RNA–Protein interactions for RNA: YDR170C

SEC7, Transcript of Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors, yeastyeast

Gene SEC7, Length 6,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC7YDR170C SUI2P20459 304 aaKnown RBP3.22□□□□□ -1.89
SEC7YDR170C ROX1P25042 368 aa3.22□□□□□ -1.89
SEC7YDR170C TIM50Q02776 476 aa3.22□□□□□ -1.89
SEC7YDR170C CAJ1P39101 391 aa3.21□□□□□ -1.9
SEC7YDR170C BBC1P47068 1157 aa3.21□□□□□ -1.9
SEC7YDR170C ECM16Q04217 1267 aaKnown RBP3.21□□□□□ -1.9
SEC7YDR170C ECM5Q03214 1411 aa3.21□□□□□ -1.9
SEC7YDR170C RRP8P38961 392 aaKnown RBP3.21□□□□□ -1.9
SEC7YDR170C TRP5P00931 707 aaKnown RBP3.21□□□□□ -1.9
SEC7YDR170C RIA1P53893 1110 aa3.21□□□□□ -1.9
SEC7YDR170C VPS20Q04272 221 aa3.21□□□□□ -1.9
SEC7YDR170C TSR3Q12094 313 aaKnown RBP3.21□□□□□ -1.9
SEC7YDR170C TOP1P04786 769 aa3.21□□□□□ -1.9
SEC7YDR170C SMC3P47037 1230 aa3.21□□□□□ -1.9
SEC7YDR170C PBY1P38254 753 aa3.2□□□□□ -1.9
SEC7YDR170C SSA2P10592 639 aaKnown RBP3.2□□□□□ -1.9
SEC7YDR170C YPR097WQ06839 1073 aa3.2□□□□□ -1.9
SEC7YDR170C TLG2Q08144 397 aa3.2□□□□□ -1.9
SEC7YDR170C ABP1P15891 592 aaKnown RBP3.2□□□□□ -1.9
SEC7YDR170C STM1P39015 273 aaKnown RBP3.2□□□□□ -1.9
SEC7YDR170C NKP2Q06162 153 aa3.2□□□□□ -1.9
SEC7YDR170C RRI2Q12348 645 aa3.2□□□□□ -1.9
SEC7YDR170C TRK1P12685 1235 aa3.2□□□□□ -1.9
SEC7YDR170C RGP1P16664 663 aa3.2□□□□□ -1.9
SEC7YDR170C TPM1P17536 199 aaKnown RBP3.2□□□□□ -1.9
SEC7YDR170C MET10P39692 1035 aa3.2□□□□□ -1.9
SEC7YDR170C RCM1P53972 490 aa3.2□□□□□ -1.9
SEC7YDR170C RNT1Q02555 471 aa3.2□□□□□ -1.9
SEC7YDR170C NKP1Q12493 238 aa3.2□□□□□ -1.9
SEC7YDR170C SCC2Q04002 1493 aa3.19□□□□□ -1.9
SEC7YDR170C MSP1P28737 362 aa3.19□□□□□ -1.9
SEC7YDR170C POL32P47110 350 aa3.19□□□□□ -1.9
SEC7YDR170C ENP2P48234 707 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C IMP2'P32351 346 aa3.19□□□□□ -1.9
SEC7YDR170C BUD6P41697 788 aa3.19□□□□□ -1.9
SEC7YDR170C RPS0BP46654 252 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C ZDS1P50111 915 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C TSC11P40061 1430 aa3.19□□□□□ -1.9
SEC7YDR170C RNR2P09938 399 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C STO1P34160 861 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C HUL5P53119 910 aa3.19□□□□□ -1.9
SEC7YDR170C PIL1P53252 339 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C RAD50P12753 1312 aa3.19□□□□□ -1.9
SEC7YDR170C PDI1P17967 522 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C TCD1P38756 429 aa3.19□□□□□ -1.9
SEC7YDR170C HOS3Q02959 697 aaKnown RBP3.19□□□□□ -1.9
SEC7YDR170C TRS33Q99394 268 aa3.19□□□□□ -1.9
SEC7YDR170C SWR1Q05471 1514 aa3.19□□□□□ -1.9
SEC7YDR170C HSP104P31539 908 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C DLD1P32891 587 aa3.18□□□□□ -1.9
SEC7YDR170C SRC1Q03707 834 aa3.18□□□□□ -1.9
SEC7YDR170C RRB1Q04225 511 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C NBL1Q3E7Y6 73 aa3.18□□□□□ -1.9
SEC7YDR170C TSR2Q06672 205 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C PDR18P53756 1333 aa3.18□□□□□ -1.9
SEC7YDR170C SPT21P35209 758 aa3.18□□□□□ -1.9
SEC7YDR170C CEF1Q03654 590 aaPredicted RBP3.18□□□□□ -1.9
SEC7YDR170C GIR2Q03768 265 aaPredicted RBP3.18□□□□□ -1.9
SEC7YDR170C HCR1Q05775 265 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C GEA1P47102 1408 aaPredicted RBP3.18□□□□□ -1.9
SEC7YDR170C FYV8P46949 817 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C RLP24Q07915 199 aaKnown RBP3.18□□□□□ -1.9
SEC7YDR170C MCM2P29469 868 aa3.17□□□□□ -1.9
SEC7YDR170C LAM1P38851 1228 aa3.17□□□□□ -1.9
SEC7YDR170C MSH4P40965 878 aaPredicted RBP3.17□□□□□ -1.9
SEC7YDR170C MSB4Q12317 492 aa3.17□□□□□ -1.9
SEC7YDR170C CDC15P27636 974 aa3.17□□□□□ -1.9
SEC7YDR170C SWC3P31376 625 aa3.17□□□□□ -1.9
SEC7YDR170C RIX1P38883 763 aaPredicted RBP3.17□□□□□ -1.9
SEC7YDR170C SEC27P41811 889 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C MDM38Q08179 573 aa3.17□□□□□ -1.9
SEC7YDR170C PLP2Q12017 286 aa3.17□□□□□ -1.9
SEC7YDR170C HSP82P02829 709 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C SSE1P32589 693 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C LTV1P34078 463 aa3.17□□□□□ -1.9
SEC7YDR170C NAB3P38996 802 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
SEC7YDR170C VID28P40547 921 aa3.17□□□□□ -1.9
SEC7YDR170C ETT1Q08421 412 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C CTI6Q08923 506 aa3.17□□□□□ -1.9
SEC7YDR170C RTP1Q12751 981 aa3.17□□□□□ -1.9
SEC7YDR170C RRP14P36080 434 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C BPT1P14772 1559 aa3.17□□□□□ -1.9
SEC7YDR170C RPS24AP0CX31 135 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C RPS24BP0CX32 135 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C VMA4P22203 233 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C CDC60P26637 1090 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C SLA1P32790 1244 aa3.17□□□□□ -1.9
SEC7YDR170C RVS167P39743 482 aaKnown RBP3.17□□□□□ -1.9
SEC7YDR170C NDC80P40460 691 aa3.17□□□□□ -1.9
SEC7YDR170C PSR2Q07949 397 aa3.17□□□□□ -1.9
SEC7YDR170C RPL19AP0CX82 189 aaKnown RBP3.16□□□□□ -1.9
SEC7YDR170C RPL19BP0CX83 189 aaPredicted RBP3.16□□□□□ -1.9
SEC7YDR170C CSC1Q06538 782 aa3.16□□□□□ -1.9
SEC7YDR170C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9 RIP-Chip
SEC7YDR170C PRP3Q03338 469 aaPredicted RBP3.16□□□□□ -1.9
SEC7YDR170C HIM1Q06674 414 aa3.16□□□□□ -1.9
SEC7YDR170C RPP0P05317 312 aaKnown RBP3.16□□□□□ -1.9
SEC7YDR170C MIF2P35201 549 aa3.16□□□□□ -1.9
SEC7YDR170C BTN2P53286 410 aa3.16□□□□□ -1.9
SEC7YDR170C SAP190P36123 1033 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms