RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	REF2	P42073	533 aa	Predicted RBP	4.28	□□□□□ -1.72
SPB1	YCL054W	BRE2	P43132	505 aa		4.27	□□□□□ -1.73
SPB1	YCL054W	RGA2	Q06407	1009 aa		4.27	□□□□□ -1.73
SPB1	YCL054W	COX6	P00427	148 aa		4.25	□□□□□ -1.73
SPB1	YCL054W	NUD1	P32336	851 aa		4.25	□□□□□ -1.73
SPB1	YCL054W	GCD11	P32481	527 aa	Known RBP	4.25	□□□□□ -1.73
SPB1	YCL054W	TUM1	Q08686	304 aa	Known RBP	4.25	□□□□□ -1.73
SPB1	YCL054W	MAK21	Q12176	1025 aa	Known RBP	4.24	□□□□□ -1.73
SPB1	YCL054W	BUD20	Q08004	166 aa	Predicted RBP	4.24	□□□□□ -1.73
SPB1	YCL054W	GAR1	P28007	205 aa	Known RBP	4.23	□□□□□ -1.73
SPB1	YCL054W	YDR090C	Q03193	310 aa		4.23	□□□□□ -1.73
SPB1	YCL054W	HPC2	Q01448	625 aa		4.22	□□□□□ -1.73
SPB1	YCL054W	ISM1	P48526	1002 aa		4.21	□□□□□ -1.74
SPB1	YCL054W	TFB3	Q03290	321 aa		4.21	□□□□□ -1.74
SPB1	YCL054W	YPL062W	Q02781	134 aa		4.21	□□□□□ -1.74
SPB1	YCL054W	SDH2	P21801	266 aa		4.2	□□□□□ -1.74
SPB1	YCL054W	PKC1	P24583	1151 aa		4.2	□□□□□ -1.74
SPB1	YCL054W	STR2	P47164	639 aa		4.2	□□□□□ -1.74
SPB1	YCL054W	FRK1	Q03002	865 aa	Predicted RBP	4.2	□□□□□ -1.74
SPB1	YCL054W	CDC4	P07834	779 aa		4.19	□□□□□ -1.74
SPB1	YCL054W	NOP8	Q08287	484 aa	Predicted RBP	4.19	□□□□□ -1.74
SPB1	YCL054W	GLN1	P32288	370 aa	Known RBP	4.18	□□□□□ -1.74
SPB1	YCL054W	ATF2	P53296	535 aa		4.18	□□□□□ -1.74
SPB1	YCL054W	YML020W	Q03722	664 aa		4.17	□□□□□ -1.74
SPB1	YCL054W	TCB3	Q03640	1545 aa	Known RBP	4.17	□□□□□ -1.74
SPB1	YCL054W	RRN7	P40992	514 aa		4.17	□□□□□ -1.74
SPB1	YCL054W	HGH1	P48362	394 aa	Known RBP	4.17	□□□□□ -1.74
SPB1	YCL054W	SUB2	Q07478	446 aa	Known RBP	4.17	□□□□□ -1.74
SPB1	YCL054W	SGS1	P35187	1447 aa		4.17	□□□□□ -1.74
SPB1	YCL054W	SWR1	Q05471	1514 aa		4.16	□□□□□ -1.74
SPB1	YCL054W	GAP1	P19145	602 aa	Predicted RBP	4.16	□□□□□ -1.74
SPB1	YCL054W	ORC6	P38826	435 aa		4.16	□□□□□ -1.74
SPB1	YCL054W	CST6	P40535	587 aa		4.16	□□□□□ -1.74
SPB1	YCL054W	YPR109W	Q06104	294 aa		4.16	□□□□□ -1.74
SPB1	YCL054W	LAM6	Q08001	693 aa		4.16	□□□□□ -1.74
SPB1	YCL054W	KTR1	P27810	393 aa	Known RBP	4.15	□□□□□ -1.74
SPB1	YCL054W	HST3	P53687	447 aa		4.15	□□□□□ -1.75
SPB1	YCL054W	TY1B-DR4	Q07793	1604 aa		4.14	□□□□□ -1.75
SPB1	YCL054W	DNA2	P38859	1522 aa		4.14	□□□□□ -1.75
SPB1	YCL054W	BIM1	P40013	344 aa		4.14	□□□□□ -1.75
SPB1	YCL054W	HED1	Q03937	162 aa		4.14	□□□□□ -1.75
SPB1	YCL054W	CLB5	P30283	435 aa		4.13	□□□□□ -1.75
SPB1	YCL054W	ATG32	P40458	529 aa		4.13	□□□□□ -1.75
SPB1	YCL054W	AIR1	P40507	360 aa	Known RBP	4.13	□□□□□ -1.75
SPB1	YCL054W	MVP1	P40959	511 aa	Known RBP	4.13	□□□□□ -1.75
SPB1	YCL054W	SSA1	P10591	642 aa	Known RBP	4.12	□□□□□ -1.75
SPB1	YCL054W	GEF1	P37020	779 aa		4.12	□□□□□ -1.75
SPB1	YCL054W	PSE1	P32337	1089 aa	Known RBP	4.12	□□□□□ -1.75
SPB1	YCL054W	SLX8	P40072	274 aa		4.12	□□□□□ -1.75
SPB1	YCL054W	BDP1	P46678	594 aa		4.12	□□□□□ -1.75
SPB1	YCL054W	CSN12	P47130	423 aa		4.12	□□□□□ -1.75
SPB1	YCL054W	BRL1	P38770	471 aa		4.11	□□□□□ -1.75
SPB1	YCL054W	CLA4	P48562	842 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	ENV9	Q08651	330 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-DR4	O74302	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-H	P0C2I4	478 aa	Known RBP	4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-A	P0CX57	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-PR1	P0CX58	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-OR	P0CX59	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-PR2	P0CX60	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-DR5	P0CX65	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-ER2	P0CX66	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-GR3	P0CX67	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-LR1	P0CX68	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-MR2	P0CX69	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	YJL007C	P47080	104 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-JR2	P47099	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	ORC1	P54784	914 aa	Predicted RBP	4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-DR1	Q03856	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-ML1	Q04706	440 aa	Known RBP	4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-BR	Q12217	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-NL2	Q12470	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	TY1A-GR2	Q12485	440 aa		4.1	□□□□□ -1.75
SPB1	YCL054W	SSA2	P10592	639 aa	Known RBP	4.09	□□□□□ -1.76
SPB1	YCL054W	RGR1	P19263	1082 aa		4.09	□□□□□ -1.76
SPB1	YCL054W	YDR444W	Q04093	687 aa		4.09	□□□□□ -1.76
SPB1	YCL054W	KOG1	P38873	1557 aa		4.08	□□□□□ -1.76
SPB1	YCL054W	TIF1	P10081	395 aa	Known RBP	4.08	□□□□□ -1.76
SPB1	YCL054W	KEX2	P13134	814 aa		4.08	□□□□□ -1.76
SPB1	YCL054W	MET22	P32179	357 aa		4.08	□□□□□ -1.76
SPB1	YCL054W	TYW1	Q08960	810 aa	Known RBP	4.07	□□□□□ -1.76
SPB1	YCL054W	SEC2	P17065	759 aa		4.07	□□□□□ -1.76
SPB1	YCL054W	ASH1	P34233	588 aa		4.07	□□□□□ -1.76
SPB1	YCL054W	BIO2	P32451	375 aa		4.06	□□□□□ -1.76
SPB1	YCL054W	KXD1	P53158	218 aa		4.06	□□□□□ -1.76
SPB1	YCL054W	NOB1	Q08444	459 aa	Known RBP	4.06	□□□□□ -1.76
SPB1	YCL054W	RTF1	P53064	558 aa		4.05	□□□□□ -1.76
SPB1	YCL054W	AFT1	P22149	690 aa		4.05	□□□□□ -1.76
SPB1	YCL054W	MRX12	P47084	519 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	TEA1	P47988	759 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	CPS1	P27614	576 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	TTI1	P36097	1038 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	NIS1	P53939	407 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	HSL1	P34244	1518 aa		4.04	□□□□□ -1.76
SPB1	YCL054W	SSA4	P22202	642 aa	Known RBP	4.03	□□□□□ -1.76
SPB1	YCL054W	SRF1	Q12516	437 aa		4.03	□□□□□ -1.76
SPB1	YCL054W	SPT6	P23615	1451 aa	Known RBP	4.03	□□□□□ -1.76
SPB1	YCL054W	YLR346C	Q06139	101 aa		4.03	□□□□□ -1.76
SPB1	YCL054W	LCB5	Q06147	687 aa	Known RBP	4.03	□□□□□ -1.76
SPB1	YCL054W	YNL115C	P53925	644 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms