q12470 440 aa3.27□□□□□ -1.89
SET3YKR029C TY1A-GR2Q12485 440 aa3.27□□□□□ -1.89
SET3YKR029C SEC2P17065 759 aa3.25□□□□□ -1.89
SET3YKR029C MSB3P48566 633 aaPredicted RBP3.25□□□□□ -1.89
SET3YKR029C PEX21P50091 288 aa3.25□□□□□ -1.89
SET3YKR029C TY1A-BLQ12266 440 aa3.23□□□□□ -1.89
SET3YKR029C RAM2P29703 316 aa3.22□□□□□ -1.89
SET3YKR029C SRF1Q12516 437 aa3.22□□□□□ -1.89
SET3YKR029C IRC24P40580 263 aa3.22□□□□□ -1.89
SET3YKR029C PTK2P47116 818 aaKnown RBP3.21□□□□□ -1.9
SET3YKR029C MIP1P15801 1254 aa3.21□□□□□ -1.9
SET3YKR029C THI72Q08579 599 aa3.19□□□□□ -1.9
SET3YKR029C LYS5P50113 272 aa3.18□□□□□ -1.9
SET3YKR029C TYW1Q08960 810 aaKnown RBP3.18□□□□□ -1.9
SET3YKR029C YPR053CQ6Q5F3 151 aa3.18□□□□□ -1.9
SET3YKR029C NUP85P46673 744 aa3.17□□□□□ -1.9
SET3YKR029C PUS5Q06244 254 aa3.17□□□□□ -1.9
SET3YKR029C UGA3P26370 528 aa3.17□□□□□ -1.9
SET3YKR029C TFB4Q12004 338 aa3.16□□□□□ -1.9
SET3YKR029C YFL066CP43538 392 aa3.16□□□□□ -1.9
SET3YKR029C TUM1Q08686 304 aaKnown RBP3.15□□□□□ -1.91
SET3YKR029C AI1P03875 834 aa3.14□□□□□ -1.91
SET3YKR029C RAD54P32863 898 aa3.14□□□□□ -1.91
SET3YKR029C YLR326WQ06170 240 aaKnown RBP3.14□□□□□ -1.91
SET3YKR029C PCS60P38137 543 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SET3YKR029C JJJ3P47138 172 aa3.14□□□□□ -1.91
SET3YKR029C MOD5P07884 428 aa3.13□□□□□ -1.91
SET3YKR029C YPL034WQ03083 165 aa3.11□□□□□ -1.91
SET3YKR029C CSC1Q06538 782 aa3.1□□□□□ -1.91
SET3YKR029C UBP14P38237 781 aaKnown RBP3.1□□□□□ -1.91
SET3YKR029C SKN7P38889 622 aa3.1□□□□□ -1.91
SET3YKR029C ROG3P43602 733 aa3.1□□□□□ -1.91
SET3YKR029C UBP2Q01476 1272 aa3.09□□□□□ -1.92
SET3YKR029C MAC1P35192 417 aa3.08□□□□□ -1.92
SET3YKR029C TY1A-MR1Q04215 440 aa3.08□□□□□ -1.92
SET3YKR029C GAP1P19145 602 aaPredicted RBP3.07□□□□□ -1.92
SET3YKR029C VHR2P40041 505 aa3.07□□□□□ -1.92
SET3YKR029C CCP1P00431 361 aa3.05□□□□□ -1.92
SET3YKR029C LSC2P53312 427 aa3.04□□□□□ -1.92
SET3YKR029C PAC1P39946 494 aaKnown RBP3.03□□□□□ -1.92
SET3YKR029C YMR187CQ03236 431 aa3.03□□□□□ -1.92
SET3YKR029C GIS1Q03833 894 aa3.03□□□□□ -1.92
SET3YKR029C SYH1Q02875 849 aaKnown RBP3.02□□□□□ -1.93
SET3YKR029C GLT1Q12680 2145 aaKnown RBP3.01□□□□□ -1.93
SET3YKR029C RTT106P40161 455 aa3□□□□□ -1.93
SET3YKR029C OSH7P38755 437 aa2.99□□□□□ -1.93
SET3YKR029C TDA6Q06466 467 aa2.98□□□□□ -1.93
SET3YKR029C TCB1Q12466 1186 aa2.96□□□□□ -1.94
SET3YKR029C KIC1P38692 1080 aa2.95□□□□□ -1.94
SET3YKR029C ARG82P07250 355 aa2.95□□□□□ -1.94
SET3YKR029C KEX2P13134 814 aa2.94□□□□□ -1.94
SET3YKR029C YJR098CP47139 656 aa2.94□□□□□ -1.94
SET3YKR029C RQC2Q12532 1038 aaKnown RBP2.94□□□□□ -1.94
SET3YKR029C AMN1P38285 549 aaPredicted RBP2.94□□□□□ -1.94
SET3YKR029C ERF2Q06551 359 aa2.94□□□□□ -1.94
SET3YKR029C SBE2P42223 864 aaKnown RBP2.93□□□□□ -1.94
SET3YKR029C AAD14P42884 376 aa2.91□□□□□ -1.94
SET3YKR029C TPD3P31383 635 aa2.91□□□□□ -1.94
SET3YKR029C MRT4P33201 236 aaKnown RBP2.9□□□□□ -1.94
SET3YKR029C LSB6P42951 607 aa2.9□□□□□ -1.95
SET3YKR029C TUB4P53378 473 aa2.9□□□□□ -1.95
SET3YKR029C MCX1P38323 520 aaPredicted RBP2.89□□□□□ -1.95
SET3YKR029C IFH1P39520 1085 aa2.89□□□□□ -1.95
SET3YKR029C ADE12P80210 433 aaKnown RBP2.89□□□□□ -1.95
SET3YKR029C AGE1Q04412 482 aa2.89□□□□□ -1.95
SET3YKR029C KXD1P53158 218 aa2.89□□□□□ -1.95
SET3YKR029C YCK2P23292 546 aaKnown RBP2.88□□□□□ -1.95
SET3YKR029C DLD1P32891 587 aa2.88□□□□□ -1.95
SET3YKR029C AVT1P47082 602 aa2.88□□□□□ -1.95
SET3YKR029C YDR090CQ03193 310 aa2.87□□□□□ -1.95
SET3YKR029C YPR109WQ06104 294 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms