RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C SSA1P10591 642 aaKnown RBP7.29□□□□□ -1.24
PXR1YGR280C TIF11P38912 153 aaKnown RBP7.29□□□□□ -1.24
PXR1YGR280C SEC7P11075 2009 aaKnown RBP7.27□□□□□ -1.25
PXR1YGR280C YBT1P32386 1661 aa7.26□□□□□ -1.25
PXR1YGR280C NSR1P27476 414 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25 RIP-Chip
PXR1YGR280C NUP188P52593 1655 aaKnown RBP7.21□□□□□ -1.26
PXR1YGR280C IML1P47170 1584 aa7.2□□□□□ -1.26
PXR1YGR280C LDB19Q12502 818 aa7.2□□□□□ -1.26
PXR1YGR280C BDF1P35817 686 aa7.18□□□□□ -1.26
PXR1YGR280C PTP3P40048 928 aa7.18□□□□□ -1.26
PXR1YGR280C CKB1P43639 278 aa7.18□□□□□ -1.26
PXR1YGR280C EPS1P40557 701 aa7.16□□□□□ -1.26
PXR1YGR280C PDR11P40550 1411 aa7.16□□□□□ -1.26
PXR1YGR280C IPL1P38991 367 aa7.15□□□□□ -1.26
PXR1YGR280C BCK1Q01389 1478 aa7.15□□□□□ -1.27
PXR1YGR280C VMR1P38735 1592 aa7.15□□□□□ -1.27
PXR1YGR280C TFA1P36100 482 aa7.13□□□□□ -1.27
PXR1YGR280C ENT1Q12518 454 aa7.12□□□□□ -1.27
PXR1YGR280C UBP1P25037 809 aa7.11□□□□□ -1.27
PXR1YGR280C YAP5P40574 245 aa7.11□□□□□ -1.27
PXR1YGR280C IMH1Q06704 911 aaKnown RBP7.11□□□□□ -1.27
PXR1YGR280C IFH1P39520 1085 aa7.1□□□□□ -1.27
PXR1YGR280C ENV9Q08651 330 aa7.1□□□□□ -1.27
PXR1YGR280C IOC2Q12072 812 aa7.1□□□□□ -1.27
PXR1YGR280C YBL086CP38177 466 aa7.09□□□□□ -1.27
PXR1YGR280C TYS1P36421 394 aaKnown RBP7.08□□□□□ -1.28
PXR1YGR280C UGA2P38067 497 aa7.07□□□□□ -1.28
PXR1YGR280C ULI1P43604 169 aa7.07□□□□□ -1.28
PXR1YGR280C CAT8P39113 1433 aa7.07□□□□□ -1.28
PXR1YGR280C LEU3P08638 886 aa7.01□□□□□ -1.29
PXR1YGR280C GTT3P39996 337 aa7.01□□□□□ -1.29
PXR1YGR280C SAS10Q12136 610 aaPredicted RBP7.01□□□□□ -1.29
PXR1YGR280C GEA1P47102 1408 aaPredicted RBP7.01□□□□□ -1.29
PXR1YGR280C PDR5P33302 1511 aaKnown RBP6.97□□□□□ -1.29
PXR1YGR280C RIA1P53893 1110 aa6.96□□□□□ -1.3
PXR1YGR280C TAF7Q05021 590 aa6.96□□□□□ -1.3
PXR1YGR280C RIM101P33400 625 aa6.95□□□□□ -1.3
PXR1YGR280C SSA2P10592 639 aaKnown RBP6.94□□□□□ -1.3
PXR1YGR280C RPN11P43588 306 aaKnown RBP6.94□□□□□ -1.3
PXR1YGR280C MRX12P47084 519 aa6.94□□□□□ -1.3
PXR1YGR280C ALD2P47771 506 aa6.94□□□□□ -1.3
PXR1YGR280C KRE5P22023 1365 aa6.94□□□□□ -1.3
PXR1YGR280C BCK2P33306 851 aa6.93□□□□□ -1.3
PXR1YGR280C YRF1-2P40105 1681 aa6.93□□□□□ -1.3
PXR1YGR280C YNR029CP53729 429 aaKnown RBP6.92□□□□□ -1.3
PXR1YGR280C LYS4P49367 693 aaPredicted RBP6.89□□□□□ -1.31
PXR1YGR280C RTG1P32607 177 aa6.88□□□□□ -1.31
PXR1YGR280C RGA1P39083 1007 aa6.88□□□□□ -1.31
PXR1YGR280C YJL181WP46987 611 aa6.88□□□□□ -1.31
PXR1YGR280C NCR1Q12200 1170 aa6.87□□□□□ -1.31
PXR1YGR280C CFT1Q06632 1357 aaKnown RBP6.86□□□□□ -1.31
PXR1YGR280C BUD21Q08492 214 aaPredicted RBP6.86□□□□□ -1.31
PXR1YGR280C EDE1P34216 1381 aa6.84□□□□□ -1.31
PXR1YGR280C GCN2P15442 1659 aa6.82□□□□□ -1.32
PXR1YGR280C SSA4P22202 642 aaKnown RBP6.82□□□□□ -1.32
PXR1YGR280C PRP45P28004 379 aaPredicted RBP6.82□□□□□ -1.32
PXR1YGR280C SRB8P25648 1427 aa6.81□□□□□ -1.32
PXR1YGR280C NPR2P39923 615 aa6.8□□□□□ -1.32
PXR1YGR280C DOT5P40553 215 aa6.8□□□□□ -1.32
PXR1YGR280C EAP1P36041 632 aaKnown RBP6.79□□□□□ -1.32
PXR1YGR280C PEX21P50091 288 aa6.79□□□□□ -1.32
PXR1YGR280C MSB4Q12317 492 aa6.79□□□□□ -1.32
PXR1YGR280C RRP5Q05022 1729 aaKnown RBP6.79□□□□□ -1.32
PXR1YGR280C PRP40P33203 583 aaKnown RBP6.77□□□□□ -1.33
PXR1YGR280C CTH1P47976 325 aa6.77□□□□□ -1.33
PXR1YGR280C SEC61P32915 480 aa6.76□□□□□ -1.33
PXR1YGR280C LAM6Q08001 693 aa6.75□□□□□ -1.33
PXR1YGR280C TY3B-IQ7LHG5 1498 aaKnown RBP6.74□□□□□ -1.33
PXR1YGR280C TAF5P38129 798 aa6.74□□□□□ -1.33
PXR1YGR280C PUS5Q06244 254 aa6.74□□□□□ -1.33
PXR1YGR280C TRP5P00931 707 aaKnown RBP6.73□□□□□ -1.33
PXR1YGR280C SDH2P21801 266 aa6.73□□□□□ -1.33
PXR1YGR280C YNL035CP53962 389 aaKnown RBP6.72□□□□□ -1.33
PXR1YGR280C FOX2Q02207 900 aaKnown RBP6.72□□□□□ -1.33
PXR1YGR280C CHL1P22516 861 aaPredicted RBP6.71□□□□□ -1.34
PXR1YGR280C IES2P40154 320 aa6.71□□□□□ -1.34
PXR1YGR280C PSK1P31374 1356 aa6.7□□□□□ -1.34
PXR1YGR280C DUS1P53759 423 aaKnown RBP6.7□□□□□ -1.34
PXR1YGR280C SQS1P53866 767 aaKnown RBP6.7□□□□□ -1.34
PXR1YGR280C ROM2P51862 1356 aaKnown RBP6.69□□□□□ -1.34
PXR1YGR280C MAC1P35192 417 aa6.69□□□□□ -1.34
PXR1YGR280C EAF6P47128 113 aa6.69□□□□□ -1.34
PXR1YGR280C PIB1Q06651 286 aa6.69□□□□□ -1.34
PXR1YGR280C URB1P34241 1764 aaKnown RBP6.69□□□□□ -1.34
PXR1YGR280C PRP5P21372 849 aaPredicted RBP6.67□□□□□ -1.34
PXR1YGR280C BBC1P47068 1157 aa6.67□□□□□ -1.34
PXR1YGR280C ALD3P54114 506 aa6.66□□□□□ -1.34
PXR1YGR280C RAD9P14737 1309 aa6.66□□□□□ -1.34
PXR1YGR280C YEF3P16521 1044 aaKnown RBP6.65□□□□□ -1.34
PXR1YGR280C SAP30P38429 201 aa6.65□□□□□ -1.34
PXR1YGR280C XDJ1P39102 459 aa6.65□□□□□ -1.34
PXR1YGR280C CAB1Q04430 367 aa6.65□□□□□ -1.34
PXR1YGR280C RSF2P46974 1380 aa6.65□□□□□ -1.35
PXR1YGR280C OXP1P28273 1286 aa6.64□□□□□ -1.35
PXR1YGR280C SPT7P35177 1332 aa6.63□□□□□ -1.35
PXR1YGR280C SET4P42948 560 aa6.63□□□□□ -1.35
PXR1YGR280C SAP155P43612 1002 aa6.63□□□□□ -1.35
PXR1YGR280C YOL036WQ08206 761 aa6.63□□□□□ -1.35
PXR1YGR280C PRE3P38624 215 aa6.62□□□□□ -1.35
PXR1YGR280C TOM1Q03280 3268 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms