RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W TFB3Q03290 321 aa5.66□□□□□ -1.5
SWP82YFL049W SPA2P23201 1466 aaKnown RBP5.65□□□□□ -1.5
SWP82YFL049W ARH1P48360 493 aa5.65□□□□□ -1.5
SWP82YFL049W YPR109WQ06104 294 aa5.65□□□□□ -1.5
SWP82YFL049W ISU2Q12056 156 aa5.65□□□□□ -1.5
SWP82YFL049W BMT6Q12291 365 aa5.65□□□□□ -1.5
SWP82YFL049W PKC1P24583 1151 aa5.64□□□□□ -1.51
SWP82YFL049W ATF2P53296 535 aa5.64□□□□□ -1.51
SWP82YFL049W TFB4Q12004 338 aa5.64□□□□□ -1.51
SWP82YFL049W BRN1P38170 754 aa5.64□□□□□ -1.51
SWP82YFL049W TUM1Q08686 304 aaKnown RBP5.64□□□□□ -1.51
SWP82YFL049W RPP1BP10622 106 aaKnown RBP5.63□□□□□ -1.51
SWP82YFL049W RRN6P32786 894 aa5.63□□□□□ -1.51
SWP82YFL049W SPC42P36094 363 aa5.63□□□□□ -1.51
SWP82YFL049W YJL171CP46992 396 aa5.63□□□□□ -1.51
SWP82YFL049W FAR11P53917 953 aa5.63□□□□□ -1.51
SWP82YFL049W HAP5Q02516 242 aa5.63□□□□□ -1.51
SWP82YFL049W PDR1P12383 1068 aa5.62□□□□□ -1.51
SWP82YFL049W SWE1P32944 819 aa5.62□□□□□ -1.51
SWP82YFL049W YRR1Q12172 810 aa5.62□□□□□ -1.51
SWP82YFL049W HPC2Q01448 625 aa5.62□□□□□ -1.51
SWP82YFL049W YTA7P40340 1379 aa5.61□□□□□ -1.51
SWP82YFL049W GLN1P32288 370 aaKnown RBP5.61□□□□□ -1.51
SWP82YFL049W NUG1P40010 520 aaKnown RBP5.61□□□□□ -1.51
SWP82YFL049W TEA1P47988 759 aa5.61□□□□□ -1.51
SWP82YFL049W PEX21P50091 288 aa5.61□□□□□ -1.51
SWP82YFL049W RAM1P22007 431 aa5.6□□□□□ -1.51
SWP82YFL049W NIS1P53939 407 aa5.6□□□□□ -1.51
SWP82YFL049W SEN54Q02825 467 aaPredicted RBP5.6□□□□□ -1.51
SWP82YFL049W ELP4Q02884 456 aaKnown RBP5.6□□□□□ -1.51
SWP82YFL049W PRE3P38624 215 aa5.59□□□□□ -1.51
SWP82YFL049W BIM1P40013 344 aa5.59□□□□□ -1.51
SWP82YFL049W SLD2P34252 453 aa5.58□□□□□ -1.52
SWP82YFL049W OCA5P38738 679 aa5.58□□□□□ -1.52
SWP82YFL049W BNI4P53858 892 aa5.58□□□□□ -1.52
SWP82YFL049W YPR015CQ12531 247 aa5.58□□□□□ -1.52
SWP82YFL049W CLB5P30283 435 aa5.58□□□□□ -1.52
SWP82YFL049W ATG32P40458 529 aa5.58□□□□□ -1.52
SWP82YFL049W KTR1P27810 393 aaKnown RBP5.57□□□□□ -1.52
SWP82YFL049W HIR3P47171 1648 aa5.56□□□□□ -1.52
SWP82YFL049W YJR008WP47085 338 aa5.56□□□□□ -1.52
SWP82YFL049W STR2P47164 639 aa5.56□□□□□ -1.52
SWP82YFL049W SIT4P20604 311 aa5.56□□□□□ -1.52
SWP82YFL049W NUD1P32336 851 aa5.56□□□□□ -1.52
SWP82YFL049W SPT23P35210 1082 aa5.56□□□□□ -1.52
SWP82YFL049W FPK1P53739 893 aa5.56□□□□□ -1.52
SWP82YFL049W CHL1P22516 861 aaPredicted RBP5.55□□□□□ -1.52
SWP82YFL049W SSN2P38931 1420 aa5.55□□□□□ -1.52
SWP82YFL049W YJL007CP47080 104 aa5.55□□□□□ -1.52
SWP82YFL049W ISM1P48526 1002 aa5.55□□□□□ -1.52
SWP82YFL049W RTS3P53289 263 aa5.55□□□□□ -1.52
SWP82YFL049W DOS2P54858 310 aa5.55□□□□□ -1.52
SWP82YFL049W ERG12P07277 443 aa5.54□□□□□ -1.52
SWP82YFL049W SSA4P22202 642 aaKnown RBP5.54□□□□□ -1.52
SWP82YFL049W HEM3P28789 327 aa5.54□□□□□ -1.52
SWP82YFL049W SSF1P38789 453 aaPredicted RBP5.54□□□□□ -1.52
SWP82YFL049W ERF2Q06551 359 aa5.54□□□□□ -1.52
SWP82YFL049W NOB1Q08444 459 aaKnown RBP5.54□□□□□ -1.52
SWP82YFL049W TYW1Q08960 810 aaKnown RBP5.54□□□□□ -1.52
SWP82YFL049W SCJ1P25303 377 aa5.54□□□□□ -1.52
SWP82YFL049W CPS1P27614 576 aa5.54□□□□□ -1.52
SWP82YFL049W ALD4P46367 519 aaKnown RBP5.54□□□□□ -1.52
SWP82YFL049W TPO2P53283 614 aa5.53□□□□□ -1.52
SWP82YFL049W PTC2P39966 464 aaKnown RBP5.52□□□□□ -1.53
SWP82YFL049W CSN12P47130 423 aa5.52□□□□□ -1.53
SWP82YFL049W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SWP82YFL049W TY1A-DR4O74302 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-HP0C2I4 478 aaKnown RBP5.51□□□□□ -1.53
SWP82YFL049W TY1A-AP0CX57 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-PR1P0CX58 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-ORP0CX59 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-PR2P0CX60 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-DR5P0CX65 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-ER2P0CX66 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-GR3P0CX67 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-LR1P0CX68 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-MR2P0CX69 440 aa5.51□□□□□ -1.53
SWP82YFL049W KEX2P13134 814 aa5.51□□□□□ -1.53
SWP82YFL049W SEC2P17065 759 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-JR2P47099 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-DR1Q03856 440 aa5.51□□□□□ -1.53
SWP82YFL049W YML082WQ04533 649 aaKnown RBP5.51□□□□□ -1.53
SWP82YFL049W TY1A-ML1Q04706 440 aaKnown RBP5.51□□□□□ -1.53
SWP82YFL049W BUD20Q08004 166 aaPredicted RBP5.51□□□□□ -1.53
SWP82YFL049W TY1A-BRQ12217 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-NL2Q12470 440 aa5.51□□□□□ -1.53
SWP82YFL049W TY1A-GR2Q12485 440 aa5.51□□□□□ -1.53
SWP82YFL049W HST2P53686 357 aa5.51□□□□□ -1.53
SWP82YFL049W XRN1P22147 1528 aaKnown RBP5.5□□□□□ -1.53
SWP82YFL049W CDC3P32457 520 aaKnown RBP5.5□□□□□ -1.53
SWP82YFL049W YMR196WQ04336 1088 aa5.49□□□□□ -1.53
SWP82YFL049W ECM5Q03214 1411 aa5.49□□□□□ -1.53
SWP82YFL049W ESS1P22696 170 aa5.49□□□□□ -1.53
SWP82YFL049W TIF1P10081 395 aaKnown RBP5.48□□□□□ -1.53
SWP82YFL049W YJU3P28321 313 aa5.48□□□□□ -1.53
SWP82YFL049W ALD2P47771 506 aa5.48□□□□□ -1.53
SWP82YFL049W MDG1P53885 366 aa5.48□□□□□ -1.53
SWP82YFL049W RPL34AP87262 121 aaPredicted RBP5.48□□□□□ -1.53
SWP82YFL049W HAT1Q12341 374 aa5.48□□□□□ -1.53
SWP82YFL049W BUD4P47136 1447 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms