RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C GLN1P32288 370 aaKnown RBP5.96□□□□□ -1.46
PRP11YDL043C YJL007CP47080 104 aa5.96□□□□□ -1.46
PRP11YDL043C SAS4Q04003 481 aa5.96□□□□□ -1.46
PRP11YDL043C KTR1P27810 393 aaKnown RBP5.95□□□□□ -1.46
PRP11YDL043C RGR1P19263 1082 aa5.94□□□□□ -1.46
PRP11YDL043C SUB2Q07478 446 aaKnown RBP5.94□□□□□ -1.46
PRP11YDL043C SSA1P10591 642 aaKnown RBP5.93□□□□□ -1.46
PRP11YDL043C CLB5P30283 435 aa5.93□□□□□ -1.46
PRP11YDL043C ATG32P40458 529 aa5.93□□□□□ -1.46
PRP11YDL043C YEL077CQ3E7X8 1277 aa5.93□□□□□ -1.46
PRP11YDL043C PDR1P12383 1068 aa5.92□□□□□ -1.46
PRP11YDL043C GEF1P37020 779 aa5.92□□□□□ -1.46
PRP11YDL043C YML020WQ03722 664 aa5.91□□□□□ -1.46
PRP11YDL043C TYW1Q08960 810 aaKnown RBP5.91□□□□□ -1.46
PRP11YDL043C GAR1P28007 205 aaKnown RBP5.9□□□□□ -1.46
PRP11YDL043C MVP1P40959 511 aaKnown RBP5.9□□□□□ -1.46
PRP11YDL043C GAP1P19145 602 aaPredicted RBP5.89□□□□□ -1.47
PRP11YDL043C YBL036CP38197 257 aa5.89□□□□□ -1.47
PRP11YDL043C RPL34BP40525 121 aaKnown RBP5.89□□□□□ -1.47
PRP11YDL043C CDC73Q06697 393 aa5.89□□□□□ -1.47
PRP11YDL043C NOP8Q08287 484 aaPredicted RBP5.89□□□□□ -1.47
PRP11YDL043C TIF1P10081 395 aaKnown RBP5.88□□□□□ -1.47
PRP11YDL043C SSA4P22202 642 aaKnown RBP5.88□□□□□ -1.47
PRP11YDL043C SLX8P40072 274 aa5.88□□□□□ -1.47
PRP11YDL043C BRE2P43132 505 aa5.88□□□□□ -1.47
PRP11YDL043C HST2P53686 357 aa5.88□□□□□ -1.47
PRP11YDL043C GBP2P25555 427 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PRP11YDL043C FPK1P53739 893 aa5.87□□□□□ -1.47
PRP11YDL043C NIS1P53939 407 aa5.87□□□□□ -1.47
PRP11YDL043C CSC1Q06538 782 aa5.87□□□□□ -1.47
PRP11YDL043C RPP1BP10622 106 aaKnown RBP5.86□□□□□ -1.47
PRP11YDL043C CSE4P36012 229 aa5.86□□□□□ -1.47
PRP11YDL043C YMR196WQ04336 1088 aa5.86□□□□□ -1.47
PRP11YDL043C YPR109WQ06104 294 aa5.86□□□□□ -1.47
PRP11YDL043C MMP1Q12372 583 aa5.86□□□□□ -1.47
PRP11YDL043C ERG12P07277 443 aa5.85□□□□□ -1.47
PRP11YDL043C MRF1P30775 413 aaPredicted RBP5.85□□□□□ -1.47
PRP11YDL043C BIO2P32451 375 aa5.85□□□□□ -1.47
PRP11YDL043C GCR2Q01722 534 aa5.84□□□□□ -1.47
PRP11YDL043C PKH3Q03306 898 aaPredicted RBP5.84□□□□□ -1.47
PRP11YDL043C RAD59Q12223 238 aa5.84□□□□□ -1.47
PRP11YDL043C SIT4P20604 311 aa5.83□□□□□ -1.48
PRP11YDL043C ESS1P22696 170 aa5.83□□□□□ -1.48
PRP11YDL043C TTI1P36097 1038 aa5.83□□□□□ -1.48
PRP11YDL043C YPR204WQ08995 1032 aa5.83□□□□□ -1.48
PRP11YDL043C TFB4Q12004 338 aa5.83□□□□□ -1.48
PRP11YDL043C SCJ1P25303 377 aa5.82□□□□□ -1.48
PRP11YDL043C RTG2P32608 588 aaKnown RBP5.82□□□□□ -1.48
PRP11YDL043C AIR1P40507 360 aaKnown RBP5.82□□□□□ -1.48
PRP11YDL043C CPS1P27614 576 aa5.81□□□□□ -1.48
PRP11YDL043C YNL108CP53929 270 aa5.81□□□□□ -1.48
PRP11YDL043C YJU3P28321 313 aa5.8□□□□□ -1.48
PRP11YDL043C SUP45P12385 437 aaKnown RBP5.79□□□□□ -1.48
PRP11YDL043C ARG8P18544 423 aa5.78□□□□□ -1.48
PRP11YDL043C PEX21P50091 288 aa5.78□□□□□ -1.48
PRP11YDL043C BUD20Q08004 166 aaPredicted RBP5.78□□□□□ -1.48
PRP11YDL043C SPT5P27692 1063 aaKnown RBP5.77□□□□□ -1.49
PRP11YDL043C CLA4P48562 842 aa5.77□□□□□ -1.49
PRP11YDL043C RPL34AP87262 121 aaPredicted RBP5.77□□□□□ -1.49
PRP11YDL043C NOB1Q08444 459 aaKnown RBP5.77□□□□□ -1.49
PRP11YDL043C PRT1P06103 763 aaKnown RBP5.76□□□□□ -1.49
PRP11YDL043C RSC30P38781 883 aa5.76□□□□□ -1.49
PRP11YDL043C TUM1Q08686 304 aaKnown RBP5.76□□□□□ -1.49
PRP11YDL043C CDC3P32457 520 aaKnown RBP5.75□□□□□ -1.49
PRP11YDL043C SIS2P36024 562 aa5.75□□□□□ -1.49
PRP11YDL043C CST6P40535 587 aa5.75□□□□□ -1.49
PRP11YDL043C ENO1P00924 437 aaKnown RBP5.74□□□□□ -1.49
PRP11YDL043C ENO2P00925 437 aaKnown RBP5.74□□□□□ -1.49
PRP11YDL043C MAK16P10962 306 aaPredicted RBP5.74□□□□□ -1.49
PRP11YDL043C YDJ1P25491 409 aaKnown RBP5.74□□□□□ -1.49
PRP11YDL043C MRX10Q05648 414 aa5.74□□□□□ -1.49
PRP11YDL043C LAM6Q08001 693 aa5.74□□□□□ -1.49
PRP11YDL043C SLY41P22215 453 aa5.73□□□□□ -1.49
PRP11YDL043C PUP1P25043 261 aa5.73□□□□□ -1.49
PRP11YDL043C MET22P32179 357 aa5.73□□□□□ -1.49
PRP11YDL043C SLD2P34252 453 aa5.73□□□□□ -1.49
PRP11YDL043C RTF1P53064 558 aa5.73□□□□□ -1.49
PRP11YDL043C YNL115CP53925 644 aa5.72□□□□□ -1.49
PRP11YDL043C RIM21P48565 533 aa5.71□□□□□ -1.5
PRP11YDL043C YML083CQ04526 418 aa5.71□□□□□ -1.5
PRP11YDL043C YRR1Q12172 810 aa5.71□□□□□ -1.5
PRP11YDL043C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
PRP11YDL043C STR2P47164 639 aa5.7□□□□□ -1.5
PRP11YDL043C YPP1P46951 817 aa5.69□□□□□ -1.5
PRP11YDL043C MRX12P47084 519 aa5.69□□□□□ -1.5
PRP11YDL043C ENV9Q08651 330 aa5.69□□□□□ -1.5
PRP11YDL043C TRM1P15565 570 aaKnown RBP5.68□□□□□ -1.5
PRP11YDL043C TGL4P36165 910 aa5.68□□□□□ -1.5
PRP11YDL043C SSF1P38789 453 aaPredicted RBP5.68□□□□□ -1.5
PRP11YDL043C ISM1P48526 1002 aa5.68□□□□□ -1.5
PRP11YDL043C PUS6P53294 404 aa5.68□□□□□ -1.5
PRP11YDL043C NAF1P53919 492 aaKnown RBP5.68□□□□□ -1.5
PRP11YDL043C CDC4P07834 779 aa5.67□□□□□ -1.5
PRP11YDL043C PEP12P32854 288 aa5.67□□□□□ -1.5
PRP11YDL043C KEX2P13134 814 aa5.65□□□□□ -1.5
PRP11YDL043C HAT1Q12341 374 aa5.65□□□□□ -1.5
PRP11YDL043C RDS2P19541 446 aaKnown RBP5.64□□□□□ -1.51
PRP11YDL043C NUD1P32336 851 aa5.64□□□□□ -1.51
PRP11YDL043C ERF2Q06551 359 aa5.64□□□□□ -1.51
PRP11YDL043C MCM16Q12262 181 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms