RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W GAP1P19145 602 aaPredicted RBP4.16□□□□□ -1.74
BRP1YGL007W YDR444WQ04093 687 aa4.16□□□□□ -1.74
BRP1YGL007W TY1A-DR4O74302 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-HP0C2I4 478 aaKnown RBP4.15□□□□□ -1.75
BRP1YGL007W TY1A-AP0CX57 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-PR1P0CX58 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-ORP0CX59 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-PR2P0CX60 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-DR5P0CX65 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-ER2P0CX66 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-GR3P0CX67 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-LR1P0CX68 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-MR2P0CX69 440 aa4.15□□□□□ -1.75
BRP1YGL007W BDP1P46678 594 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-JR2P47099 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-DR1Q03856 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-ML1Q04706 440 aaKnown RBP4.15□□□□□ -1.75
BRP1YGL007W TY1A-BRQ12217 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-NL2Q12470 440 aa4.15□□□□□ -1.75
BRP1YGL007W TY1A-GR2Q12485 440 aa4.15□□□□□ -1.75
BRP1YGL007W HED1Q03937 162 aa4.14□□□□□ -1.75
BRP1YGL007W IFH1P39520 1085 aa4.13□□□□□ -1.75
BRP1YGL007W PAT1P25644 796 aaKnown RBP4.12□□□□□ -1.75
BRP1YGL007W RRN7P40992 514 aa4.12□□□□□ -1.75
BRP1YGL007W KOG1P38873 1557 aa4.11□□□□□ -1.75
BRP1YGL007W LCB5Q06147 687 aaKnown RBP4.1□□□□□ -1.75
BRP1YGL007W YDL176WQ12027 708 aa4.1□□□□□ -1.75
BRP1YGL007W ASH1P34233 588 aa4.09□□□□□ -1.75
BRP1YGL007W ORC6P38826 435 aa4.08□□□□□ -1.76
BRP1YGL007W MVP1P40959 511 aaKnown RBP4.06□□□□□ -1.76
BRP1YGL007W REF2P42073 533 aaPredicted RBP4.06□□□□□ -1.76
BRP1YGL007W HST3P53687 447 aa4.06□□□□□ -1.76
BRP1YGL007W MET32Q12041 191 aa4.06□□□□□ -1.76
BRP1YGL007W AFT1P22149 690 aa4.05□□□□□ -1.76
BRP1YGL007W YPR109WQ06104 294 aa4.05□□□□□ -1.76
BRP1YGL007W RRD1P40454 393 aaKnown RBP4.04□□□□□ -1.76
BRP1YGL007W MTC5Q03897 1148 aa4.04□□□□□ -1.76
BRP1YGL007W HSL1P34244 1518 aa4.04□□□□□ -1.76
BRP1YGL007W SPT6P23615 1451 aaKnown RBP4.04□□□□□ -1.76
BRP1YGL007W KEX2P13134 814 aa4.02□□□□□ -1.77
BRP1YGL007W ERF2Q06551 359 aa4.02□□□□□ -1.77
BRP1YGL007W MOD5P07884 428 aa4.01□□□□□ -1.77
BRP1YGL007W RGR1P19263 1082 aa4.01□□□□□ -1.77
BRP1YGL007W YJR115WP47152 169 aa4.01□□□□□ -1.77
BRP1YGL007W PUS5Q06244 254 aa4.01□□□□□ -1.77
BRP1YGL007W PAC1P39946 494 aaKnown RBP4□□□□□ -1.77
BRP1YGL007W COX6P00427 148 aa3.99□□□□□ -1.77
BRP1YGL007W ECM5Q03214 1411 aa3.98□□□□□ -1.77
BRP1YGL007W CAF120P53836 1060 aa3.98□□□□□ -1.77
BRP1YGL007W MAK21Q12176 1025 aaKnown RBP3.97□□□□□ -1.77
BRP1YGL007W RQC2Q12532 1038 aaKnown RBP3.97□□□□□ -1.77
BRP1YGL007W SPA2P23201 1466 aaKnown RBP3.97□□□□□ -1.77
BRP1YGL007W ACO2P39533 789 aa3.96□□□□□ -1.78
BRP1YGL007W TUB4P53378 473 aa3.96□□□□□ -1.78
BRP1YGL007W YPR148CQ06523 435 aa3.96□□□□□ -1.78
BRP1YGL007W HIR3P47171 1648 aa3.95□□□□□ -1.78
BRP1YGL007W AGE1Q04412 482 aa3.95□□□□□ -1.78
BRP1YGL007W TRK2P28584 889 aa3.94□□□□□ -1.78
BRP1YGL007W MSB3P48566 633 aaPredicted RBP3.93□□□□□ -1.78
BRP1YGL007W OPT2Q06593 877 aa3.93□□□□□ -1.78
BRP1YGL007W BUD4P47136 1447 aa3.93□□□□□ -1.78
BRP1YGL007W YGR035CP53222 116 aa3.92□□□□□ -1.78
BRP1YGL007W YLR346CQ06139 101 aa3.92□□□□□ -1.78
BRP1YGL007W UGA3P26370 528 aa3.91□□□□□ -1.78
BRP1YGL007W VPS70P47161 811 aa3.91□□□□□ -1.78
BRP1YGL007W SRF1Q12516 437 aa3.91□□□□□ -1.78
BRP1YGL007W PTK2P47116 818 aaKnown RBP3.9□□□□□ -1.79
BRP1YGL007W KXD1P53158 218 aa3.9□□□□□ -1.79
BRP1YGL007W SYH1Q02875 849 aaKnown RBP3.9□□□□□ -1.79
BRP1YGL007W XRN1P22147 1528 aaKnown RBP3.9□□□□□ -1.79
BRP1YGL007W THO2P53552 1597 aaKnown RBP3.89□□□□□ -1.79
BRP1YGL007W RTF1P53064 558 aa3.89□□□□□ -1.79
BRP1YGL007W SSN2P38931 1420 aa3.88□□□□□ -1.79
BRP1YGL007W TPD3P31383 635 aa3.88□□□□□ -1.79
BRP1YGL007W HXT10P43581 546 aa3.88□□□□□ -1.79
BRP1YGL007W YNL115CP53925 644 aa3.88□□□□□ -1.79
BRP1YGL007W HPF1Q05164 967 aa3.88□□□□□ -1.79
BRP1YGL007W YIR007WP40566 764 aa3.87□□□□□ -1.79
BRP1YGL007W MDS3P53094 1487 aa3.86□□□□□ -1.79
BRP1YGL007W CLB5P30283 435 aa3.86□□□□□ -1.79
BRP1YGL007W PSE1P32337 1089 aaKnown RBP3.86□□□□□ -1.79
BRP1YGL007W GLY1P37303 387 aaKnown RBP3.86□□□□□ -1.79
BRP1YGL007W PEP1P32319 1579 aa3.85□□□□□ -1.79
BRP1YGL007W NUP85P46673 744 aa3.85□□□□□ -1.79
BRP1YGL007W SCW11P53189 542 aa3.85□□□□□ -1.79
BRP1YGL007W TYW1Q08960 810 aaKnown RBP3.85□□□□□ -1.79
BRP1YGL007W MIP1P15801 1254 aa3.84□□□□□ -1.79
BRP1YGL007W ICP55P40051 511 aa3.84□□□□□ -1.79
BRP1YGL007W TY1A-BLQ12266 440 aa3.84□□□□□ -1.79
BRP1YGL007W PDC1P06169 563 aaKnown RBP3.83□□□□□ -1.8
BRP1YGL007W KIP2P28743 706 aa3.83□□□□□ -1.8
BRP1YGL007W DMA1P38823 416 aa3.83□□□□□ -1.8
BRP1YGL007W SIT4P20604 311 aa3.82□□□□□ -1.8
BRP1YGL007W YPR204WQ08995 1032 aa3.82□□□□□ -1.8
BRP1YGL007W LSB3P43603 459 aaKnown RBP3.81□□□□□ -1.8
BRP1YGL007W PUS1Q12211 544 aaKnown RBP3.81□□□□□ -1.8
BRP1YGL007W ATG2P53855 1592 aa3.8□□□□□ -1.8
BRP1YGL007W REV3P14284 1504 aa3.8□□□□□ -1.8
BRP1YGL007W MRT4P33201 236 aaKnown RBP3.8□□□□□ -1.8
BRP1YGL007W IXR1P33417 597 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms