RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	HO	P09932	586 aa		5.21	□□□□□ -1.58
SOD1	YJR104C	CAT8	P39113	1433 aa		5.21	□□□□□ -1.58
SOD1	YJR104C	SSA2	P10592	639 aa	Known RBP	5.2	□□□□□ -1.58
SOD1	YJR104C	MAC1	P35192	417 aa		5.2	□□□□□ -1.58
SOD1	YJR104C	YLR271W	Q06152	274 aa		5.19	□□□□□ -1.58
SOD1	YJR104C	PUS5	Q06244	254 aa		5.19	□□□□□ -1.58
SOD1	YJR104C	TFC8	Q12308	588 aa		5.19	□□□□□ -1.58
SOD1	YJR104C	GCN2	P15442	1659 aa		5.18	□□□□□ -1.58
SOD1	YJR104C	RSM7	P47150	247 aa		5.18	□□□□□ -1.58
SOD1	YJR104C	HAA1	Q12753	694 aa	Known RBP	5.18	□□□□□ -1.58
SOD1	YJR104C	SDH2	P21801	266 aa		5.17	□□□□□ -1.58
SOD1	YJR104C	DCD1	P06773	312 aa		5.16	□□□□□ -1.58
SOD1	YJR104C	TYS1	P36421	394 aa	Known RBP	5.16	□□□□□ -1.58
SOD1	YJR104C	ALD2	P47771	506 aa		5.16	□□□□□ -1.58
SOD1	YJR104C	CTH1	P47976	325 aa		5.16	□□□□□ -1.58
SOD1	YJR104C	RPN11	P43588	306 aa	Known RBP	5.15	□□□□□ -1.59
SOD1	YJR104C	LYS4	P49367	693 aa	Predicted RBP	5.15	□□□□□ -1.59
SOD1	YJR104C	DUS1	P53759	423 aa	Known RBP	5.15	□□□□□ -1.59
SOD1	YJR104C	CDC27	P38042	758 aa		5.14	□□□□□ -1.59
SOD1	YJR104C	MGA2	P40578	1113 aa		5.14	□□□□□ -1.59
SOD1	YJR104C	PEX21	P50091	288 aa		5.14	□□□□□ -1.59
SOD1	YJR104C	EDE1	P34216	1381 aa		5.14	□□□□□ -1.59
SOD1	YJR104C	GEA1	P47102	1408 aa	Predicted RBP	5.13	□□□□□ -1.59
SOD1	YJR104C	NPR2	P39923	615 aa		5.11	□□□□□ -1.59
SOD1	YJR104C	CFT1	Q06632	1357 aa	Known RBP	5.08	□□□□□ -1.6
SOD1	YJR104C	POM152	P39685	1337 aa		5.08	□□□□□ -1.6
SOD1	YJR104C	AI2	P03876	854 aa		5.08	□□□□□ -1.6
SOD1	YJR104C	YCK3	P39962	524 aa		5.08	□□□□□ -1.6
SOD1	YJR104C	BBC1	P47068	1157 aa		5.08	□□□□□ -1.6
SOD1	YJR104C	VPS13	Q07878	3144 aa		5.07	□□□□□ -1.6
SOD1	YJR104C	NOP2	P40991	618 aa	Known RBP	5.07	□□□□□ -1.6
SOD1	YJR104C	LEU3	P08638	886 aa		5.05	□□□□□ -1.6
SOD1	YJR104C	BCH2	P36122	765 aa		5.05	□□□□□ -1.6
SOD1	YJR104C	YNR029C	P53729	429 aa	Known RBP	5.05	□□□□□ -1.6
SOD1	YJR104C	CST9	Q06032	482 aa		5.05	□□□□□ -1.6
SOD1	YJR104C	PIB1	Q06651	286 aa		5.05	□□□□□ -1.6
SOD1	YJR104C	DOT5	P40553	215 aa		5.04	□□□□□ -1.6
SOD1	YJR104C	CKB1	P43639	278 aa		5.04	□□□□□ -1.6
SOD1	YJR104C	RSF2	P46974	1380 aa		5.04	□□□□□ -1.6
SOD1	YJR104C	NUM1	Q00402	2748 aa		5.03	□□□□□ -1.6
SOD1	YJR104C	ETP1	P38748	585 aa	Known RBP	5.03	□□□□□ -1.6
SOD1	YJR104C	PSD2	P53037	1138 aa	Known RBP	5.03	□□□□□ -1.6
SOD1	YJR104C	KRE5	P22023	1365 aa		5.03	□□□□□ -1.6
SOD1	YJR104C	RRP5	Q05022	1729 aa	Known RBP	5	□□□□□ -1.61
SOD1	YJR104C	EPS1	P40557	701 aa		4.99	□□□□□ -1.61
SOD1	YJR104C	EAF6	P47128	113 aa		4.98	□□□□□ -1.61
SOD1	YJR104C	RIA1	P53893	1110 aa		4.98	□□□□□ -1.61
SOD1	YJR104C	FOX2	Q02207	900 aa	Known RBP	4.98	□□□□□ -1.61
SOD1	YJR104C	YPR117W	Q06116	2489 aa		4.98	□□□□□ -1.61
SOD1	YJR104C	SRB8	P25648	1427 aa		4.97	□□□□□ -1.61
SOD1	YJR104C	MAL31	P38156	614 aa		4.97	□□□□□ -1.61
SOD1	YJR104C	YJL181W	P46987	611 aa		4.97	□□□□□ -1.61
SOD1	YJR104C	SCY1	P53009	804 aa		4.97	□□□□□ -1.61
SOD1	YJR104C	SQS1	P53866	767 aa	Known RBP	4.95	□□□□□ -1.62
SOD1	YJR104C	YVH1	Q02256	364 aa	Known RBP	4.95	□□□□□ -1.62
SOD1	YJR104C	MRM1	P25270	412 aa		4.94	□□□□□ -1.62
SOD1	YJR104C	BDF1	P35817	686 aa		4.94	□□□□□ -1.62
SOD1	YJR104C	RAD9	P14737	1309 aa		4.94	□□□□□ -1.62
SOD1	YJR104C	ROM2	P51862	1356 aa	Known RBP	4.93	□□□□□ -1.62
SOD1	YJR104C	PRP45	P28004	379 aa	Predicted RBP	4.93	□□□□□ -1.62
SOD1	YJR104C	UBP10	P53874	792 aa	Predicted RBP	4.93	□□□□□ -1.62
SOD1	YJR104C	URB1	P34241	1764 aa	Known RBP	4.93	□□□□□ -1.62
SOD1	YJR104C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.93	□□□□□ -1.62
SOD1	YJR104C	PSK1	P31374	1356 aa		4.92	□□□□□ -1.62
SOD1	YJR104C	SNF2	P22082	1703 aa		4.92	□□□□□ -1.62
SOD1	YJR104C	YGL015C	P33199	130 aa		4.92	□□□□□ -1.62
SOD1	YJR104C	MAP2	P38174	421 aa	Known RBP	4.92	□□□□□ -1.62
SOD1	YJR104C	YLR278C	Q05854	1341 aa		4.92	□□□□□ -1.62
SOD1	YJR104C	PRP40	P33203	583 aa	Known RBP	4.91	□□□□□ -1.62
SOD1	YJR104C	MRX12	P47084	519 aa		4.91	□□□□□ -1.62
SOD1	YJR104C	CAB3	P36076	571 aa		4.9	□□□□□ -1.63
SOD1	YJR104C	SAS10	Q12136	610 aa	Predicted RBP	4.9	□□□□□ -1.63
SOD1	YJR104C	RTG3	P38165	486 aa		4.89	□□□□□ -1.63
SOD1	YJR104C	RAM2	P29703	316 aa		4.88	□□□□□ -1.63
SOD1	YJR104C	EBP2	P36049	427 aa	Known RBP	4.88	□□□□□ -1.63
SOD1	YJR104C	LAM6	Q08001	693 aa		4.88	□□□□□ -1.63
SOD1	YJR104C	YEF3	P16521	1044 aa	Known RBP	4.87	□□□□□ -1.63
SOD1	YJR104C	SLX5	P32828	619 aa	Known RBP	4.87	□□□□□ -1.63
SOD1	YJR104C	LEO1	P38439	464 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	IFH1	P39520	1085 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	IES2	P40154	320 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	ALD3	P54114	506 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	SRF1	Q12516	437 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	SPT7	P35177	1332 aa		4.87	□□□□□ -1.63
SOD1	YJR104C	TOR1	P35169	2470 aa		4.86	□□□□□ -1.63
SOD1	YJR104C	CTT1	P06115	562 aa		4.86	□□□□□ -1.63
SOD1	YJR104C	PAM1	P37304	830 aa	Known RBP	4.86	□□□□□ -1.63
SOD1	YJR104C	YER156C	P40093	338 aa	Known RBP	4.86	□□□□□ -1.63
SOD1	YJR104C	YKR075C	P36155	307 aa		4.85	□□□□□ -1.63
SOD1	YJR104C	RCR1	P38212	213 aa		4.85	□□□□□ -1.63
SOD1	YJR104C	SET1	P38827	1080 aa	Known RBP	4.85	□□□□□ -1.63
SOD1	YJR104C	FPK1	P53739	893 aa		4.85	□□□□□ -1.63
SOD1	YJR104C	KIN4	Q01919	800 aa		4.85	□□□□□ -1.63
SOD1	YJR104C	MHP1	P43638	1398 aa		4.85	□□□□□ -1.63
SOD1	YJR104C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SOD1	YJR104C	SAP155	P43612	1002 aa		4.83	□□□□□ -1.64
SOD1	YJR104C	PRP5	P21372	849 aa	Predicted RBP	4.82	□□□□□ -1.64
SOD1	YJR104C	MSN5	P52918	1224 aa		4.82	□□□□□ -1.64
SOD1	YJR104C	FKS3	Q04952	1785 aa		4.82	□□□□□ -1.64
SOD1	YJR104C	MAK11	P20484	414 aa	Known RBP	4.81	□□□□□ -1.64

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