RNA–Protein interactions for RNA: RPM1

RPM1, Transcript of RNA component of mitochondrial RNase P, yeastyeast

Gene RPM1, Length 483 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPM1RPM1 HOP09932 586 aa14.27□□□□□ -0.13
RPM1RPM1 DCD1P06773 312 aa14.26□□□□□ -0.13
RPM1RPM1 TFC8Q12308 588 aa14.26□□□□□ -0.13
RPM1RPM1 PDR11P40550 1411 aa14.25□□□□□ -0.13
RPM1RPM1 IOC4Q04213 475 aa14.21□□□□□ -0.13
RPM1RPM1 SRB8P25648 1427 aa14.2□□□□□ -0.14
RPM1RPM1 ENT1Q12518 454 aa14.16□□□□□ -0.14
RPM1RPM1 PDR5P33302 1511 aaKnown RBP14.15□□□□□ -0.14
RPM1RPM1 TIF4632P39936 914 aaKnown RBP14.15□□□□□ -0.14
RPM1RPM1 UBP9P39967 754 aa14.13□□□□□ -0.15
RPM1RPM1 ENV9Q08651 330 aa14.13□□□□□ -0.15
RPM1RPM1 SCY1P53009 804 aa14.12□□□□□ -0.15
RPM1RPM1 SSA1P10591 642 aaKnown RBP14.11□□□□□ -0.15
RPM1RPM1 CFT1Q06632 1357 aaKnown RBP14.09□□□□□ -0.15
RPM1RPM1 TGL3P40308 642 aa14.09□□□□□ -0.15
RPM1RPM1 BUD21Q08492 214 aaPredicted RBP14.09□□□□□ -0.15
RPM1RPM1 IMH1Q06704 911 aaKnown RBP14.07□□□□□ -0.16
RPM1RPM1 KRE5P22023 1365 aa14.06□□□□□ -0.16
RPM1RPM1 YNR029CP53729 429 aaKnown RBP14.04□□□□□ -0.16
RPM1RPM1 RRD1P40454 393 aaKnown RBP14.03□□□□□ -0.16
RPM1RPM1 SLX5P32828 619 aaKnown RBP14.02□□□□□ -0.17
RPM1RPM1 RIA1P53893 1110 aa14.02□□□□□ -0.17
RPM1RPM1 SIS2P36024 562 aa14.01□□□□□ -0.17
RPM1RPM1 MRX12P47084 519 aa13.95□□□□□ -0.18
RPM1RPM1 YRF1-2P40105 1681 aa13.93□□□□□ -0.18
RPM1RPM1 YBL086CP38177 466 aa13.92□□□□□ -0.18
RPM1RPM1 UBP1P25037 809 aa13.89□□□□□ -0.19
RPM1RPM1 GCN2P15442 1659 aa13.84□□□□□ -0.19
RPM1RPM1 UGA2P38067 497 aa13.82□□□□□ -0.2
RPM1RPM1 GTT3P39996 337 aa13.82□□□□□ -0.2
RPM1RPM1 RRP5Q05022 1729 aaKnown RBP13.81□□□□□ -0.2
RPM1RPM1 TOP1P04786 769 aa13.8□□□□□ -0.2
RPM1RPM1 YFR016CP43597 1233 aaKnown RBP13.78□□□□□ -0.2
RPM1RPM1 TY3B-IQ7LHG5 1498 aaKnown RBP13.78□□□□□ -0.2
RPM1RPM1 MNN4P36044 1178 aa13.77□□□□□ -0.21
RPM1RPM1 RPN11P43588 306 aaKnown RBP13.77□□□□□ -0.21
RPM1RPM1 BCH2P36122 765 aa13.74□□□□□ -0.21
RPM1RPM1 LEU3P08638 886 aa13.72□□□□□ -0.21
RPM1RPM1 NUP192P47054 1683 aa13.69□□□□□ -0.22
RPM1RPM1 PRP45P28004 379 aaPredicted RBP13.68□□□□□ -0.22
RPM1RPM1 SNU71P53207 620 aaKnown RBP13.68□□□□□ -0.22
RPM1RPM1 SSA2P10592 639 aaKnown RBP13.67□□□□□ -0.22
RPM1RPM1 RPS0BP46654 252 aaKnown RBP13.67□□□□□ -0.22
RPM1RPM1 LYS4P49367 693 aaPredicted RBP13.67□□□□□ -0.22
RPM1RPM1 ALD2P47771 506 aa13.66□□□□□ -0.22
RPM1RPM1 EDE1P34216 1381 aa13.65□□□□□ -0.22
RPM1RPM1 EBP2P36049 427 aaKnown RBP13.64□□□□□ -0.23
RPM1RPM1 NPR2P39923 615 aa13.63□□□□□ -0.23
RPM1RPM1 DOT5P40553 215 aa13.63□□□□□ -0.23
RPM1RPM1 CAB1Q04430 367 aa13.63□□□□□ -0.23
RPM1RPM1 ORC1P54784 914 aaPredicted RBP13.6□□□□□ -0.23
RPM1RPM1 URB1P34241 1764 aaKnown RBP13.59□□□□□ -0.23
RPM1RPM1 KRI1P42846 591 aaKnown RBP13.59□□□□□ -0.23
RPM1RPM1 CTH1P47976 325 aa13.57□□□□□ -0.24
RPM1RPM1 RIM101P33400 625 aa13.55□□□□□ -0.24
RPM1RPM1 CAB3P36076 571 aa13.55□□□□□ -0.24
RPM1RPM1 RAD9P14737 1309 aa13.54□□□□□ -0.24
RPM1RPM1 TAF5P38129 798 aa13.53□□□□□ -0.24
RPM1RPM1 ALD4P46367 519 aaKnown RBP13.52□□□□□ -0.25
RPM1RPM1 FOX2Q02207 900 aaKnown RBP13.52□□□□□ -0.25
RPM1RPM1 PSK1P31374 1356 aa13.51□□□□□ -0.25
RPM1RPM1 RLF2Q12495 606 aa13.51□□□□□ -0.25
RPM1RPM1 YJL181WP46987 611 aa13.5□□□□□ -0.25
RPM1RPM1 DMA2P53924 522 aa13.5□□□□□ -0.25
RPM1RPM1 PRP5P21372 849 aaPredicted RBP13.49□□□□□ -0.25
RPM1RPM1 IES2P40154 320 aa13.48□□□□□ -0.25
RPM1RPM1 ROM2P51862 1356 aaKnown RBP13.46□□□□□ -0.25
RPM1RPM1 FKS3Q04952 1785 aa13.43□□□□□ -0.26
RPM1RPM1 TY4B-HP0C2J7 1802 aa13.42□□□□□ -0.26
RPM1RPM1 TY4B-JP47024 1803 aa13.42□□□□□ -0.26
RPM1RPM1 MSB3P48566 633 aaPredicted RBP13.41□□□□□ -0.26
RPM1RPM1 CPS1P27614 576 aa13.4□□□□□ -0.26
RPM1RPM1 RAV1P47104 1357 aa13.39□□□□□ -0.27
RPM1RPM1 YEF3P16521 1044 aaKnown RBP13.38□□□□□ -0.27
RPM1RPM1 PRP40P33203 583 aaKnown RBP13.38□□□□□ -0.27
RPM1RPM1 LAM6Q08001 693 aa13.37□□□□□ -0.27
RPM1RPM1 YBL029C-AQ3E756 94 aa13.37□□□□□ -0.27
RPM1RPM1 RSF2P46974 1380 aa13.32□□□□□ -0.28
RPM1RPM1 YRF1-3P0CX14 1859 aa13.32□□□□□ -0.28
RPM1RPM1 YRF1-7P0CX15 1859 aa13.32□□□□□ -0.28
RPM1RPM1 YRF1-6P53819 1859 aa13.32□□□□□ -0.28
RPM1RPM1 MST1P07236 462 aa13.31□□□□□ -0.28
RPM1RPM1 BRL1P38770 471 aa13.31□□□□□ -0.28
RPM1RPM1 EPS1P40557 701 aa13.3□□□□□ -0.28
RPM1RPM1 SSA4P22202 642 aaKnown RBP13.29□□□□□ -0.28
RPM1RPM1 TCB1Q12466 1186 aa13.29□□□□□ -0.28
RPM1RPM1 BDF1P35817 686 aa13.28□□□□□ -0.28
RPM1RPM1 YKR075CP36155 307 aa13.28□□□□□ -0.28
RPM1RPM1 COBP00163 385 aa13.26□□□□□ -0.29
RPM1RPM1 RCM1P53972 490 aa13.26□□□□□ -0.29
RPM1RPM1 RTC1Q08281 1341 aa13.24□□□□□ -0.29
RPM1RPM1 SNF2P22082 1703 aa13.24□□□□□ -0.29
RPM1RPM1 EAF6P47128 113 aa13.23□□□□□ -0.29
RPM1RPM1 SUB1P54000 292 aaKnown RBP13.23□□□□□ -0.29
RPM1RPM1 YOR238WQ08634 303 aa13.23□□□□□ -0.29
RPM1RPM1 ADE6P38972 1358 aaKnown RBP13.22□□□□□ -0.29
RPM1RPM1 YKL133CP36066 463 aa13.21□□□□□ -0.29
RPM1RPM1 SPT7P35177 1332 aa13.2□□□□□ -0.3
RPM1RPM1 PPH3P32345 308 aa13.2□□□□□ -0.3
RPM1RPM1 PEX21P50091 288 aa13.2□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms