RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C TRK1P12685 1235 aa13.64□□□□□ -0.23
CCA1YER168C VPS27P40343 622 aaKnown RBP13.63□□□□□ -0.23
CCA1YER168C CDC45Q08032 650 aa13.62□□□□□ -0.23
CCA1YER168C FUN12P39730 1002 aaKnown RBP13.61□□□□□ -0.23
CCA1YER168C IOC4Q04213 475 aa13.61□□□□□ -0.23
CCA1YER168C DNF3Q12674 1656 aa13.61□□□□□ -0.23
CCA1YER168C KRE5P22023 1365 aa13.61□□□□□ -0.23
CCA1YER168C YDL144CQ07589 356 aa13.58□□□□□ -0.24
CCA1YER168C RVB2Q12464 471 aaKnown RBP13.58□□□□□ -0.24
CCA1YER168C SNF2P22082 1703 aa13.56□□□□□ -0.24
CCA1YER168C TFA1P36100 482 aa13.56□□□□□ -0.24
CCA1YER168C MRX12P47084 519 aa13.56□□□□□ -0.24
CCA1YER168C PSK1P31374 1356 aa13.54□□□□□ -0.24
CCA1YER168C RCM1P53972 490 aa13.53□□□□□ -0.24
CCA1YER168C RIA1P53893 1110 aa13.51□□□□□ -0.25
CCA1YER168C SUI2P20459 304 aaKnown RBP13.5□□□□□ -0.25
CCA1YER168C PPH3P32345 308 aa13.5□□□□□ -0.25
CCA1YER168C MPP10P47083 593 aaKnown RBP13.5□□□□□ -0.25
CCA1YER168C RRP46P53256 223 aaPredicted RBP13.49□□□□□ -0.25
CCA1YER168C YRB30P53107 440 aaPredicted RBP13.46□□□□□ -0.26
CCA1YER168C KAR2P16474 682 aaKnown RBP13.42□□□□□ -0.26
CCA1YER168C RTR1P40084 226 aaPredicted RBP13.42□□□□□ -0.26
CCA1YER168C TAP42Q04372 366 aa13.42□□□□□ -0.26
CCA1YER168C MAK10Q02197 733 aa13.41□□□□□ -0.26
CCA1YER168C AUS1Q08409 1394 aa13.41□□□□□ -0.26
CCA1YER168C PDI1P17967 522 aaKnown RBP13.39□□□□□ -0.27
CCA1YER168C CPS1P27614 576 aa13.39□□□□□ -0.27
CCA1YER168C LEU2P04173 364 aaPredicted RBP13.39□□□□□ -0.27
CCA1YER168C NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.39□□□□□ -0.27not detected
CCA1YER168C HIM1Q06674 414 aa13.39□□□□□ -0.27
CCA1YER168C SAP155P43612 1002 aa13.38□□□□□ -0.27
CCA1YER168C YNR029CP53729 429 aaKnown RBP13.38□□□□□ -0.27
CCA1YER168C RPC31P17890 251 aa13.37□□□□□ -0.27
CCA1YER168C FPR3P38911 411 aaKnown RBP13.37□□□□□ -0.27
CCA1YER168C PRD1P25375 712 aa13.35□□□□□ -0.27
CCA1YER168C THI22Q06490 572 aa13.35□□□□□ -0.27
CCA1YER168C MTR4P47047 1073 aaKnown RBP13.34□□□□□ -0.27
CCA1YER168C USO1P25386 1790 aa13.33□□□□□ -0.28
CCA1YER168C GRX4P32642 244 aa13.32□□□□□ -0.28
CCA1YER168C PAP2P53632 584 aaKnown RBP13.32□□□□□ -0.28
CCA1YER168C TY1B-NL2Q99337 1749 aaKnown RBP13.32□□□□□ -0.28
CCA1YER168C TPD3P31383 635 aa13.31□□□□□ -0.28
CCA1YER168C RTF1P53064 558 aa13.31□□□□□ -0.28
CCA1YER168C HEF3P53978 1044 aaKnown RBP13.31□□□□□ -0.28
CCA1YER168C ADE6P38972 1358 aaKnown RBP13.28□□□□□ -0.28
CCA1YER168C RAD2P07276 1031 aa13.26□□□□□ -0.29
CCA1YER168C YIL092WP40497 633 aa13.26□□□□□ -0.29
CCA1YER168C RPS24AP0CX31 135 aaKnown RBP13.25□□□□□ -0.29
CCA1YER168C RPS24BP0CX32 135 aaKnown RBP13.25□□□□□ -0.29
CCA1YER168C RTT109Q07794 436 aa13.25□□□□□ -0.29
CCA1YER168C SIR4P11978 1358 aa13.25□□□□□ -0.29
CCA1YER168C RPO41P13433 1351 aaKnown RBP13.25□□□□□ -0.29
CCA1YER168C PRP43P53131 767 aaKnown RBP13.24□□□□□ -0.29
CCA1YER168C DAL5P15365 543 aa13.23□□□□□ -0.29
CCA1YER168C CSE4P36012 229 aa13.23□□□□□ -0.29
CCA1YER168C GAS4Q08271 471 aa13.23□□□□□ -0.29
CCA1YER168C OPY1P38271 328 aa13.21□□□□□ -0.3
CCA1YER168C ABP1P15891 592 aaKnown RBP13.2□□□□□ -0.3
CCA1YER168C BUD27P43573 796 aaKnown RBP RIP-Chip data13.2□□□□□ -0.3not detected
CCA1YER168C DPS1P04802 557 aaKnown RBP13.18□□□□□ -0.3
CCA1YER168C IME2P32581 645 aa13.18□□□□□ -0.3
CCA1YER168C POL32P47110 350 aa13.17□□□□□ -0.3
CCA1YER168C APC1P53886 1748 aa13.17□□□□□ -0.3
CCA1YER168C YRF1-4O13559 1382 aa13.16□□□□□ -0.3
CCA1YER168C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.16□□□□□ -0.3not detected
CCA1YER168C TY4B-HP0C2J7 1802 aa13.15□□□□□ -0.3
CCA1YER168C TY4B-JP47024 1803 aa13.15□□□□□ -0.3
CCA1YER168C AKL1P38080 1108 aaKnown RBP13.15□□□□□ -0.3
CCA1YER168C MAK21Q12176 1025 aaKnown RBP13.15□□□□□ -0.3
CCA1YER168C YRF1-2P40105 1681 aa13.13□□□□□ -0.31
CCA1YER168C YIR014WP40570 242 aa13.13□□□□□ -0.31
CCA1YER168C YFR016CP43597 1233 aaKnown RBP13.12□□□□□ -0.31
CCA1YER168C YIL177CP40434 1758 aa13.11□□□□□ -0.31
CCA1YER168C YJL225CP40889 1758 aa13.11□□□□□ -0.31
CCA1YER168C RRP5Q05022 1729 aaKnown RBP13.11□□□□□ -0.31
CCA1YER168C DSD1P53095 428 aa13.11□□□□□ -0.31
CCA1YER168C PUF6Q04373 656 aaKnown RBP13.09□□□□□ -0.31
CCA1YER168C YNL050CP53952 270 aa13.07□□□□□ -0.32
CCA1YER168C YMR196WQ04336 1088 aa13.07□□□□□ -0.32
CCA1YER168C GYP7P48365 746 aa13.06□□□□□ -0.32
CCA1YER168C NTH2P35172 780 aa13.05□□□□□ -0.32
CCA1YER168C RRT14P40470 206 aa13.05□□□□□ -0.32
CCA1YER168C TRP5P00931 707 aaKnown RBP13.04□□□□□ -0.32
CCA1YER168C THI12P42883 340 aa13.03□□□□□ -0.32
CCA1YER168C THI5P43534 340 aa13.03□□□□□ -0.32
CCA1YER168C THI11P47183 340 aa13.03□□□□□ -0.32
CCA1YER168C THI13Q07748 340 aa13.03□□□□□ -0.32
CCA1YER168C ZDS1P50111 915 aaKnown RBP13.02□□□□□ -0.33
CCA1YER168C SRT1Q03175 343 aa13.01□□□□□ -0.33
CCA1YER168C MAM1P40065 302 aa13□□□□□ -0.33
CCA1YER168C EDE1P34216 1381 aa12.99□□□□□ -0.33
CCA1YER168C ILV3P39522 585 aaKnown RBP12.99□□□□□ -0.33
CCA1YER168C EAF7P53911 425 aaKnown RBP12.99□□□□□ -0.33
CCA1YER168C URB1P34241 1764 aaKnown RBP12.99□□□□□ -0.33
CCA1YER168C FKS3Q04952 1785 aa12.98□□□□□ -0.33
CCA1YER168C HSP104P31539 908 aaKnown RBP12.97□□□□□ -0.33
CCA1YER168C YBR287WP38355 427 aa12.97□□□□□ -0.33
CCA1YER168C PCT1P13259 424 aa12.95□□□□□ -0.34
CCA1YER168C CLC1P17891 233 aa12.95□□□□□ -0.34
CCA1YER168C CSI1Q04368 295 aa12.95□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms