RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W MHP1P43638 1398 aa8.99□□□□□ -0.97
MRPS28YDR337W YLR419WQ06698 1435 aaKnown RBP8.97□□□□□ -0.97
MRPS28YDR337W RCM1P53972 490 aa8.97□□□□□ -0.97
MRPS28YDR337W SPT7P35177 1332 aa8.97□□□□□ -0.97
MRPS28YDR337W CFT1Q06632 1357 aaKnown RBP8.97□□□□□ -0.97
MRPS28YDR337W LEU3P08638 886 aa8.96□□□□□ -0.98
MRPS28YDR337W PSD2P53037 1138 aaKnown RBP8.96□□□□□ -0.98
MRPS28YDR337W NUP192P47054 1683 aa8.96□□□□□ -0.98
MRPS28YDR337W THI12P42883 340 aa8.95□□□□□ -0.98
MRPS28YDR337W THI5P43534 340 aa8.95□□□□□ -0.98
MRPS28YDR337W THI11P47183 340 aa8.95□□□□□ -0.98
MRPS28YDR337W THI13Q07748 340 aa8.95□□□□□ -0.98
MRPS28YDR337W RTG3P38165 486 aa8.94□□□□□ -0.98
MRPS28YDR337W PPH3P32345 308 aa8.93□□□□□ -0.98
MRPS28YDR337W SEC3P33332 1336 aaKnown RBP8.93□□□□□ -0.98
MRPS28YDR337W FKH1P40466 484 aa8.91□□□□□ -0.98
MRPS28YDR337W YFR006WP43590 535 aa8.9□□□□□ -0.98
MRPS28YDR337W CPS1P27614 576 aa8.89□□□□□ -0.99
MRPS28YDR337W NST1P53935 1240 aa8.89□□□□□ -0.99
MRPS28YDR337W NSR1P27476 414 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
MRPS28YDR337W ENP1P38333 483 aaKnown RBP8.87□□□□□ -0.99
MRPS28YDR337W LEU2P04173 364 aaPredicted RBP8.85□□□□□ -0.99
MRPS28YDR337W PSK1P31374 1356 aa8.84□□□□□ -0.99
MRPS28YDR337W CSE4P36012 229 aa8.81□□□□□ -1
MRPS28YDR337W RPS24AP0CX31 135 aaKnown RBP8.8□□□□□ -1
MRPS28YDR337W RPS24BP0CX32 135 aaKnown RBP8.8□□□□□ -1
MRPS28YDR337W MTR4P47047 1073 aaKnown RBP8.8□□□□□ -1
MRPS28YDR337W YML133CQ03099 1374 aa8.8□□□□□ -1
MRPS28YDR337W YLL067CQ07888 1374 aa8.8□□□□□ -1
MRPS28YDR337W YLL066CQ99208 1374 aa8.8□□□□□ -1
MRPS28YDR337W TRK1P12685 1235 aa8.78□□□□□ -1
MRPS28YDR337W YEF3P16521 1044 aaKnown RBP8.78□□□□□ -1
MRPS28YDR337W RTF1P53064 558 aa8.76□□□□□ -1.01
MRPS28YDR337W PRP43P53131 767 aaKnown RBP8.76□□□□□ -1.01
MRPS28YDR337W HIM1Q06674 414 aa8.76□□□□□ -1.01
MRPS28YDR337W TY1B-NL2Q99337 1749 aaKnown RBP8.76□□□□□ -1.01
MRPS28YDR337W PDI1P17967 522 aaKnown RBP8.75□□□□□ -1.01
MRPS28YDR337W GAS4Q08271 471 aa8.75□□□□□ -1.01
MRPS28YDR337W PTP3P40048 928 aa8.74□□□□□ -1.01
MRPS28YDR337W KAR2P16474 682 aaKnown RBP8.73□□□□□ -1.01
MRPS28YDR337W PRP45P28004 379 aaPredicted RBP8.73□□□□□ -1.01
MRPS28YDR337W TAP42Q04372 366 aa8.73□□□□□ -1.01
MRPS28YDR337W PRP5P21372 849 aaPredicted RBP8.72□□□□□ -1.01
MRPS28YDR337W ADE6P38972 1358 aaKnown RBP8.72□□□□□ -1.01
MRPS28YDR337W DPS1P04802 557 aaKnown RBP8.71□□□□□ -1.02
MRPS28YDR337W PAP2P53632 584 aaKnown RBP8.71□□□□□ -1.02
MRPS28YDR337W GRX4P32642 244 aa8.7□□□□□ -1.02
MRPS28YDR337W USO1P25386 1790 aa8.69□□□□□ -1.02
MRPS28YDR337W PRS1P32895 427 aaKnown RBP8.69□□□□□ -1.02
MRPS28YDR337W ENT1Q12518 454 aa8.67□□□□□ -1.02
MRPS28YDR337W AUS1Q08409 1394 aa8.66□□□□□ -1.02
MRPS28YDR337W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
MRPS28YDR337W RRP46P53256 223 aaPredicted RBP8.66□□□□□ -1.02
MRPS28YDR337W YDL144CQ07589 356 aa8.66□□□□□ -1.02
MRPS28YDR337W RTR1P40084 226 aaPredicted RBP8.65□□□□□ -1.02
MRPS28YDR337W MSB3P48566 633 aaPredicted RBP8.65□□□□□ -1.02
MRPS28YDR337W APP1P53933 587 aa8.65□□□□□ -1.02
MRPS28YDR337W IOC4Q04213 475 aa8.65□□□□□ -1.02
MRPS28YDR337W MPP10P47083 593 aaKnown RBP8.64□□□□□ -1.03
MRPS28YDR337W SLM3Q12093 417 aa8.64□□□□□ -1.03
MRPS28YDR337W REB1P21538 810 aa8.63□□□□□ -1.03
MRPS28YDR337W ENV9Q08651 330 aa8.62□□□□□ -1.03
MRPS28YDR337W TCB1Q12466 1186 aa8.62□□□□□ -1.03
MRPS28YDR337W VPS27P40343 622 aaKnown RBP8.61□□□□□ -1.03
MRPS28YDR337W YAH1Q12184 172 aaKnown RBP8.61□□□□□ -1.03
MRPS28YDR337W RPP0P05317 312 aaKnown RBP8.6□□□□□ -1.03
MRPS28YDR337W PRD1P25375 712 aa8.59□□□□□ -1.03
MRPS28YDR337W AKL1P38080 1108 aaKnown RBP8.59□□□□□ -1.03
MRPS28YDR337W XKS1P42826 600 aa8.59□□□□□ -1.03
MRPS28YDR337W CDC45Q08032 650 aa8.59□□□□□ -1.03
MRPS28YDR337W SAP155P43612 1002 aa8.58□□□□□ -1.04
MRPS28YDR337W THI22Q06490 572 aa8.58□□□□□ -1.04
MRPS28YDR337W RVB2Q12464 471 aaKnown RBP8.58□□□□□ -1.04
MRPS28YDR337W SUI2P20459 304 aaKnown RBP8.57□□□□□ -1.04
MRPS28YDR337W DSD1P53095 428 aa8.57□□□□□ -1.04
MRPS28YDR337W RPO41P13433 1351 aaKnown RBP8.57□□□□□ -1.04
MRPS28YDR337W TPD3P31383 635 aa8.56□□□□□ -1.04
MRPS28YDR337W FUN12P39730 1002 aaKnown RBP8.56□□□□□ -1.04
MRPS28YDR337W RCR1P38212 213 aa8.55□□□□□ -1.04
MRPS28YDR337W IES2P40154 320 aa8.55□□□□□ -1.04
MRPS28YDR337W HSP104P31539 908 aaKnown RBP8.54□□□□□ -1.04
MRPS28YDR337W MLP1Q02455 1875 aaKnown RBP8.52□□□□□ -1.05
MRPS28YDR337W NTH2P35172 780 aa8.52□□□□□ -1.05
MRPS28YDR337W IMH1Q06704 911 aaKnown RBP8.52□□□□□ -1.05
MRPS28YDR337W RTT109Q07794 436 aa8.52□□□□□ -1.05
MRPS28YDR337W AOS1Q06624 347 aa8.51□□□□□ -1.05
MRPS28YDR337W YKL133CP36066 463 aa8.5□□□□□ -1.05
MRPS28YDR337W ZDS1P50111 915 aaKnown RBP8.5□□□□□ -1.05
MRPS28YDR337W YNL050CP53952 270 aa8.5□□□□□ -1.05
MRPS28YDR337W HEF3P53978 1044 aaKnown RBP8.5□□□□□ -1.05
MRPS28YDR337W RSF2P46974 1380 aa8.49□□□□□ -1.05
MRPS28YDR337W CTF4Q01454 927 aa8.49□□□□□ -1.05
MRPS28YDR337W YBR287WP38355 427 aa8.48□□□□□ -1.05
MRPS28YDR337W RRT14P40470 206 aa8.48□□□□□ -1.05
MRPS28YDR337W YIL055CP40523 627 aaKnown RBP8.48□□□□□ -1.05
MRPS28YDR337W YRF1-4O13559 1382 aa8.48□□□□□ -1.05
MRPS28YDR337W MEC3Q02574 474 aa8.47□□□□□ -1.05
MRPS28YDR337W MAM1P40065 302 aa8.46□□□□□ -1.06
MRPS28YDR337W GYP7P48365 746 aa8.46□□□□□ -1.06
MRPS28YDR337W YRB30P53107 440 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms