RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W TFB4Q12004 338 aa7.48□□□□□ -1.21
KIN28YDL108W GUA1P38625 525 aaKnown RBP7.47□□□□□ -1.21
KIN28YDL108W YPR109WQ06104 294 aa7.46□□□□□ -1.22
KIN28YDL108W TUM1Q08686 304 aaKnown RBP7.44□□□□□ -1.22
KIN28YDL108W CSN12P47130 423 aa7.43□□□□□ -1.22
KIN28YDL108W YMR196WQ04336 1088 aa7.43□□□□□ -1.22
KIN28YDL108W YEL077CQ3E7X8 1277 aa7.43□□□□□ -1.22
KIN28YDL108W SSA2P10592 639 aaKnown RBP7.42□□□□□ -1.22
KIN28YDL108W HPC2Q01448 625 aa7.41□□□□□ -1.22
KIN28YDL108W BUD20Q08004 166 aaPredicted RBP7.41□□□□□ -1.22
KIN28YDL108W NIS1P53939 407 aa7.4□□□□□ -1.22
KIN28YDL108W YRR1Q12172 810 aa7.4□□□□□ -1.22
KIN28YDL108W BRL1P38770 471 aa7.38□□□□□ -1.23
KIN28YDL108W YPL062WQ02781 134 aa7.38□□□□□ -1.23
KIN28YDL108W FPK1P53739 893 aa7.37□□□□□ -1.23
KIN28YDL108W TFB3Q03290 321 aa7.37□□□□□ -1.23
KIN28YDL108W TYW1Q08960 810 aaKnown RBP7.36□□□□□ -1.23
KIN28YDL108W PRT1P06103 763 aaKnown RBP7.35□□□□□ -1.23
KIN28YDL108W MRF1P30775 413 aaPredicted RBP7.35□□□□□ -1.23
KIN28YDL108W GLN1P32288 370 aaKnown RBP7.35□□□□□ -1.23
KIN28YDL108W STR2P47164 639 aa7.34□□□□□ -1.23
KIN28YDL108W HST2P53686 357 aa7.34□□□□□ -1.23
KIN28YDL108W MMP1Q12372 583 aa7.33□□□□□ -1.24
KIN28YDL108W KTR1P27810 393 aaKnown RBP7.32□□□□□ -1.24
KIN28YDL108W NUD1P32336 851 aa7.32□□□□□ -1.24
KIN28YDL108W AIR1P40507 360 aaKnown RBP7.32□□□□□ -1.24
KIN28YDL108W ISM1P48526 1002 aa7.32□□□□□ -1.24
KIN28YDL108W CLA4P48562 842 aa7.31□□□□□ -1.24
KIN28YDL108W SIT4P20604 311 aa7.3□□□□□ -1.24
KIN28YDL108W NPL4P33755 580 aa7.3□□□□□ -1.24
KIN28YDL108W PKH3Q03306 898 aaPredicted RBP7.3□□□□□ -1.24
KIN28YDL108W ESS1P22696 170 aa7.29□□□□□ -1.24
KIN28YDL108W SCJ1P25303 377 aa7.29□□□□□ -1.24
KIN28YDL108W CST6P40535 587 aa7.29□□□□□ -1.24
KIN28YDL108W BRE2P43132 505 aa7.29□□□□□ -1.24
KIN28YDL108W RLF2Q12495 606 aa7.29□□□□□ -1.24
KIN28YDL108W RTF1P53064 558 aa7.28□□□□□ -1.24
KIN28YDL108W ERG12P07277 443 aa7.27□□□□□ -1.25
KIN28YDL108W SLY41P22215 453 aa7.27□□□□□ -1.25
KIN28YDL108W PKC1P24583 1151 aa7.27□□□□□ -1.25
KIN28YDL108W KEX2P13134 814 aa7.26□□□□□ -1.25
KIN28YDL108W YNL115CP53925 644 aa7.26□□□□□ -1.25
KIN28YDL108W GAR1P28007 205 aaKnown RBP7.25□□□□□ -1.25
KIN28YDL108W ARG8P18544 423 aa7.24□□□□□ -1.25
KIN28YDL108W YJU3P28321 313 aa7.24□□□□□ -1.25
KIN28YDL108W RAD59Q12223 238 aa7.24□□□□□ -1.25
KIN28YDL108W YBL036CP38197 257 aa7.23□□□□□ -1.25
KIN28YDL108W TY1A-DR4O74302 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-HP0C2I4 478 aaKnown RBP7.22□□□□□ -1.25
KIN28YDL108W TY1A-AP0CX57 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-PR1P0CX58 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-ORP0CX59 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-PR2P0CX60 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-DR5P0CX65 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-ER2P0CX66 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-GR3P0CX67 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-LR1P0CX68 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-MR2P0CX69 440 aa7.22□□□□□ -1.25
KIN28YDL108W YJL007CP47080 104 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-JR2P47099 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-DR1Q03856 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-ML1Q04706 440 aaKnown RBP7.22□□□□□ -1.25
KIN28YDL108W LAM6Q08001 693 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-BRQ12217 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-NL2Q12470 440 aa7.22□□□□□ -1.25
KIN28YDL108W TY1A-GR2Q12485 440 aa7.22□□□□□ -1.25
KIN28YDL108W GCD11P32481 527 aaKnown RBP7.21□□□□□ -1.26
KIN28YDL108W ERF2Q06551 359 aa7.21□□□□□ -1.26
KIN28YDL108W SEC2P17065 759 aa7.2□□□□□ -1.26
KIN28YDL108W GCR2Q01722 534 aa7.2□□□□□ -1.26
KIN28YDL108W TBF1Q02457 562 aa7.2□□□□□ -1.26
KIN28YDL108W TRM1P15565 570 aaKnown RBP7.18□□□□□ -1.26
KIN28YDL108W GBP2P25555 427 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
KIN28YDL108W BIM1P40013 344 aa7.17□□□□□ -1.26
KIN28YDL108W RPL34BP40525 121 aaKnown RBP7.17□□□□□ -1.26
KIN28YDL108W PUS6P53294 404 aa7.17□□□□□ -1.26
KIN28YDL108W FRK1Q03002 865 aaPredicted RBP7.17□□□□□ -1.26
KIN28YDL108W SPT16P32558 1035 aaKnown RBP7.16□□□□□ -1.26
KIN28YDL108W CSE4P36012 229 aa7.16□□□□□ -1.26
KIN28YDL108W BIO2P32451 375 aa7.15□□□□□ -1.26
KIN28YDL108W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
KIN28YDL108W ATG32P40458 529 aa7.14□□□□□ -1.27
KIN28YDL108W CDC4P07834 779 aa7.13□□□□□ -1.27
KIN28YDL108W RSC30P38781 883 aa7.13□□□□□ -1.27
KIN28YDL108W BDP1P46678 594 aa7.13□□□□□ -1.27
KIN28YDL108W TUB4P53378 473 aa7.13□□□□□ -1.27
KIN28YDL108W PAT1P25644 796 aaKnown RBP7.12□□□□□ -1.27
KIN28YDL108W YDL206WQ12424 762 aa7.12□□□□□ -1.27
KIN28YDL108W MAK16P10962 306 aaPredicted RBP7.11□□□□□ -1.27
KIN28YDL108W MET22P32179 357 aa7.11□□□□□ -1.27
KIN28YDL108W RRN7P40992 514 aa7.11□□□□□ -1.27
KIN28YDL108W AGE1Q04412 482 aa7.11□□□□□ -1.27
KIN28YDL108W TIF1P10081 395 aaKnown RBP7.1□□□□□ -1.27
KIN28YDL108W SPT5P27692 1063 aaKnown RBP7.1□□□□□ -1.27
KIN28YDL108W YNL108CP53929 270 aa7.1□□□□□ -1.27
KIN28YDL108W PAC1P39946 494 aaKnown RBP7.07□□□□□ -1.28
KIN28YDL108W RPA14P50106 137 aa7.07□□□□□ -1.28
KIN28YDL108W RTG2P32608 588 aaKnown RBP7.06□□□□□ -1.28
KIN28YDL108W ALR1Q08269 859 aa7.06□□□□□ -1.28
KIN28YDL108W ENV9Q08651 330 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms