RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	TFB4	Q12004	338 aa		5.12	□□□□□ -1.59
RPS13	YDR064W	MAK21	Q12176	1025 aa	Known RBP	5.12	□□□□□ -1.59
RPS13	YDR064W	SAS10	Q12136	610 aa	Predicted RBP	5.11	□□□□□ -1.59
RPS13	YDR064W	ECM5	Q03214	1411 aa		5.11	□□□□□ -1.59
RPS13	YDR064W	RGR1	P19263	1082 aa		5.1	□□□□□ -1.59
RPS13	YDR064W	TY1A-DR4	O74302	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TOP1	P04786	769 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-H	P0C2I4	478 aa	Known RBP	5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-A	P0CX57	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-PR1	P0CX58	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-OR	P0CX59	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-PR2	P0CX60	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-DR5	P0CX65	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-ER2	P0CX66	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-GR3	P0CX67	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-LR1	P0CX68	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-MR2	P0CX69	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-JR2	P47099	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-DR1	Q03856	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-ML1	Q04706	440 aa	Known RBP	5.09	□□□□□ -1.59
RPS13	YDR064W	YPR109W	Q06104	294 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-BR	Q12217	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-NL2	Q12470	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	TY1A-GR2	Q12485	440 aa		5.09	□□□□□ -1.59
RPS13	YDR064W	CKB1	P43639	278 aa		5.08	□□□□□ -1.6
RPS13	YDR064W	SEC2	P17065	759 aa		5.07	□□□□□ -1.6
RPS13	YDR064W	DEF1	P35732	738 aa	Known RBP	5.07	□□□□□ -1.6
RPS13	YDR064W	PRT1	P06103	763 aa	Known RBP	5.06	□□□□□ -1.6
RPS13	YDR064W	IES2	P40154	320 aa		5.06	□□□□□ -1.6
RPS13	YDR064W	AMS1	P22855	1083 aa		5.05	□□□□□ -1.6
RPS13	YDR064W	ERF2	Q06551	359 aa		5.05	□□□□□ -1.6
RPS13	YDR064W	MAM3	Q12296	706 aa		5.05	□□□□□ -1.6
RPS13	YDR064W	REV3	P14284	1504 aa		5.04	□□□□□ -1.6
RPS13	YDR064W	GCD11	P32481	527 aa	Known RBP	5.04	□□□□□ -1.6
RPS13	YDR064W	DSF2	P38213	736 aa		5.04	□□□□□ -1.6
RPS13	YDR064W	SAS4	Q04003	481 aa		5.04	□□□□□ -1.6
RPS13	YDR064W	KEX2	P13134	814 aa		5.03	□□□□□ -1.6
RPS13	YDR064W	SNU71	P53207	620 aa	Known RBP	5.03	□□□□□ -1.6
RPS13	YDR064W	NPL4	P33755	580 aa		5.02	□□□□□ -1.61
RPS13	YDR064W	NUP42	P49686	430 aa	Known RBP	5.02	□□□□□ -1.61
RPS13	YDR064W	CWC22	P53333	577 aa	Known RBP	5.02	□□□□□ -1.61
RPS13	YDR064W	PSE1	P32337	1089 aa	Known RBP	5.01	□□□□□ -1.61
RPS13	YDR064W	CST6	P40535	587 aa		5.01	□□□□□ -1.61
RPS13	YDR064W	DIT2	P21595	489 aa		5	□□□□□ -1.61
RPS13	YDR064W	CLA4	P48562	842 aa		5	□□□□□ -1.61
RPS13	YDR064W	SPB4	P25808	606 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS13	YDR064W	FPR3	P38911	411 aa	Known RBP	4.99	□□□□□ -1.61
RPS13	YDR064W	RRN7	P40992	514 aa		4.99	□□□□□ -1.61
RPS13	YDR064W	PSH1	Q12161	406 aa		4.99	□□□□□ -1.61
RPS13	YDR064W	QCR6	P00127	147 aa		4.98	□□□□□ -1.61
RPS13	YDR064W	HSP82	P02829	709 aa	Known RBP	4.98	□□□□□ -1.61
RPS13	YDR064W	YEL077C	Q3E7X8	1277 aa		4.98	□□□□□ -1.61
RPS13	YDR064W	MDS3	P53094	1487 aa		4.98	□□□□□ -1.61
RPS13	YDR064W	MRF1	P30775	413 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS13	YDR064W	SPT16	P32558	1035 aa	Known RBP	4.96	□□□□□ -1.62
RPS13	YDR064W	AIR1	P40507	360 aa	Known RBP	4.96	□□□□□ -1.62
RPS13	YDR064W	TCB2	P48231	1178 aa		4.96	□□□□□ -1.62
RPS13	YDR064W	BUD4	P47136	1447 aa		4.96	□□□□□ -1.62
RPS13	YDR064W	ERG12	P07277	443 aa		4.95	□□□□□ -1.62
RPS13	YDR064W	PAC1	P39946	494 aa	Known RBP	4.95	□□□□□ -1.62
RPS13	YDR064W	FRK1	Q03002	865 aa	Predicted RBP	4.95	□□□□□ -1.62
RPS13	YDR064W	RLP24	Q07915	199 aa	Known RBP	4.95	□□□□□ -1.62
RPS13	YDR064W	LAM6	Q08001	693 aa		4.95	□□□□□ -1.62
RPS13	YDR064W	RLF2	Q12495	606 aa		4.95	□□□□□ -1.62
RPS13	YDR064W	TRK1	P12685	1235 aa		4.94	□□□□□ -1.62
RPS13	YDR064W	RIX1	P38883	763 aa	Predicted RBP	4.94	□□□□□ -1.62
RPS13	YDR064W	NIS1	P53939	407 aa		4.94	□□□□□ -1.62
RPS13	YDR064W	AGE1	Q04412	482 aa		4.94	□□□□□ -1.62
RPS13	YDR064W	PLP2	Q12017	286 aa		4.94	□□□□□ -1.62
RPS13	YDR064W	SPT6	P23615	1451 aa	Known RBP	4.94	□□□□□ -1.62
RPS13	YDR064W	NUG1	P40010	520 aa	Known RBP	4.93	□□□□□ -1.62
RPS13	YDR064W	BDP1	P46678	594 aa		4.93	□□□□□ -1.62
RPS13	YDR064W	HSL1	P34244	1518 aa		4.92	□□□□□ -1.62
RPS13	YDR064W	RPS0A	P32905	252 aa	Known RBP	4.92	□□□□□ -1.62
RPS13	YDR064W	TEA1	P47988	759 aa		4.92	□□□□□ -1.62
RPS13	YDR064W	TUB4	P53378	473 aa		4.92	□□□□□ -1.62
RPS13	YDR064W	ORC1	P54784	914 aa	Predicted RBP	4.92	□□□□□ -1.62
RPS13	YDR064W	BPT1	P14772	1559 aa		4.91	□□□□□ -1.62
RPS13	YDR064W	THO2	P53552	1597 aa	Known RBP	4.91	□□□□□ -1.62
RPS13	YDR064W	SPT2	P06843	333 aa	Predicted RBP	4.91	□□□□□ -1.62
RPS13	YDR064W	CLB5	P30283	435 aa		4.91	□□□□□ -1.62
RPS13	YDR064W	MDG1	P53885	366 aa		4.91	□□□□□ -1.62
RPS13	YDR064W	SIT4	P20604	311 aa		4.9	□□□□□ -1.63
RPS13	YDR064W	FUN12	P39730	1002 aa	Known RBP	4.9	□□□□□ -1.63
RPS13	YDR064W	RPN1	P38764	993 aa	Known RBP	4.89	□□□□□ -1.63
RPS13	YDR064W	YNL115C	P53925	644 aa		4.89	□□□□□ -1.63
RPS13	YDR064W	MOD5	P07884	428 aa		4.88	□□□□□ -1.63
RPS13	YDR064W	SCJ1	P25303	377 aa		4.88	□□□□□ -1.63
RPS13	YDR064W	ENP1	P38333	483 aa	Known RBP	4.88	□□□□□ -1.63
RPS13	YDR064W	FPK1	P53739	893 aa		4.88	□□□□□ -1.63
RPS13	YDR064W	RNA1	P11745	407 aa	Known RBP	4.87	□□□□□ -1.63
RPS13	YDR064W	PAT1	P25644	796 aa	Known RBP	4.87	□□□□□ -1.63
RPS13	YDR064W	RTF1	P53064	558 aa		4.87	□□□□□ -1.63
RPS13	YDR064W	ENV11	P53246	860 aa		4.87	□□□□□ -1.63
RPS13	YDR064W	PUS5	Q06244	254 aa		4.87	□□□□□ -1.63
RPS13	YDR064W	HIF1	Q12373	385 aa		4.87	□□□□□ -1.63
RPS13	YDR064W	TOA1	P32773	286 aa		4.86	□□□□□ -1.63
RPS13	YDR064W	GLC3	P32775	704 aa		4.86	□□□□□ -1.63
RPS13	YDR064W	SLY41	P22215	453 aa		4.85	□□□□□ -1.63
RPS13	YDR064W	SUB1	P54000	292 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms