RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W SSM4P40318 1319 aa9.74□□□□□ -0.85
MDH1YKL085W TY3B-IQ7LHG5 1498 aaKnown RBP9.73□□□□□ -0.85
MDH1YKL085W ENT1Q12518 454 aa9.72□□□□□ -0.85
MDH1YKL085W RRP5Q05022 1729 aaKnown RBP9.72□□□□□ -0.85
MDH1YKL085W ENV9Q08651 330 aa9.7□□□□□ -0.86
MDH1YKL085W RAV1P47104 1357 aa9.67□□□□□ -0.86
MDH1YKL085W RAD9P14737 1309 aa9.67□□□□□ -0.86
MDH1YKL085W CAB1Q04430 367 aa9.66□□□□□ -0.86
MDH1YKL085W IMH1Q06704 911 aaKnown RBP9.64□□□□□ -0.87
MDH1YKL085W ALD4P46367 519 aaKnown RBP9.62□□□□□ -0.87
MDH1YKL085W TY4B-HP0C2J7 1802 aa9.61□□□□□ -0.87
MDH1YKL085W TY4B-JP47024 1803 aa9.61□□□□□ -0.87
MDH1YKL085W RTC1Q08281 1341 aa9.57□□□□□ -0.88
MDH1YKL085W URB1P34241 1764 aaKnown RBP9.55□□□□□ -0.88
MDH1YKL085W PRP45P28004 379 aaPredicted RBP9.51□□□□□ -0.89
MDH1YKL085W PAF1P38351 445 aa9.51□□□□□ -0.89
MDH1YKL085W FKS3Q04952 1785 aa9.5□□□□□ -0.89
MDH1YKL085W CPS1P27614 576 aa9.49□□□□□ -0.89
MDH1YKL085W SIS1P25294 352 aaKnown RBP9.47□□□□□ -0.89
MDH1YKL085W TAF5P38129 798 aa9.46□□□□□ -0.9
MDH1YKL085W YBL086CP38177 466 aa9.44□□□□□ -0.9
MDH1YKL085W RPN11P43588 306 aaKnown RBP9.44□□□□□ -0.9
MDH1YKL085W RCM1P53972 490 aa9.44□□□□□ -0.9
MDH1YKL085W YRF1-3P0CX14 1859 aa9.44□□□□□ -0.9
MDH1YKL085W YRF1-7P0CX15 1859 aa9.44□□□□□ -0.9
MDH1YKL085W YRF1-6P53819 1859 aa9.44□□□□□ -0.9
MDH1YKL085W PRP5P21372 849 aaPredicted RBP9.43□□□□□ -0.9
MDH1YKL085W UBP1P25037 809 aa9.43□□□□□ -0.9
MDH1YKL085W DOT5P40553 215 aa9.43□□□□□ -0.9
MDH1YKL085W PSK1P31374 1356 aa9.42□□□□□ -0.9
MDH1YKL085W PPH3P32345 308 aa9.42□□□□□ -0.9
MDH1YKL085W TAF8Q03750 510 aa9.41□□□□□ -0.9
MDH1YKL085W ADE6P38972 1358 aaKnown RBP9.4□□□□□ -0.9
MDH1YKL085W LEU3P08638 886 aa9.4□□□□□ -0.9
MDH1YKL085W MSB3P48566 633 aaPredicted RBP9.4□□□□□ -0.9
MDH1YKL085W NPR2P39923 615 aa9.38□□□□□ -0.91
MDH1YKL085W EDE1P34216 1381 aa9.37□□□□□ -0.91
MDH1YKL085W NAP1P25293 417 aaKnown RBP9.37□□□□□ -0.91
MDH1YKL085W GTT3P39996 337 aa9.37□□□□□ -0.91
MDH1YKL085W IES2P40154 320 aa9.37□□□□□ -0.91
MDH1YKL085W LYS4P49367 693 aaPredicted RBP9.37□□□□□ -0.91
MDH1YKL085W FOX2Q02207 900 aaKnown RBP9.37□□□□□ -0.91
MDH1YKL085W SSA1P10591 642 aaKnown RBP9.36□□□□□ -0.91
MDH1YKL085W YIL177CP40434 1758 aa9.36□□□□□ -0.91
MDH1YKL085W YJL225CP40889 1758 aa9.36□□□□□ -0.91
MDH1YKL085W ROM2P51862 1356 aaKnown RBP9.35□□□□□ -0.91
MDH1YKL085W UGA2P38067 497 aa9.34□□□□□ -0.91
MDH1YKL085W NOP7P53261 605 aaKnown RBP9.34□□□□□ -0.91
MDH1YKL085W RSF2P46974 1380 aa9.34□□□□□ -0.91
MDH1YKL085W ESL2P36168 1195 aa9.33□□□□□ -0.92
MDH1YKL085W CDC27P38042 758 aa9.32□□□□□ -0.92
MDH1YKL085W CTH1P47976 325 aa9.31□□□□□ -0.92
MDH1YKL085W SSA2P10592 639 aaKnown RBP9.3□□□□□ -0.92
MDH1YKL085W TCB1Q12466 1186 aa9.3□□□□□ -0.92
MDH1YKL085W ALD2P47771 506 aa9.29□□□□□ -0.92
MDH1YKL085W SLM3Q12093 417 aa9.29□□□□□ -0.92
MDH1YKL085W APC1P53886 1748 aa9.28□□□□□ -0.92
MDH1YKL085W YEF3P16521 1044 aaKnown RBP9.26□□□□□ -0.93
MDH1YKL085W YKR075CP36155 307 aa9.25□□□□□ -0.93
MDH1YKL085W YJL181WP46987 611 aa9.25□□□□□ -0.93
MDH1YKL085W PRP43P53131 767 aaKnown RBP9.25□□□□□ -0.93
MDH1YKL085W UBP10P53874 792 aaPredicted RBP9.25□□□□□ -0.93
MDH1YKL085W SNF2P22082 1703 aa9.24□□□□□ -0.93
MDH1YKL085W COBP00163 385 aa9.23□□□□□ -0.93
MDH1YKL085W PRP40P33203 583 aaKnown RBP9.22□□□□□ -0.93
MDH1YKL085W YKL133CP36066 463 aa9.22□□□□□ -0.93
MDH1YKL085W MAP2P38174 421 aaKnown RBP9.22□□□□□ -0.93
MDH1YKL085W LAM6Q08001 693 aa9.22□□□□□ -0.93
MDH1YKL085W SPE2P21182 396 aa9.2□□□□□ -0.94
MDH1YKL085W RPS24AP0CX31 135 aaKnown RBP9.19□□□□□ -0.94
MDH1YKL085W RPS24BP0CX32 135 aaKnown RBP9.19□□□□□ -0.94
MDH1YKL085W YRF1-4O13559 1382 aa9.19□□□□□ -0.94
MDH1YKL085W CSE4P36012 229 aa9.18□□□□□ -0.94
MDH1YKL085W XKS1P42826 600 aa9.18□□□□□ -0.94
MDH1YKL085W MTR4P47047 1073 aaKnown RBP9.18□□□□□ -0.94
MDH1YKL085W LEU2P04173 364 aaPredicted RBP9.17□□□□□ -0.94
MDH1YKL085W RIM15P43565 1770 aa9.17□□□□□ -0.94
MDH1YKL085W DMA1P38823 416 aa9.15□□□□□ -0.94
MDH1YKL085W UBP9P39967 754 aa9.15□□□□□ -0.94
MDH1YKL085W KIP3P53086 805 aaKnown RBP9.15□□□□□ -0.94
MDH1YKL085W YLR419WQ06698 1435 aaKnown RBP9.14□□□□□ -0.95
MDH1YKL085W YML133CQ03099 1374 aa9.13□□□□□ -0.95
MDH1YKL085W YLL067CQ07888 1374 aa9.13□□□□□ -0.95
MDH1YKL085W YLL066CQ99208 1374 aa9.13□□□□□ -0.95
MDH1YKL085W ENP1P38333 483 aaKnown RBP9.13□□□□□ -0.95
MDH1YKL085W BDF1P35817 686 aa9.11□□□□□ -0.95
MDH1YKL085W RRD1P40454 393 aaKnown RBP9.11□□□□□ -0.95
MDH1YKL085W TOM1Q03280 3268 aa9.11□□□□□ -0.95
MDH1YKL085W CHZ1P40019 153 aaPredicted RBP9.1□□□□□ -0.95
MDH1YKL085W FRK1Q03002 865 aaPredicted RBP9.09□□□□□ -0.95
MDH1YKL085W SPT7P35177 1332 aa9.08□□□□□ -0.96
MDH1YKL085W RPL17AP05740 184 aaKnown RBP9.08□□□□□ -0.96
MDH1YKL085W RPL17BP46990 184 aaKnown RBP9.08□□□□□ -0.96
MDH1YKL085W ADE16P54113 591 aaKnown RBP9.07□□□□□ -0.96
MDH1YKL085W SIR4P11978 1358 aa9.07□□□□□ -0.96
MDH1YKL085W EAF6P47128 113 aa9.06□□□□□ -0.96
MDH1YKL085W ALD3P54114 506 aa9.06□□□□□ -0.96
MDH1YKL085W RCR1P38212 213 aa9.05□□□□□ -0.96
MDH1YKL085W RPO41P13433 1351 aaKnown RBP9.04□□□□□ -0.96
MDH1YKL085W TOS1P38288 455 aa9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms