RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	TRM3	Q07527	1436 aa		4.92	□□□□□ -1.62
VMA1	YDL185W	SUI2	P20459	304 aa	Known RBP	4.92	□□□□□ -1.62
VMA1	YDL185W	RPS0B	P46654	252 aa	Known RBP	4.92	□□□□□ -1.62
VMA1	YDL185W	FAP1	P53971	965 aa		4.92	□□□□□ -1.62
VMA1	YDL185W	ARL1	P38116	183 aa	Known RBP	4.92	□□□□□ -1.62
VMA1	YDL185W	YRB30	P53107	440 aa	Predicted RBP	4.92	□□□□□ -1.62
VMA1	YDL185W	TEA1	P47988	759 aa		4.91	□□□□□ -1.62
VMA1	YDL185W	RAD26	P40352	1085 aa		4.9	□□□□□ -1.63
VMA1	YDL185W	YDL144C	Q07589	356 aa		4.9	□□□□□ -1.63
VMA1	YDL185W	SPO14	P36126	1683 aa		4.9	□□□□□ -1.63
VMA1	YDL185W	DOP1	Q03921	1698 aa		4.9	□□□□□ -1.63
VMA1	YDL185W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
VMA1	YDL185W	LSP1	Q12230	341 aa	Known RBP	4.89	□□□□□ -1.63
VMA1	YDL185W	NUG1	P40010	520 aa	Known RBP	4.89	□□□□□ -1.63
VMA1	YDL185W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
VMA1	YDL185W	YOR093C	Q12275	1648 aa		4.89	□□□□□ -1.63
VMA1	YDL185W	IOC4	Q04213	475 aa		4.88	□□□□□ -1.63
VMA1	YDL185W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
VMA1	YDL185W	RPO21	P04050	1733 aa	Known RBP	4.87	□□□□□ -1.63
VMA1	YDL185W	LTE1	P07866	1435 aa		4.87	□□□□□ -1.63
VMA1	YDL185W	BUD3	P25558	1636 aa		4.87	□□□□□ -1.63
VMA1	YDL185W	YIL055C	P40523	627 aa	Known RBP	4.87	□□□□□ -1.63
VMA1	YDL185W	SNF2	P22082	1703 aa		4.87	□□□□□ -1.63
VMA1	YDL185W	HAP1	P0CE41	1502 aa		4.86	□□□□□ -1.63
VMA1	YDL185W	MLP1	Q02455	1875 aa	Known RBP	4.86	□□□□□ -1.63
VMA1	YDL185W	TRK1	P12685	1235 aa		4.85	□□□□□ -1.63
VMA1	YDL185W	CKB1	P43639	278 aa		4.85	□□□□□ -1.63
VMA1	YDL185W	BUD21	Q08492	214 aa	Predicted RBP	4.85	□□□□□ -1.63
VMA1	YDL185W	RIM101	P33400	625 aa		4.85	□□□□□ -1.63
VMA1	YDL185W	TAF5	P38129	798 aa		4.85	□□□□□ -1.63
VMA1	YDL185W	SMC3	P47037	1230 aa		4.85	□□□□□ -1.63
VMA1	YDL185W	RPN1	P38764	993 aa	Known RBP	4.84	□□□□□ -1.63
VMA1	YDL185W	MPP10	P47083	593 aa	Known RBP	4.84	□□□□□ -1.63
VMA1	YDL185W	YEF3	P16521	1044 aa	Known RBP	4.84	□□□□□ -1.64
VMA1	YDL185W	HAP5	Q02516	242 aa		4.84	□□□□□ -1.64
VMA1	YDL185W	RTC1	Q08281	1341 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	RTG3	P38165	486 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	FPR4	Q06205	392 aa	Predicted RBP	4.83	□□□□□ -1.64
VMA1	YDL185W	NUP192	P47054	1683 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	POL32	P47110	350 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	RSC1	P53236	928 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	LCD1	Q04377	747 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	NTE1	Q04958	1679 aa		4.83	□□□□□ -1.64
VMA1	YDL185W	SPC110	P32380	944 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	YIL092W	P40497	633 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	PIL1	P53252	339 aa	Known RBP	4.82	□□□□□ -1.64
VMA1	YDL185W	PDR11	P40550	1411 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	RAV1	P47104	1357 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	CDC25	P04821	1589 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	YSP2	Q06681	1438 aa		4.82	□□□□□ -1.64
VMA1	YDL185W	RNA1	P11745	407 aa	Known RBP	4.82	□□□□□ -1.64
VMA1	YDL185W	RAD2	P07276	1031 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	MCM2	P29469	868 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	CLB5	P30283	435 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	RKM3	P38222	552 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	TPM2	P40414	161 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	DAL5	P15365	543 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	SAP155	P43612	1002 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	DRS2	P39524	1355 aa		4.81	□□□□□ -1.64
VMA1	YDL185W	CHC1	P22137	1653 aa	Known RBP	4.81	□□□□□ -1.64
VMA1	YDL185W	RRP46	P53256	223 aa	Predicted RBP	4.8	□□□□□ -1.64
VMA1	YDL185W	MET5	P47169	1442 aa		4.8	□□□□□ -1.64
VMA1	YDL185W	CIN4	P39110	191 aa		4.8	□□□□□ -1.64
VMA1	YDL185W	ROM2	P51862	1356 aa	Known RBP	4.8	□□□□□ -1.64
VMA1	YDL185W	SWE1	P32944	819 aa		4.8	□□□□□ -1.64
VMA1	YDL185W	RIX1	P38883	763 aa	Predicted RBP	4.8	□□□□□ -1.64
VMA1	YDL185W	RRT14	P40470	206 aa		4.8	□□□□□ -1.64
VMA1	YDL185W	DMA2	P53924	522 aa		4.8	□□□□□ -1.64
VMA1	YDL185W	PRI1	P10363	409 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	SRS2	P12954	1174 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	MDG1	P53885	366 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	IML1	P47170	1584 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	OXP1	P28273	1286 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	MED8	P38304	223 aa		4.79	□□□□□ -1.64
VMA1	YDL185W	HOS3	Q02959	697 aa	Known RBP	4.79	□□□□□ -1.64
VMA1	YDL185W	BMS1	Q08965	1183 aa	Known RBP	4.79	□□□□□ -1.64
VMA1	YDL185W	CIR1	P42940	261 aa		4.78	□□□□□ -1.64
VMA1	YDL185W	KRE33	P53914	1056 aa	Known RBP	4.78	□□□□□ -1.64
VMA1	YDL185W	LTV1	P34078	463 aa		4.78	□□□□□ -1.64
VMA1	YDL185W	NOP14	Q99207	810 aa	Known RBP	4.78	□□□□□ -1.64
VMA1	YDL185W	ESL2	P36168	1195 aa		4.78	□□□□□ -1.64
VMA1	YDL185W	SIC1	P38634	284 aa		4.78	□□□□□ -1.64
VMA1	YDL185W	ECM1	P39715	212 aa		4.78	□□□□□ -1.64
VMA1	YDL185W	TSR3	Q12094	313 aa	Known RBP	4.77	□□□□□ -1.65
VMA1	YDL185W	TCD1	P38756	429 aa		4.77	□□□□□ -1.65
VMA1	YDL185W	FKH1	P40466	484 aa		4.76	□□□□□ -1.65
VMA1	YDL185W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
VMA1	YDL185W	RPA190	P10964	1664 aa	Known RBP	4.76	□□□□□ -1.65
VMA1	YDL185W	CHZ1	P40019	153 aa	Predicted RBP	4.76	□□□□□ -1.65
VMA1	YDL185W	ESC2	Q06340	456 aa		4.76	□□□□□ -1.65
VMA1	YDL185W	NMD2	P38798	1089 aa	Known RBP	4.76	□□□□□ -1.65
VMA1	YDL185W	HEF3	P53978	1044 aa	Known RBP	4.76	□□□□□ -1.65
VMA1	YDL185W	VPS60	Q03390	229 aa		4.76	□□□□□ -1.65
VMA1	YDL185W	PUF6	Q04373	656 aa	Known RBP	4.76	□□□□□ -1.65
VMA1	YDL185W	THI22	Q06490	572 aa		4.76	□□□□□ -1.65
VMA1	YDL185W	VMR1	P38735	1592 aa		4.75	□□□□□ -1.65
VMA1	YDL185W	DEF1	P35732	738 aa	Known RBP	4.75	□□□□□ -1.65
VMA1	YDL185W	BDH2	P39713	417 aa		4.75	□□□□□ -1.65
VMA1	YDL185W	DSN1	P40568	576 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms