RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W PCS60P38137 543 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
NSP1YJL041W ELP4Q02884 456 aaKnown RBP4.39□□□□□ -1.71
NSP1YJL041W ECM5Q03214 1411 aa4.39□□□□□ -1.71
NSP1YJL041W HAP5Q02516 242 aa4.38□□□□□ -1.71
NSP1YJL041W UFD4P33202 1483 aa4.38□□□□□ -1.71
NSP1YJL041W YTA7P40340 1379 aa4.38□□□□□ -1.71
NSP1YJL041W CLC1P17891 233 aa4.37□□□□□ -1.71
NSP1YJL041W CLB5P30283 435 aa4.37□□□□□ -1.71
NSP1YJL041W BRL1P38770 471 aa4.37□□□□□ -1.71
NSP1YJL041W BNI4P53858 892 aa4.37□□□□□ -1.71
NSP1YJL041W DPL1Q05567 589 aa4.37□□□□□ -1.71
NSP1YJL041W GUA1P38625 525 aaKnown RBP4.36□□□□□ -1.71
NSP1YJL041W NMA111P53920 997 aa4.36□□□□□ -1.71
NSP1YJL041W SPT23P35210 1082 aa4.36□□□□□ -1.71
NSP1YJL041W VRP1P37370 817 aa4.36□□□□□ -1.71
NSP1YJL041W CDC73Q06697 393 aa4.36□□□□□ -1.71
NSP1YJL041W PET111P08468 800 aa4.35□□□□□ -1.71
NSP1YJL041W CHZ1P40019 153 aaPredicted RBP4.35□□□□□ -1.71
NSP1YJL041W YGR130CP53278 816 aa4.35□□□□□ -1.71
NSP1YJL041W YML082WQ04533 649 aaKnown RBP4.34□□□□□ -1.71
NSP1YJL041W RAM1P22007 431 aa4.34□□□□□ -1.72
NSP1YJL041W CSN12P47130 423 aa4.34□□□□□ -1.72
NSP1YJL041W TEA1P47988 759 aa4.34□□□□□ -1.72
NSP1YJL041W MMS22Q06164 1454 aa4.33□□□□□ -1.72
NSP1YJL041W SPT7P35177 1332 aa4.33□□□□□ -1.72
NSP1YJL041W XDJ1P39102 459 aa4.33□□□□□ -1.72
NSP1YJL041W PIL1P53252 339 aaKnown RBP4.33□□□□□ -1.72
NSP1YJL041W YPR015CQ12531 247 aa4.33□□□□□ -1.72
NSP1YJL041W GAP1P19145 602 aaPredicted RBP4.33□□□□□ -1.72
NSP1YJL041W FUN12P39730 1002 aaKnown RBP4.33□□□□□ -1.72
NSP1YJL041W PEP1P32319 1579 aa4.32□□□□□ -1.72
NSP1YJL041W CSC1Q06538 782 aa4.32□□□□□ -1.72
NSP1YJL041W RPS0AP32905 252 aaKnown RBP4.31□□□□□ -1.72
NSP1YJL041W NMD2P38798 1089 aaKnown RBP4.31□□□□□ -1.72
NSP1YJL041W ORC6P38826 435 aa4.31□□□□□ -1.72
NSP1YJL041W ISU2Q12056 156 aa4.31□□□□□ -1.72
NSP1YJL041W TOP1P04786 769 aa4.31□□□□□ -1.72
NSP1YJL041W TFB3Q03290 321 aa4.31□□□□□ -1.72
NSP1YJL041W PTC2P39966 464 aaKnown RBP4.3□□□□□ -1.72
NSP1YJL041W SPC110P32380 944 aa4.3□□□□□ -1.72
NSP1YJL041W XRN1P22147 1528 aaKnown RBP4.29□□□□□ -1.72
NSP1YJL041W NAB3P38996 802 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
NSP1YJL041W TFB4Q12004 338 aa4.29□□□□□ -1.72
NSP1YJL041W SPT2P06843 333 aaPredicted RBP4.29□□□□□ -1.72
NSP1YJL041W RGR1P19263 1082 aa4.29□□□□□ -1.72
NSP1YJL041W PDR1P12383 1068 aa4.28□□□□□ -1.72
NSP1YJL041W IRC20Q06554 1556 aa4.28□□□□□ -1.72
NSP1YJL041W RNA1P11745 407 aaKnown RBP4.28□□□□□ -1.72
NSP1YJL041W IME2P32581 645 aa4.28□□□□□ -1.72
NSP1YJL041W MVP1P40959 511 aaKnown RBP4.28□□□□□ -1.72
NSP1YJL041W PEX21P50091 288 aa4.28□□□□□ -1.72
NSP1YJL041W EAF7P53911 425 aaKnown RBP4.28□□□□□ -1.72
NSP1YJL041W YMR196WQ04336 1088 aa4.28□□□□□ -1.72
NSP1YJL041W FPR4Q06205 392 aaPredicted RBP4.28□□□□□ -1.72
NSP1YJL041W VPS4P52917 437 aa4.27□□□□□ -1.73
NSP1YJL041W GLN1P32288 370 aaKnown RBP4.27□□□□□ -1.73
NSP1YJL041W TAN1P53072 289 aaPredicted RBP4.27□□□□□ -1.73
NSP1YJL041W TOP2P06786 1428 aaKnown RBP4.26□□□□□ -1.73
NSP1YJL041W CSE4P36012 229 aa4.26□□□□□ -1.73
NSP1YJL041W RKM3P38222 552 aa4.26□□□□□ -1.73
NSP1YJL041W RPL34BP40525 121 aaKnown RBP4.26□□□□□ -1.73
NSP1YJL041W SNU71P53207 620 aaKnown RBP4.26□□□□□ -1.73
NSP1YJL041W HST2P53686 357 aa4.26□□□□□ -1.73
NSP1YJL041W CWC22P53333 577 aaKnown RBP4.25□□□□□ -1.73
NSP1YJL041W BYE1P36106 594 aa4.24□□□□□ -1.73
NSP1YJL041W SUB1P54000 292 aaKnown RBP4.24□□□□□ -1.73
NSP1YJL041W YPR109WQ06104 294 aa4.24□□□□□ -1.73
NSP1YJL041W NUP170P38181 1502 aa4.24□□□□□ -1.73
NSP1YJL041W YBL036CP38197 257 aa4.24□□□□□ -1.73
NSP1YJL041W IOC4Q04213 475 aa4.24□□□□□ -1.73
NSP1YJL041W MMP1Q12372 583 aa4.24□□□□□ -1.73
NSP1YJL041W PAF1P38351 445 aa4.23□□□□□ -1.73
NSP1YJL041W SNF7P39929 240 aaKnown RBP4.23□□□□□ -1.73
NSP1YJL041W POL5P39985 1022 aaKnown RBP4.23□□□□□ -1.73
NSP1YJL041W YIR014WP40570 242 aa4.23□□□□□ -1.73
NSP1YJL041W SMC3P47037 1230 aa4.23□□□□□ -1.73
NSP1YJL041W ENV11P53246 860 aa4.23□□□□□ -1.73
NSP1YJL041W SRP54P20424 541 aaKnown RBP4.23□□□□□ -1.73
NSP1YJL041W SDH2P21801 266 aa4.23□□□□□ -1.73
NSP1YJL041W YJL007CP47080 104 aa4.23□□□□□ -1.73
NSP1YJL041W HSC82P15108 705 aaKnown RBP4.22□□□□□ -1.73
NSP1YJL041W CBF5P33322 483 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
NSP1YJL041W FPK1P53739 893 aa4.22□□□□□ -1.73
NSP1YJL041W YLR419WQ06698 1435 aaKnown RBP4.22□□□□□ -1.73
NSP1YJL041W DPS1P04802 557 aaKnown RBP4.22□□□□□ -1.73
NSP1YJL041W PKC1P24583 1151 aa4.22□□□□□ -1.73
NSP1YJL041W BIM1P40013 344 aa4.22□□□□□ -1.73
NSP1YJL041W MSH4P40965 878 aaPredicted RBP4.22□□□□□ -1.73
NSP1YJL041W STR2P47164 639 aa4.22□□□□□ -1.73
NSP1YJL041W YNL011CP53980 444 aa4.22□□□□□ -1.73
NSP1YJL041W YRR1Q12172 810 aa4.22□□□□□ -1.73
NSP1YJL041W EDE1P34216 1381 aa4.22□□□□□ -1.73
NSP1YJL041W SIT4P20604 311 aa4.21□□□□□ -1.73
NSP1YJL041W PRS1P32895 427 aaKnown RBP4.21□□□□□ -1.73
NSP1YJL041W NIS1P53939 407 aa4.21□□□□□ -1.73
NSP1YJL041W NOP58Q12499 511 aaKnown RBP4.21□□□□□ -1.73
NSP1YJL041W IKI3Q06706 1349 aaKnown RBP4.21□□□□□ -1.73
NSP1YJL041W SSA4P22202 642 aaKnown RBP4.21□□□□□ -1.74
NSP1YJL041W SPT5P27692 1063 aaKnown RBP4.21□□□□□ -1.74
NSP1YJL041W RTF1P53064 558 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms