RNA–Protein interactions for RNA: YHR139C

SPS100, Transcript of Protein required for spore wall maturation, yeast

Gene SPS100, Length 981 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPS100	YHR139C	PSK1	P31374	1356 aa		11.73	□□□□□ -0.53
SPS100	YHR139C	PTP3	P40048	928 aa		11.73	□□□□□ -0.53
SPS100	YHR139C	MHP1	P43638	1398 aa		11.68	□□□□□ -0.54
SPS100	YHR139C	MLP1	Q02455	1875 aa	Known RBP	11.66	□□□□□ -0.54
SPS100	YHR139C	TY4B-H	P0C2J7	1802 aa		11.65	□□□□□ -0.55
SPS100	YHR139C	TY4B-J	P47024	1803 aa		11.65	□□□□□ -0.55
SPS100	YHR139C	LEU2	P04173	364 aa	Predicted RBP	11.63	□□□□□ -0.55
SPS100	YHR139C	YAH1	Q12184	172 aa	Known RBP	11.63	□□□□□ -0.55
SPS100	YHR139C	ADE6	P38972	1358 aa	Known RBP	11.63	□□□□□ -0.55
SPS100	YHR139C	FKH1	P40466	484 aa		11.62	□□□□□ -0.55
SPS100	YHR139C	PDS5	Q04264	1277 aa		11.62	□□□□□ -0.55
SPS100	YHR139C	YML133C	Q03099	1374 aa		11.62	□□□□□ -0.55
SPS100	YHR139C	YLL067C	Q07888	1374 aa		11.62	□□□□□ -0.55
SPS100	YHR139C	YLL066C	Q99208	1374 aa		11.62	□□□□□ -0.55
SPS100	YHR139C	MTR4	P47047	1073 aa	Known RBP	11.61	□□□□□ -0.55
SPS100	YHR139C	RRP5	Q05022	1729 aa	Known RBP	11.6	□□□□□ -0.55
SPS100	YHR139C	RTG3	P38165	486 aa		11.6	□□□□□ -0.55
SPS100	YHR139C	APP1	P53933	587 aa		11.59	□□□□□ -0.55
SPS100	YHR139C	PRP45	P28004	379 aa	Predicted RBP	11.58	□□□□□ -0.56
SPS100	YHR139C	REB1	P21538	810 aa		11.57	□□□□□ -0.56
SPS100	YHR139C	CSE4	P36012	229 aa		11.57	□□□□□ -0.56
SPS100	YHR139C	PRP43	P53131	767 aa	Known RBP	11.56	□□□□□ -0.56
SPS100	YHR139C	ENT1	Q12518	454 aa		11.56	□□□□□ -0.56
SPS100	YHR139C	RPS24A	P0CX31	135 aa	Known RBP	11.55	□□□□□ -0.56
SPS100	YHR139C	RPS24B	P0CX32	135 aa	Known RBP	11.55	□□□□□ -0.56
SPS100	YHR139C	PRP5	P21372	849 aa	Predicted RBP	11.55	□□□□□ -0.56
SPS100	YHR139C	ENV9	Q08651	330 aa		11.51	□□□□□ -0.57
SPS100	YHR139C	PDI1	P17967	522 aa	Known RBP	11.49	□□□□□ -0.57
SPS100	YHR139C	YRF1-2	P40105	1681 aa		11.49	□□□□□ -0.57
SPS100	YHR139C	MSB3	P48566	633 aa	Predicted RBP	11.48	□□□□□ -0.57
SPS100	YHR139C	RTF1	P53064	558 aa		11.48	□□□□□ -0.57
SPS100	YHR139C	SEC3	P33332	1336 aa	Known RBP	11.47	□□□□□ -0.57
SPS100	YHR139C	PSD2	P53037	1138 aa	Known RBP	11.47	□□□□□ -0.57
SPS100	YHR139C	YIL055C	P40523	627 aa	Known RBP	11.45	□□□□□ -0.58
SPS100	YHR139C	TAP42	Q04372	366 aa		11.45	□□□□□ -0.58
SPS100	YHR139C	GAS4	Q08271	471 aa		11.45	□□□□□ -0.58
SPS100	YHR139C	SLM3	Q12093	417 aa		11.45	□□□□□ -0.58
SPS100	YHR139C	YIL177C	P40434	1758 aa		11.45	□□□□□ -0.58
SPS100	YHR139C	YJL225C	P40889	1758 aa		11.45	□□□□□ -0.58
SPS100	YHR139C	NST1	P53935	1240 aa		11.44	□□□□□ -0.58
SPS100	YHR139C	IMH1	Q06704	911 aa	Known RBP	11.44	□□□□□ -0.58
SPS100	YHR139C	DPS1	P04802	557 aa	Known RBP	11.43	□□□□□ -0.58
SPS100	YHR139C	TCB1	Q12466	1186 aa		11.43	□□□□□ -0.58
SPS100	YHR139C	SPT7	P35177	1332 aa		11.42	□□□□□ -0.58
SPS100	YHR139C	GRX4	P32642	244 aa		11.42	□□□□□ -0.58
SPS100	YHR139C	AUS1	Q08409	1394 aa		11.41	□□□□□ -0.58
SPS100	YHR139C	HIM1	Q06674	414 aa		11.41	□□□□□ -0.58
SPS100	YHR139C	LEU3	P08638	886 aa		11.4	□□□□□ -0.58
SPS100	YHR139C	YEF3	P16521	1044 aa	Known RBP	11.4	□□□□□ -0.58
SPS100	YHR139C	FKS3	Q04952	1785 aa		11.39	□□□□□ -0.59
SPS100	YHR139C	KAR2	P16474	682 aa	Known RBP	11.39	□□□□□ -0.59
SPS100	YHR139C	URB1	P34241	1764 aa	Known RBP	11.39	□□□□□ -0.59
SPS100	YHR139C	TRK1	P12685	1235 aa		11.37	□□□□□ -0.59
SPS100	YHR139C	RSF2	P46974	1380 aa		11.37	□□□□□ -0.59
SPS100	YHR139C	IES2	P40154	320 aa		11.36	□□□□□ -0.59
SPS100	YHR139C	XKS1	P42826	600 aa		11.35	□□□□□ -0.59
SPS100	YHR139C	APC1	P53886	1748 aa		11.35	□□□□□ -0.59
SPS100	YHR139C	ENP1	P38333	483 aa	Known RBP	11.34	□□□□□ -0.59
SPS100	YHR139C	YRF1-3	P0CX14	1859 aa		11.34	□□□□□ -0.59
SPS100	YHR139C	YRF1-7	P0CX15	1859 aa		11.34	□□□□□ -0.59
SPS100	YHR139C	YRF1-6	P53819	1859 aa		11.34	□□□□□ -0.59
SPS100	YHR139C	GLN1	P32288	370 aa	Known RBP	11.33	□□□□□ -0.6
SPS100	YHR139C	PAP2	P53632	584 aa	Known RBP	11.32	□□□□□ -0.6
SPS100	YHR139C	RPO41	P13433	1351 aa	Known RBP	11.3	□□□□□ -0.6
SPS100	YHR139C	YMR074C	Q04773	145 aa		11.29	□□□□□ -0.6
SPS100	YHR139C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.28	□□□□□ -0.6	not detected
SPS100	YHR139C	ROM2	P51862	1356 aa	Known RBP	11.28	□□□□□ -0.6
SPS100	YHR139C	RCR1	P38212	213 aa		11.27	□□□□□ -0.61
SPS100	YHR139C	YKL133C	P36066	463 aa		11.26	□□□□□ -0.61
SPS100	YHR139C	DOT5	P40553	215 aa		11.26	□□□□□ -0.61
SPS100	YHR139C	SIR4	P11978	1358 aa		11.26	□□□□□ -0.61
SPS100	YHR139C	IOC4	Q04213	475 aa		11.24	□□□□□ -0.61
SPS100	YHR139C	RRP46	P53256	223 aa	Predicted RBP	11.23	□□□□□ -0.61
SPS100	YHR139C	MEC3	Q02574	474 aa		11.23	□□□□□ -0.61
SPS100	YHR139C	SNF2	P22082	1703 aa		11.23	□□□□□ -0.61
SPS100	YHR139C	AKL1	P38080	1108 aa	Known RBP	11.22	□□□□□ -0.61
SPS100	YHR139C	DSD1	P53095	428 aa		11.22	□□□□□ -0.61
SPS100	YHR139C	FOX2	Q02207	900 aa	Known RBP	11.22	□□□□□ -0.61
SPS100	YHR139C	RTR1	P40084	226 aa	Predicted RBP	11.2	□□□□□ -0.62
SPS100	YHR139C	COB	P00163	385 aa		11.19	□□□□□ -0.62
SPS100	YHR139C	HSP104	P31539	908 aa	Known RBP	11.19	□□□□□ -0.62
SPS100	YHR139C	RPN11	P43588	306 aa	Known RBP	11.19	□□□□□ -0.62
SPS100	YHR139C	ADE16	P54113	591 aa	Known RBP	11.19	□□□□□ -0.62
SPS100	YHR139C	YRF1-4	O13559	1382 aa		11.18	□□□□□ -0.62
SPS100	YHR139C	FRK1	Q03002	865 aa	Predicted RBP	11.18	□□□□□ -0.62
SPS100	YHR139C	CTF4	Q01454	927 aa		11.17	□□□□□ -0.62
SPS100	YHR139C	BUD31	P25337	157 aa	Predicted RBP	11.16	□□□□□ -0.62
SPS100	YHR139C	LAM6	Q08001	693 aa		11.16	□□□□□ -0.62
SPS100	YHR139C	INP54	Q08227	384 aa	Known RBP	11.16	□□□□□ -0.62
SPS100	YHR139C	YJL181W	P46987	611 aa		11.15	□□□□□ -0.62
SPS100	YHR139C	UBP1	P25037	809 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	PRD1	P25375	712 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	YKR075C	P36155	307 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	AOS1	Q06624	347 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	ATG13	Q06628	738 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	YDL144C	Q07589	356 aa		11.14	□□□□□ -0.63
SPS100	YHR139C	PRP40	P33203	583 aa	Known RBP	11.13	□□□□□ -0.63
SPS100	YHR139C	NTH2	P35172	780 aa		11.13	□□□□□ -0.63
SPS100	YHR139C	MPP10	P47083	593 aa	Known RBP	11.13	□□□□□ -0.63
SPS100	YHR139C	EDE1	P34216	1381 aa		11.13	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms