RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C MPC54Q08550 464 aa8.76□□□□□ -1.01
YIR043CYIR043C TTI1P36097 1038 aa8.75□□□□□ -1.01
YIR043CYIR043C SPP1Q03012 353 aa8.74□□□□□ -1.01
YIR043CYIR043C PEX29Q03370 554 aa8.73□□□□□ -1.01
YIR043CYIR043C SUP45P12385 437 aaKnown RBP8.72□□□□□ -1.01
YIR043CYIR043C YNL115CP53925 644 aa8.72□□□□□ -1.01
YIR043CYIR043C YNL035CP53962 389 aaKnown RBP8.72□□□□□ -1.01
YIR043CYIR043C LAM6Q08001 693 aa8.72□□□□□ -1.01
YIR043CYIR043C ISU2Q12056 156 aa8.72□□□□□ -1.01
YIR043CYIR043C RSC30P38781 883 aa8.71□□□□□ -1.02
YIR043CYIR043C IOC2Q12072 812 aa8.71□□□□□ -1.02
YIR043CYIR043C YDJ1P25491 409 aaKnown RBP8.7□□□□□ -1.02
YIR043CYIR043C SPT5P27692 1063 aaKnown RBP8.7□□□□□ -1.02
YIR043CYIR043C ENO2P00925 437 aaKnown RBP8.69□□□□□ -1.02
YIR043CYIR043C RTF1P53064 558 aa8.69□□□□□ -1.02
YIR043CYIR043C RPL34AP87262 121 aaPredicted RBP8.69□□□□□ -1.02
YIR043CYIR043C MAK16P10962 306 aaPredicted RBP8.68□□□□□ -1.02
YIR043CYIR043C NMA111P53920 997 aa8.68□□□□□ -1.02
YIR043CYIR043C ENO1P00924 437 aaKnown RBP8.67□□□□□ -1.02
YIR043CYIR043C KEX2P13134 814 aa8.67□□□□□ -1.02
YIR043CYIR043C TRM1P15565 570 aaKnown RBP8.66□□□□□ -1.02
YIR043CYIR043C RTG1P32607 177 aa8.66□□□□□ -1.02
YIR043CYIR043C NOP8Q08287 484 aaPredicted RBP8.66□□□□□ -1.02
YIR043CYIR043C NOB1Q08444 459 aaKnown RBP8.66□□□□□ -1.02
YIR043CYIR043C NUD1P32336 851 aa8.65□□□□□ -1.02
YIR043CYIR043C UBP9P39967 754 aa8.64□□□□□ -1.03
YIR043CYIR043C PUS6P53294 404 aa8.64□□□□□ -1.03
YIR043CYIR043C ERF2Q06551 359 aa8.64□□□□□ -1.03
YIR043CYIR043C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
YIR043CYIR043C LDB19Q12502 818 aa8.63□□□□□ -1.03
YIR043CYIR043C SEC61P32915 480 aa8.62□□□□□ -1.03
YIR043CYIR043C NPL4P33755 580 aa8.62□□□□□ -1.03
YIR043CYIR043C TBF1Q02457 562 aa8.62□□□□□ -1.03
YIR043CYIR043C MRX10Q05648 414 aa8.62□□□□□ -1.03
YIR043CYIR043C SIS2P36024 562 aa8.61□□□□□ -1.03
YIR043CYIR043C RIM21P48565 533 aa8.61□□□□□ -1.03
YIR043CYIR043C PUP1P25043 261 aa8.6□□□□□ -1.03
YIR043CYIR043C TFG1P41895 735 aaPredicted RBP8.6□□□□□ -1.03
YIR043CYIR043C YML083CQ04526 418 aa8.6□□□□□ -1.03
YIR043CYIR043C PDR1P12383 1068 aa8.59□□□□□ -1.03
YIR043CYIR043C YPP1P46951 817 aa8.59□□□□□ -1.03
YIR043CYIR043C CDC3P32457 520 aaKnown RBP8.57□□□□□ -1.04
YIR043CYIR043C NAF1P53919 492 aaKnown RBP8.57□□□□□ -1.04
YIR043CYIR043C TGL4P36165 910 aa8.56□□□□□ -1.04
YIR043CYIR043C YDL129WQ07555 291 aa8.56□□□□□ -1.04
YIR043CYIR043C ISM1P48526 1002 aa8.55□□□□□ -1.04
YIR043CYIR043C NCR1Q12200 1170 aa8.55□□□□□ -1.04
YIR043CYIR043C GCD11P32481 527 aaKnown RBP8.54□□□□□ -1.04
YIR043CYIR043C STR2P47164 639 aa8.54□□□□□ -1.04
YIR043CYIR043C HAP5Q02516 242 aa8.54□□□□□ -1.04
YIR043CYIR043C MCM16Q12262 181 aa8.54□□□□□ -1.04
YIR043CYIR043C KTR7P40504 517 aa8.53□□□□□ -1.04
YIR043CYIR043C YDL206WQ12424 762 aa8.53□□□□□ -1.04
YIR043CYIR043C ISF1P32488 338 aa8.52□□□□□ -1.05
YIR043CYIR043C SLD2P34252 453 aa8.52□□□□□ -1.05
YIR043CYIR043C TUB4P53378 473 aa8.51□□□□□ -1.05
YIR043CYIR043C RDS2P19541 446 aaKnown RBP8.5□□□□□ -1.05
YIR043CYIR043C PEP12P32854 288 aa8.5□□□□□ -1.05
YIR043CYIR043C ECM23Q02710 187 aa8.5□□□□□ -1.05
YIR043CYIR043C ENV9Q08651 330 aa8.5□□□□□ -1.05
YIR043CYIR043C RAM1P22007 431 aa8.49□□□□□ -1.05
YIR043CYIR043C EMP47P43555 445 aa8.49□□□□□ -1.05
YIR043CYIR043C AGE1Q04412 482 aa8.48□□□□□ -1.05
YIR043CYIR043C HAT1Q12341 374 aa8.48□□□□□ -1.05
YIR043CYIR043C TY1A-DR4O74302 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-HP0C2I4 478 aaKnown RBP8.47□□□□□ -1.05
YIR043CYIR043C TY1A-AP0CX57 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-PR1P0CX58 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-ORP0CX59 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-PR2P0CX60 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-DR5P0CX65 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-ER2P0CX66 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-GR3P0CX67 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-LR1P0CX68 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-MR2P0CX69 440 aa8.47□□□□□ -1.05
YIR043CYIR043C SAP30P38429 201 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-JR2P47099 440 aa8.47□□□□□ -1.05
YIR043CYIR043C ARH1P48360 493 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-DR1Q03856 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-ML1Q04706 440 aaKnown RBP8.47□□□□□ -1.05
YIR043CYIR043C TY1A-BRQ12217 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-NL2Q12470 440 aa8.47□□□□□ -1.05
YIR043CYIR043C TY1A-GR2Q12485 440 aa8.47□□□□□ -1.05
YIR043CYIR043C SEC2P17065 759 aa8.46□□□□□ -1.06
YIR043CYIR043C RPA14P50106 137 aa8.46□□□□□ -1.06
YIR043CYIR043C TEC1P18412 486 aa8.45□□□□□ -1.06
YIR043CYIR043C SSF1P38789 453 aaPredicted RBP8.45□□□□□ -1.06
YIR043CYIR043C STE20Q03497 939 aaKnown RBP8.44□□□□□ -1.06
YIR043CYIR043C YDR344CQ05510 147 aa8.44□□□□□ -1.06
YIR043CYIR043C BUD20Q08004 166 aaPredicted RBP8.44□□□□□ -1.06
YIR043CYIR043C GUT2P32191 649 aa8.43□□□□□ -1.06
YIR043CYIR043C UBX7P38349 436 aa8.43□□□□□ -1.06
YIR043CYIR043C ELP4Q02884 456 aaKnown RBP8.43□□□□□ -1.06
YIR043CYIR043C YPR097WQ06839 1073 aa8.43□□□□□ -1.06
YIR043CYIR043C ALR1Q08269 859 aa8.43□□□□□ -1.06
YIR043CYIR043C GAL2P13181 574 aa8.42□□□□□ -1.06
YIR043CYIR043C FIG4P42837 879 aa8.42□□□□□ -1.06
YIR043CYIR043C BNI4P53858 892 aa8.42□□□□□ -1.06
YIR043CYIR043C MRX12P47084 519 aa8.41□□□□□ -1.06
YIR043CYIR043C PAC1P39946 494 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms