RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeastyeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWH43YCR017C NAP1P25293 417 aaKnown RBP5.68□□□□□ -1.5
CWH43YCR017C THI12P42883 340 aa5.66□□□□□ -1.5
CWH43YCR017C THI5P43534 340 aa5.66□□□□□ -1.5
CWH43YCR017C THI11P47183 340 aa5.66□□□□□ -1.5
CWH43YCR017C THI13Q07748 340 aa5.66□□□□□ -1.5
CWH43YCR017C MRX12P47084 519 aa5.65□□□□□ -1.5
CWH43YCR017C TFC8Q12308 588 aa5.65□□□□□ -1.5
CWH43YCR017C HOP09932 586 aa5.65□□□□□ -1.51
CWH43YCR017C PTP3P40048 928 aa5.64□□□□□ -1.51
CWH43YCR017C YNR029CP53729 429 aaKnown RBP5.64□□□□□ -1.51
CWH43YCR017C NOP7P53261 605 aaKnown RBP5.63□□□□□ -1.51
CWH43YCR017C TY4B-HP0C2J7 1802 aa5.63□□□□□ -1.51
CWH43YCR017C TY4B-JP47024 1803 aa5.63□□□□□ -1.51
CWH43YCR017C ALD4P46367 519 aaKnown RBP5.62□□□□□ -1.51
CWH43YCR017C PSK1P31374 1356 aa5.62□□□□□ -1.51
CWH43YCR017C ESL2P36168 1195 aa5.61□□□□□ -1.51
CWH43YCR017C KRE5P22023 1365 aa5.61□□□□□ -1.51
CWH43YCR017C UBP10P53874 792 aaPredicted RBP5.59□□□□□ -1.51
CWH43YCR017C DCD1P06773 312 aa5.58□□□□□ -1.52
CWH43YCR017C RIA1P53893 1110 aa5.58□□□□□ -1.52
CWH43YCR017C ADE6P38972 1358 aaKnown RBP5.57□□□□□ -1.52
CWH43YCR017C URB1P34241 1764 aaKnown RBP5.56□□□□□ -1.52
CWH43YCR017C RAD9P14737 1309 aa5.56□□□□□ -1.52
CWH43YCR017C FKS3Q04952 1785 aa5.55□□□□□ -1.52
CWH43YCR017C SNF2P22082 1703 aa5.54□□□□□ -1.52
CWH43YCR017C YIL055CP40523 627 aaKnown RBP5.53□□□□□ -1.52
CWH43YCR017C MAP2P38174 421 aaKnown RBP5.53□□□□□ -1.52
CWH43YCR017C YLR419WQ06698 1435 aaKnown RBP5.52□□□□□ -1.53
CWH43YCR017C PRP43P53131 767 aaKnown RBP5.52□□□□□ -1.53
CWH43YCR017C OXP1P28273 1286 aa5.52□□□□□ -1.53
CWH43YCR017C APC1P53886 1748 aa5.51□□□□□ -1.53
CWH43YCR017C MLP1Q02455 1875 aaKnown RBP5.51□□□□□ -1.53
CWH43YCR017C ROM2P51862 1356 aaKnown RBP5.51□□□□□ -1.53
CWH43YCR017C CPS1P27614 576 aa5.5□□□□□ -1.53
CWH43YCR017C CAB1Q04430 367 aa5.5□□□□□ -1.53
CWH43YCR017C YMR074CQ04773 145 aa5.49□□□□□ -1.53
CWH43YCR017C RSF2P46974 1380 aa5.48□□□□□ -1.53
CWH43YCR017C SCY1P53009 804 aa5.48□□□□□ -1.53
CWH43YCR017C YRF1-3P0CX14 1859 aa5.47□□□□□ -1.53
CWH43YCR017C YRF1-7P0CX15 1859 aa5.47□□□□□ -1.53
CWH43YCR017C YRF1-6P53819 1859 aa5.47□□□□□ -1.53
CWH43YCR017C GLN1P32288 370 aaKnown RBP5.47□□□□□ -1.53
CWH43YCR017C BCH2P36122 765 aa5.46□□□□□ -1.53
CWH43YCR017C YEF3P16521 1044 aaKnown RBP5.46□□□□□ -1.54
CWH43YCR017C IMH1Q06704 911 aaKnown RBP5.46□□□□□ -1.54
CWH43YCR017C GTT3P39996 337 aa5.45□□□□□ -1.54
CWH43YCR017C MTR4P47047 1073 aaKnown RBP5.45□□□□□ -1.54
CWH43YCR017C YIL177CP40434 1758 aa5.45□□□□□ -1.54
CWH43YCR017C YJL225CP40889 1758 aa5.45□□□□□ -1.54
CWH43YCR017C TAF8Q03750 510 aa5.45□□□□□ -1.54
CWH43YCR017C SIR4P11978 1358 aa5.44□□□□□ -1.54
CWH43YCR017C RIM15P43565 1770 aa5.44□□□□□ -1.54
CWH43YCR017C SPE2P21182 396 aa5.43□□□□□ -1.54
CWH43YCR017C SLX5P32828 619 aaKnown RBP5.43□□□□□ -1.54
CWH43YCR017C ENT1Q12518 454 aa5.43□□□□□ -1.54
CWH43YCR017C UBP1P25037 809 aa5.42□□□□□ -1.54
CWH43YCR017C ENV9Q08651 330 aa5.42□□□□□ -1.54
CWH43YCR017C MHP1P43638 1398 aa5.42□□□□□ -1.54
CWH43YCR017C TAF5P38129 798 aa5.42□□□□□ -1.54
CWH43YCR017C RSM7P47150 247 aa5.41□□□□□ -1.54
CWH43YCR017C SPT7P35177 1332 aa5.4□□□□□ -1.55
CWH43YCR017C PRP5P21372 849 aaPredicted RBP5.4□□□□□ -1.55
CWH43YCR017C TIF4632P39936 914 aaKnown RBP5.4□□□□□ -1.55
CWH43YCR017C IOC4Q04213 475 aa5.4□□□□□ -1.55
CWH43YCR017C YML133CQ03099 1374 aa5.39□□□□□ -1.55
CWH43YCR017C YLL067CQ07888 1374 aa5.39□□□□□ -1.55
CWH43YCR017C YLL066CQ99208 1374 aa5.39□□□□□ -1.55
CWH43YCR017C LEU2P04173 364 aaPredicted RBP5.39□□□□□ -1.55
CWH43YCR017C RCM1P53972 490 aa5.39□□□□□ -1.55
CWH43YCR017C BBC1P47068 1157 aa5.38□□□□□ -1.55
CWH43YCR017C PPH3P32345 308 aa5.37□□□□□ -1.55
CWH43YCR017C TAP42Q04372 366 aa5.37□□□□□ -1.55
CWH43YCR017C TCB1Q12466 1186 aa5.37□□□□□ -1.55
CWH43YCR017C SEC3P33332 1336 aaKnown RBP5.37□□□□□ -1.55
CWH43YCR017C GRX4P32642 244 aa5.37□□□□□ -1.55
CWH43YCR017C EPS1P40557 701 aa5.37□□□□□ -1.55
CWH43YCR017C SLM3Q12093 417 aa5.37□□□□□ -1.55
CWH43YCR017C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
CWH43YCR017C RTF1P53064 558 aa5.37□□□□□ -1.55
CWH43YCR017C APP1P53933 587 aa5.37□□□□□ -1.55
CWH43YCR017C SSP1P38871 571 aa5.36□□□□□ -1.55
CWH43YCR017C IES2P40154 320 aa5.36□□□□□ -1.55
CWH43YCR017C KIP3P53086 805 aaKnown RBP5.36□□□□□ -1.55
CWH43YCR017C FKH1P40466 484 aa5.35□□□□□ -1.55
CWH43YCR017C MEC3Q02574 474 aa5.35□□□□□ -1.55
CWH43YCR017C UTP10P42945 1769 aaKnown RBP5.35□□□□□ -1.55
CWH43YCR017C BUD31P25337 157 aaPredicted RBP5.35□□□□□ -1.55
CWH43YCR017C PRP45P28004 379 aaPredicted RBP5.35□□□□□ -1.55
CWH43YCR017C PDI1P17967 522 aaKnown RBP5.34□□□□□ -1.55
CWH43YCR017C AI2P03876 854 aa5.34□□□□□ -1.56
CWH43YCR017C RPO41P13433 1351 aaKnown RBP5.33□□□□□ -1.56
CWH43YCR017C CTF4Q01454 927 aa5.33□□□□□ -1.56
CWH43YCR017C BDF1P35817 686 aa5.33□□□□□ -1.56
CWH43YCR017C PRP40P33203 583 aaKnown RBP5.32□□□□□ -1.56
CWH43YCR017C TGL3P40308 642 aa5.32□□□□□ -1.56
CWH43YCR017C YLR271WQ06152 274 aa5.32□□□□□ -1.56
CWH43YCR017C CSE4P36012 229 aa5.31□□□□□ -1.56
CWH43YCR017C YFR016CP43597 1233 aaKnown RBP5.31□□□□□ -1.56
CWH43YCR017C CHZ1P40019 153 aaPredicted RBP5.3□□□□□ -1.56
CWH43YCR017C MSB3P48566 633 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms