RNA–Protein interactions for RNA: YDR178W

SDH4, Transcript of Membrane anchor subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SDH4, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH4YDR178W YML133CQ03099 1374 aa8.54□□□□□ -1.04
SDH4YDR178W YLL067CQ07888 1374 aa8.54□□□□□ -1.04
SDH4YDR178W YLL066CQ99208 1374 aa8.54□□□□□ -1.04
SDH4YDR178W TY4B-HP0C2J7 1802 aa8.53□□□□□ -1.04
SDH4YDR178W TY4B-JP47024 1803 aa8.53□□□□□ -1.04
SDH4YDR178W ADE6P38972 1358 aaKnown RBP8.51□□□□□ -1.05
SDH4YDR178W POL5P39985 1022 aaKnown RBP8.5□□□□□ -1.05
SDH4YDR178W CHZ1P40019 153 aaPredicted RBP8.5□□□□□ -1.05
SDH4YDR178W RRP5Q05022 1729 aaKnown RBP8.49□□□□□ -1.05
SDH4YDR178W MHP1P43638 1398 aa8.48□□□□□ -1.05
SDH4YDR178W YAH1Q12184 172 aaKnown RBP8.47□□□□□ -1.05
SDH4YDR178W PRY3P47033 881 aa8.46□□□□□ -1.06
SDH4YDR178W APP1P53933 587 aa8.46□□□□□ -1.06
SDH4YDR178W REB1P21538 810 aa8.45□□□□□ -1.06
SDH4YDR178W FKH1P40466 484 aa8.44□□□□□ -1.06
SDH4YDR178W MLP1Q02455 1875 aaKnown RBP8.43□□□□□ -1.06
SDH4YDR178W YRF1-2P40105 1681 aa8.43□□□□□ -1.06
SDH4YDR178W YIL177CP40434 1758 aa8.43□□□□□ -1.06
SDH4YDR178W YJL225CP40889 1758 aa8.43□□□□□ -1.06
SDH4YDR178W PRP43P53131 767 aaKnown RBP8.42□□□□□ -1.06
SDH4YDR178W LEU2P04173 364 aaPredicted RBP8.41□□□□□ -1.06
SDH4YDR178W RTG3P38165 486 aa8.41□□□□□ -1.06
SDH4YDR178W PRP45P28004 379 aaPredicted RBP8.4□□□□□ -1.06
SDH4YDR178W MTR4P47047 1073 aaKnown RBP8.4□□□□□ -1.06
SDH4YDR178W PDS5Q04264 1277 aa8.4□□□□□ -1.06
SDH4YDR178W ENT1Q12518 454 aa8.4□□□□□ -1.06
SDH4YDR178W RPS24AP0CX31 135 aaKnown RBP8.39□□□□□ -1.07
SDH4YDR178W RPS24BP0CX32 135 aaKnown RBP8.39□□□□□ -1.07
SDH4YDR178W PRP5P21372 849 aaPredicted RBP8.38□□□□□ -1.07
SDH4YDR178W NST1P53935 1240 aa8.38□□□□□ -1.07
SDH4YDR178W ENV9Q08651 330 aa8.38□□□□□ -1.07
SDH4YDR178W SCT1P32784 759 aa8.37□□□□□ -1.07
SDH4YDR178W MSB3P48566 633 aaPredicted RBP8.37□□□□□ -1.07
SDH4YDR178W AUS1Q08409 1394 aa8.36□□□□□ -1.07
SDH4YDR178W CSE4P36012 229 aa8.36□□□□□ -1.07
SDH4YDR178W YEF3P16521 1044 aaKnown RBP8.33□□□□□ -1.08
SDH4YDR178W YIL055CP40523 627 aaKnown RBP8.33□□□□□ -1.08
SDH4YDR178W URB1P34241 1764 aaKnown RBP8.33□□□□□ -1.08
SDH4YDR178W PSD2P53037 1138 aaKnown RBP8.32□□□□□ -1.08
SDH4YDR178W SLM3Q12093 417 aa8.32□□□□□ -1.08
SDH4YDR178W PDI1P17967 522 aaKnown RBP8.31□□□□□ -1.08
SDH4YDR178W TAP42Q04372 366 aa8.31□□□□□ -1.08
SDH4YDR178W APC1P53886 1748 aa8.31□□□□□ -1.08
SDH4YDR178W FKS3Q04952 1785 aa8.3□□□□□ -1.08
SDH4YDR178W HIM1Q06674 414 aa8.3□□□□□ -1.08
SDH4YDR178W IMH1Q06704 911 aaKnown RBP8.3□□□□□ -1.08
SDH4YDR178W YRF1-3P0CX14 1859 aa8.3□□□□□ -1.08
SDH4YDR178W YRF1-7P0CX15 1859 aa8.3□□□□□ -1.08
SDH4YDR178W YRF1-6P53819 1859 aa8.3□□□□□ -1.08
SDH4YDR178W GAS4Q08271 471 aa8.29□□□□□ -1.08
SDH4YDR178W RSF2P46974 1380 aa8.29□□□□□ -1.08
SDH4YDR178W DPS1P04802 557 aaKnown RBP8.28□□□□□ -1.08
SDH4YDR178W TRK1P12685 1235 aa8.28□□□□□ -1.08
SDH4YDR178W GLN1P32288 370 aaKnown RBP8.28□□□□□ -1.08
SDH4YDR178W TCB1Q12466 1186 aa8.28□□□□□ -1.08
SDH4YDR178W SPT7P35177 1332 aa8.28□□□□□ -1.08
SDH4YDR178W RTF1P53064 558 aa8.26□□□□□ -1.09
SDH4YDR178W SEC3P33332 1336 aaKnown RBP8.26□□□□□ -1.09
SDH4YDR178W GRX4P32642 244 aa8.25□□□□□ -1.09
SDH4YDR178W IES2P40154 320 aa8.25□□□□□ -1.09
SDH4YDR178W XKS1P42826 600 aa8.24□□□□□ -1.09
SDH4YDR178W LEU3P08638 886 aa8.22□□□□□ -1.09
SDH4YDR178W KAR2P16474 682 aaKnown RBP8.22□□□□□ -1.09
SDH4YDR178W YMR074CQ04773 145 aa8.22□□□□□ -1.09
SDH4YDR178W SIR4P11978 1358 aa8.22□□□□□ -1.09
SDH4YDR178W RPO41P13433 1351 aaKnown RBP8.22□□□□□ -1.09
SDH4YDR178W DOT5P40553 215 aa8.21□□□□□ -1.1
SDH4YDR178W RRP46P53256 223 aaPredicted RBP8.21□□□□□ -1.1
SDH4YDR178W FOX2Q02207 900 aaKnown RBP8.2□□□□□ -1.1
SDH4YDR178W ROM2P51862 1356 aaKnown RBP8.2□□□□□ -1.1
SDH4YDR178W RCR1P38212 213 aa8.19□□□□□ -1.1
SDH4YDR178W SNF2P22082 1703 aa8.19□□□□□ -1.1
SDH4YDR178W YRF1-4O13559 1382 aa8.18□□□□□ -1.1
SDH4YDR178W YKL133CP36066 463 aa8.17□□□□□ -1.1
SDH4YDR178W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
SDH4YDR178W ADE16P54113 591 aaKnown RBP8.16□□□□□ -1.1
SDH4YDR178W BUD31P25337 157 aaPredicted RBP8.14□□□□□ -1.11
SDH4YDR178W YKR075CP36155 307 aa8.14□□□□□ -1.11
SDH4YDR178W ENP1P38333 483 aaKnown RBP8.14□□□□□ -1.11
SDH4YDR178W RPN11P43588 306 aaKnown RBP8.14□□□□□ -1.11
SDH4YDR178W DSD1P53095 428 aa8.14□□□□□ -1.11
SDH4YDR178W PAP2P53632 584 aaKnown RBP8.14□□□□□ -1.11
SDH4YDR178W FRK1Q03002 865 aaPredicted RBP8.14□□□□□ -1.11
SDH4YDR178W COBP00163 385 aa8.13□□□□□ -1.11
SDH4YDR178W AKL1P38080 1108 aaKnown RBP8.13□□□□□ -1.11
SDH4YDR178W IOC4Q04213 475 aa8.13□□□□□ -1.11
SDH4YDR178W INP54Q08227 384 aaKnown RBP8.13□□□□□ -1.11
SDH4YDR178W NPR2P39923 615 aa8.12□□□□□ -1.11
SDH4YDR178W MEC3Q02574 474 aa8.1□□□□□ -1.11
SDH4YDR178W NUP145P49687 1317 aa8.09□□□□□ -1.11
SDH4YDR178W HSP104P31539 908 aaKnown RBP8.09□□□□□ -1.11
SDH4YDR178W RIM15P43565 1770 aa8.09□□□□□ -1.11
SDH4YDR178W OSM1P21375 501 aaKnown RBP8.08□□□□□ -1.12
SDH4YDR178W PRD1P25375 712 aa8.08□□□□□ -1.12
SDH4YDR178W NTH2P35172 780 aa8.08□□□□□ -1.12
SDH4YDR178W RTR1P40084 226 aaPredicted RBP8.08□□□□□ -1.12
SDH4YDR178W EDE1P34216 1381 aa8.08□□□□□ -1.12
SDH4YDR178W THI22Q06490 572 aa8.07□□□□□ -1.12
SDH4YDR178W MPP10P47083 593 aaKnown RBP8.06□□□□□ -1.12
SDH4YDR178W CTF4Q01454 927 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms