RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A RAD54P32863 898 aa3.96□□□□□ -1.78
YFL002W-AYFL002W-A STM1P39015 273 aaKnown RBP3.96□□□□□ -1.78
YFL002W-AYFL002W-A ILV3P39522 585 aaKnown RBP3.96□□□□□ -1.78
YFL002W-AYFL002W-A CST6P40535 587 aa3.95□□□□□ -1.78
YFL002W-AYFL002W-A SIS2P36024 562 aa3.95□□□□□ -1.78
YFL002W-AYFL002W-A UBP10P53874 792 aaPredicted RBP3.95□□□□□ -1.78
YFL002W-AYFL002W-A CWC15Q03772 175 aaKnown RBP3.94□□□□□ -1.78
YFL002W-AYFL002W-A ITT1Q04638 464 aa3.94□□□□□ -1.78
YFL002W-AYFL002W-A HAA1Q12753 694 aaKnown RBP3.94□□□□□ -1.78
YFL002W-AYFL002W-A SWE1P32944 819 aa3.94□□□□□ -1.78
YFL002W-AYFL002W-A PKH3Q03306 898 aaPredicted RBP3.94□□□□□ -1.78
YFL002W-AYFL002W-A MAK16P10962 306 aaPredicted RBP3.93□□□□□ -1.78
YFL002W-AYFL002W-A NSR1P27476 414 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
YFL002W-AYFL002W-A ASF1P32447 279 aa3.93□□□□□ -1.78
YFL002W-AYFL002W-A MMP1Q12372 583 aa3.93□□□□□ -1.78
YFL002W-AYFL002W-A YAF9P53930 226 aa3.93□□□□□ -1.78
YFL002W-AYFL002W-A GRE2Q12068 342 aaKnown RBP3.93□□□□□ -1.78
YFL002W-AYFL002W-A SAM3Q08986 587 aa3.93□□□□□ -1.78
YFL002W-AYFL002W-A SEC20P28791 383 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A YHL050CP38721 697 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A YHR219WP38900 624 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A YEL077CQ3E7X8 1277 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A KIC1P38692 1080 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A FPR4Q06205 392 aaPredicted RBP3.92□□□□□ -1.78
YFL002W-AYFL002W-A CLB5P30283 435 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A ATH1P48016 1211 aa3.92□□□□□ -1.78
YFL002W-AYFL002W-A POL32P47110 350 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A PIB1Q06651 286 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A SPT5P27692 1063 aaKnown RBP3.91□□□□□ -1.78
YFL002W-AYFL002W-A PPX1P38698 397 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A YJR107WP47145 328 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A SLX5P32828 619 aaKnown RBP3.91□□□□□ -1.78
YFL002W-AYFL002W-A SEC8P32855 1065 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A NMD2P38798 1089 aaKnown RBP3.91□□□□□ -1.78
YFL002W-AYFL002W-A ECM23Q02710 187 aa3.91□□□□□ -1.78
YFL002W-AYFL002W-A BOL3P39724 118 aa3.9□□□□□ -1.78
YFL002W-AYFL002W-A SVF1Q05515 481 aa3.9□□□□□ -1.78
YFL002W-AYFL002W-A IOC3P43596 787 aa3.9□□□□□ -1.79
YFL002W-AYFL002W-A NUG1P40010 520 aaKnown RBP3.9□□□□□ -1.79
YFL002W-AYFL002W-A FRT1Q99332 602 aa3.9□□□□□ -1.79
YFL002W-AYFL002W-A GAL2P13181 574 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A MET4P32389 672 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A NNF1P47149 201 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A ARG8P18544 423 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A RNH70P53331 553 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A URN1Q06525 465 aaKnown RBP3.89□□□□□ -1.79
YFL002W-AYFL002W-A YPR109WQ06104 294 aa3.89□□□□□ -1.79
YFL002W-AYFL002W-A OYE2Q03558 400 aaKnown RBP3.88□□□□□ -1.79
YFL002W-AYFL002W-A YOL098CQ12496 1037 aa3.88□□□□□ -1.79
YFL002W-AYFL002W-A YJR008WP47085 338 aa3.88□□□□□ -1.79
YFL002W-AYFL002W-A CIT2P08679 460 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A FYV10P40492 516 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A ALD3P54114 506 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A UBX5Q06682 500 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A MCM16Q12262 181 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A YMR196WQ04336 1088 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A UBX7P38349 436 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A MNL2Q12205 849 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A SLI15P38283 698 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A NAF1P53919 492 aaKnown RBP3.87□□□□□ -1.79
YFL002W-AYFL002W-A PUF6Q04373 656 aaKnown RBP3.87□□□□□ -1.79
YFL002W-AYFL002W-A NUT2Q06213 157 aa3.87□□□□□ -1.79
YFL002W-AYFL002W-A MPH3P0CE00 602 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A ATG1P53104 897 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A AI4P03878 556 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A MET1P36150 593 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A BUD6P41697 788 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A KAR5Q04746 504 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A APL6P46682 809 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A ROM1P53046 1155 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A CSC1Q06538 782 aa3.86□□□□□ -1.79
YFL002W-AYFL002W-A GRS1P38088 690 aaKnown RBP3.86□□□□□ -1.79
YFL002W-AYFL002W-A KTR7P40504 517 aa3.85□□□□□ -1.79
YFL002W-AYFL002W-A JSN1P47135 1091 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
YFL002W-AYFL002W-A TAT2P38967 592 aa3.85□□□□□ -1.79
YFL002W-AYFL002W-A TPO2P53283 614 aa3.85□□□□□ -1.79
YFL002W-AYFL002W-A GPI13Q07830 1017 aa3.85□□□□□ -1.79
YFL002W-AYFL002W-A RTS3P53289 263 aa3.84□□□□□ -1.79
YFL002W-AYFL002W-A JIP5Q06214 492 aaPredicted RBP3.84□□□□□ -1.79
YFL002W-AYFL002W-A CDC73Q06697 393 aa3.84□□□□□ -1.79
YFL002W-AYFL002W-A ISF1P32488 338 aa3.84□□□□□ -1.8
YFL002W-AYFL002W-A PNP1Q05788 311 aa3.84□□□□□ -1.8
YFL002W-AYFL002W-A YPR084WQ06821 456 aa3.84□□□□□ -1.8
YFL002W-AYFL002W-A ACS2P52910 683 aaKnown RBP3.84□□□□□ -1.8
YFL002W-AYFL002W-A SSF2Q12153 453 aaPredicted RBP3.84□□□□□ -1.8
YFL002W-AYFL002W-A GYP5Q12344 894 aa3.84□□□□□ -1.8
YFL002W-AYFL002W-A YAP5P40574 245 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A ALG12P53730 551 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A TRM1P15565 570 aaKnown RBP3.83□□□□□ -1.8
YFL002W-AYFL002W-A VAC8P39968 578 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A VPS16Q03308 798 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A YPP1P46951 817 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A RPN4Q03465 531 aa3.83□□□□□ -1.8
YFL002W-AYFL002W-A SLY41P22215 453 aa3.82□□□□□ -1.8
YFL002W-AYFL002W-A TFB4Q12004 338 aa3.82□□□□□ -1.8
YFL002W-AYFL002W-A SUV3P32580 737 aa3.82□□□□□ -1.8
YFL002W-AYFL002W-A ACF4P47129 309 aa3.82□□□□□ -1.8
YFL002W-AYFL002W-A ALD6P54115 500 aaKnown RBP3.82□□□□□ -1.8
YFL002W-AYFL002W-A SPR28Q04921 423 aa3.82□□□□□ -1.8
YFL002W-AYFL002W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms