RNA–Protein interactions for RNA: YIL022W

TIM44, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM44, Length 1,296 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM44YIL022W RPN11P43588 306 aaKnown RBP12.44□□□□□ -0.42
TIM44YIL022W TAF5P38129 798 aa12.43□□□□□ -0.42
TIM44YIL022W EDE1P34216 1381 aa12.43□□□□□ -0.42
TIM44YIL022W RAD9P14737 1309 aa12.41□□□□□ -0.42
TIM44YIL022W ALD4P46367 519 aaKnown RBP12.41□□□□□ -0.42
TIM44YIL022W ALD2P47771 506 aa12.39□□□□□ -0.43
TIM44YIL022W IKI3Q06706 1349 aaKnown RBP12.37□□□□□ -0.43
TIM44YIL022W RAV1P47104 1357 aa12.36□□□□□ -0.43
TIM44YIL022W PAF1P38351 445 aa12.36□□□□□ -0.43
TIM44YIL022W YJL181WP46987 611 aa12.36□□□□□ -0.43
TIM44YIL022W PRY3P47033 881 aa12.36□□□□□ -0.43
TIM44YIL022W SSA2P10592 639 aaKnown RBP12.34□□□□□ -0.43
TIM44YIL022W PRP5P21372 849 aaPredicted RBP12.33□□□□□ -0.44
TIM44YIL022W NAP1P25293 417 aaKnown RBP12.32□□□□□ -0.44
TIM44YIL022W DOT5P40553 215 aa12.32□□□□□ -0.44
TIM44YIL022W LYS4P49367 693 aaPredicted RBP12.31□□□□□ -0.44
TIM44YIL022W PSK1P31374 1356 aa12.3□□□□□ -0.44
TIM44YIL022W CPS1P27614 576 aa12.28□□□□□ -0.44
TIM44YIL022W IES2P40154 320 aa12.28□□□□□ -0.44
TIM44YIL022W ROM2P51862 1356 aaKnown RBP12.28□□□□□ -0.44
TIM44YIL022W NPR2P39923 615 aa12.27□□□□□ -0.45
TIM44YIL022W URB1P34241 1764 aaKnown RBP12.27□□□□□ -0.45
TIM44YIL022W PRP40P33203 583 aaKnown RBP12.25□□□□□ -0.45
TIM44YIL022W LAM6Q08001 693 aa12.25□□□□□ -0.45
TIM44YIL022W FOX2Q02207 900 aaKnown RBP12.24□□□□□ -0.45
TIM44YIL022W RTC1Q08281 1341 aa12.24□□□□□ -0.45
TIM44YIL022W MSB3P48566 633 aaPredicted RBP12.22□□□□□ -0.45
TIM44YIL022W BFR2Q06631 534 aaKnown RBP12.22□□□□□ -0.45
TIM44YIL022W SSM4P40318 1319 aa12.21□□□□□ -0.45
TIM44YIL022W YEF3P16521 1044 aaKnown RBP12.21□□□□□ -0.45
TIM44YIL022W RCM1P53972 490 aa12.2□□□□□ -0.46
TIM44YIL022W TCB1Q12466 1186 aa12.19□□□□□ -0.46
TIM44YIL022W TY4B-HP0C2J7 1802 aa12.18□□□□□ -0.46
TIM44YIL022W TY4B-JP47024 1803 aa12.18□□□□□ -0.46
TIM44YIL022W CTH1P47976 325 aa12.18□□□□□ -0.46
TIM44YIL022W RSF2P46974 1380 aa12.17□□□□□ -0.46
TIM44YIL022W FKS3Q04952 1785 aa12.13□□□□□ -0.47
TIM44YIL022W TAF8Q03750 510 aa12.12□□□□□ -0.47
TIM44YIL022W ENP1P38333 483 aaKnown RBP12.1□□□□□ -0.47
TIM44YIL022W ADE6P38972 1358 aaKnown RBP12.09□□□□□ -0.47
TIM44YIL022W PPH3P32345 308 aa12.08□□□□□ -0.48
TIM44YIL022W YKL133CP36066 463 aa12.08□□□□□ -0.48
TIM44YIL022W COBP00163 385 aa12.07□□□□□ -0.48
TIM44YIL022W SPT7P35177 1332 aa12.07□□□□□ -0.48
TIM44YIL022W RPG1P38249 964 aaKnown RBP12.06□□□□□ -0.48
TIM44YIL022W NOP7P53261 605 aaKnown RBP12.06□□□□□ -0.48
TIM44YIL022W SLM3Q12093 417 aa12.06□□□□□ -0.48
TIM44YIL022W ALD3P54114 506 aa12.04□□□□□ -0.48
TIM44YIL022W BDF1P35817 686 aa12.03□□□□□ -0.48
TIM44YIL022W YKR075CP36155 307 aa12.03□□□□□ -0.48
TIM44YIL022W ESL2P36168 1195 aa12.02□□□□□ -0.49
TIM44YIL022W YRF1-4O13559 1382 aa12.01□□□□□ -0.49
TIM44YIL022W AAD16Q02895 342 aa11.98□□□□□ -0.49
TIM44YIL022W YRF1-3P0CX14 1859 aa11.97□□□□□ -0.49
TIM44YIL022W YRF1-7P0CX15 1859 aa11.97□□□□□ -0.49
TIM44YIL022W YRF1-6P53819 1859 aa11.97□□□□□ -0.49
TIM44YIL022W XKS1P42826 600 aa11.96□□□□□ -0.49
TIM44YIL022W CSE4P36012 229 aa11.94□□□□□ -0.5
TIM44YIL022W SAP155P43612 1002 aa11.93□□□□□ -0.5
TIM44YIL022W EAF6P47128 113 aa11.93□□□□□ -0.5
TIM44YIL022W SNF2P22082 1703 aa11.91□□□□□ -0.5
TIM44YIL022W NSR1P27476 414 aaKnown RBP RIP-Chip data11.9□□□□□ -0.5not detected
TIM44YIL022W SSA4P22202 642 aaKnown RBP11.89□□□□□ -0.51
TIM44YIL022W MTR4P47047 1073 aaKnown RBP11.89□□□□□ -0.51
TIM44YIL022W PEX21P50091 288 aa11.89□□□□□ -0.51
TIM44YIL022W RPS24AP0CX31 135 aaKnown RBP11.88□□□□□ -0.51
TIM44YIL022W RPS24BP0CX32 135 aaKnown RBP11.88□□□□□ -0.51
TIM44YIL022W PRP43P53131 767 aaKnown RBP11.88□□□□□ -0.51
TIM44YIL022W MSB4Q12317 492 aa11.88□□□□□ -0.51
TIM44YIL022W LEU2P04173 364 aaPredicted RBP11.87□□□□□ -0.51
TIM44YIL022W CHZ1P40019 153 aaPredicted RBP11.87□□□□□ -0.51
TIM44YIL022W MEC3Q02574 474 aa11.87□□□□□ -0.51
TIM44YIL022W BUG1Q12191 341 aa11.87□□□□□ -0.51
TIM44YIL022W MSN5P52918 1224 aa11.86□□□□□ -0.51
TIM44YIL022W POL5P39985 1022 aaKnown RBP11.85□□□□□ -0.51
TIM44YIL022W FRK1Q03002 865 aaPredicted RBP11.85□□□□□ -0.51
TIM44YIL022W APC1P53886 1748 aa11.84□□□□□ -0.51
TIM44YIL022W SQS1P53866 767 aaKnown RBP11.84□□□□□ -0.51
TIM44YIL022W YER156CP40093 338 aaKnown RBP11.83□□□□□ -0.52
TIM44YIL022W CTT1P06115 562 aa11.82□□□□□ -0.52
TIM44YIL022W PUS5Q06244 254 aa11.82□□□□□ -0.52
TIM44YIL022W NOP2P40991 618 aaKnown RBP11.81□□□□□ -0.52
TIM44YIL022W HPC2Q01448 625 aa11.81□□□□□ -0.52
TIM44YIL022W SPE2P21182 396 aa11.8□□□□□ -0.52
TIM44YIL022W TOS1P38288 455 aa11.79□□□□□ -0.52
TIM44YIL022W UTP22P53254 1237 aaPredicted RBP11.79□□□□□ -0.52
TIM44YIL022W YLR419WQ06698 1435 aaKnown RBP11.78□□□□□ -0.52
TIM44YIL022W RRT14P40470 206 aa11.77□□□□□ -0.53
TIM44YIL022W MHP1P43638 1398 aa11.76□□□□□ -0.53
TIM44YIL022W RAD4P14736 754 aa11.75□□□□□ -0.53
TIM44YIL022W YKL222CP35995 705 aa11.75□□□□□ -0.53
TIM44YIL022W ADE16P54113 591 aaKnown RBP11.74□□□□□ -0.53
TIM44YIL022W ATG13Q06628 738 aa11.74□□□□□ -0.53
TIM44YIL022W GRE2Q12068 342 aaKnown RBP11.74□□□□□ -0.53
TIM44YIL022W SEC3P33332 1336 aaKnown RBP11.74□□□□□ -0.53
TIM44YIL022W SIR4P11978 1358 aa11.73□□□□□ -0.53
TIM44YIL022W YIL177CP40434 1758 aa11.72□□□□□ -0.53
TIM44YIL022W YJL225CP40889 1758 aa11.72□□□□□ -0.53
TIM44YIL022W KIP3P53086 805 aaKnown RBP11.72□□□□□ -0.53
TIM44YIL022W RCR1P38212 213 aa11.7□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms