RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	PHF12	Q96QT6	1004 aa		12.01	□□□□□ -0.49
SMARCA2-223	ENST00000634435	WDR70	Q9NW82	654 aa		12.01	□□□□□ -0.49
SMARCA2-223	ENST00000634435	PCDHB8	Q9UN66	801 aa		12.01	□□□□□ -0.49
SMARCA2-223	ENST00000634435	PCDHB13	Q9Y5F0	798 aa		12.01	□□□□□ -0.49
SMARCA2-223	ENST00000634435	RIMBP3C	A6NJZ7	1639 aa		12	□□□□□ -0.49
SMARCA2-223	ENST00000634435	RIMBP3B	A6NNM3	1639 aa		12	□□□□□ -0.49
SMARCA2-223	ENST00000634435	RIMBP3	Q9UFD9	1639 aa		12	□□□□□ -0.49
SMARCA2-223	ENST00000634435	ARHGEF11	O15085	1522 aa		11.99	□□□□□ -0.49
SMARCA2-223	ENST00000634435	CADPS2	Q86UW7	1296 aa		11.98	□□□□□ -0.49
SMARCA2-223	ENST00000634435	MFRP	Q9BY79	579 aa		11.97	□□□□□ -0.49
SMARCA2-223	ENST00000634435	TOPBP1	Q92547	1522 aa		11.96	□□□□□ -0.49
SMARCA2-223	ENST00000634435	CCDC88B	A6NC98	1476 aa		11.95	□□□□□ -0.5
SMARCA2-223	ENST00000634435	PRDM2	Q13029	1718 aa		11.95	□□□□□ -0.5
SMARCA2-223	ENST00000634435	KCNV2	Q8TDN2	545 aa		11.95	□□□□□ -0.5
SMARCA2-223	ENST00000634435	EIF4G3	O43432	1585 aa	Known RBP	11.93	□□□□□ -0.5
SMARCA2-223	ENST00000634435	POTEM	A6NI47	508 aa		11.93	□□□□□ -0.5
SMARCA2-223	ENST00000634435	PELP1	Q8IZL8	1130 aa	Known RBP	11.92	□□□□□ -0.5
SMARCA2-223	ENST00000634435	ABCC8	Q09428	1581 aa		11.91	□□□□□ -0.5
SMARCA2-223	ENST00000634435	DNMBP	Q6XZF7	1577 aa		11.91	□□□□□ -0.5
SMARCA2-223	ENST00000634435	CYB5RL	Q6IPT4	315 aa		11.9	□□□□□ -0.5
SMARCA2-223	ENST00000634435	SOX12	O15370	315 aa		11.89	□□□□□ -0.51
SMARCA2-223	ENST00000634435	NLRP6	P59044	892 aa		11.89	□□□□□ -0.51
SMARCA2-223	ENST00000634435	IFNL1	Q8IU54	200 aa		11.89	□□□□□ -0.51
SMARCA2-223	ENST00000634435	POTEG	Q6S5H5	508 aa		11.88	□□□□□ -0.51
SMARCA2-223	ENST00000634435	AQR	O60306	1485 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
SMARCA2-223	ENST00000634435	FBXO22	Q8NEZ5	403 aa		11.87	□□□□□ -0.51
SMARCA2-223	ENST00000634435	KIF12	Q96FN5	646 aa		11.86	□□□□□ -0.51
SMARCA2-223	ENST00000634435	ARAP1	Q96P48	1450 aa		11.86	□□□□□ -0.51
SMARCA2-223	ENST00000634435	MAP3K13	O43283	966 aa		11.85	□□□□□ -0.51
SMARCA2-223	ENST00000634435	EFCAB3	Q8N7B9	438 aa		11.85	□□□□□ -0.51
SMARCA2-223	ENST00000634435	POLA1	P09884	1462 aa	Predicted RBP	11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	ASTL	Q6HA08	431 aa	Predicted RBP	11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	LMOD2	Q6P5Q4	547 aa		11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	ARHGEF1	Q92888	912 aa	Known RBP	11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	MS4A3	Q96HJ5	214 aa		11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	METRN	Q9UJH8	293 aa		11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	TARBP1	Q13395	1621 aa	Known RBP	11.84	□□□□□ -0.51
SMARCA2-223	ENST00000634435	TULP1	O00294	542 aa	Predicted RBP	11.83	□□□□□ -0.52
SMARCA2-223	ENST00000634435	CABP2	Q9NPB3	220 aa		11.83	□□□□□ -0.52
SMARCA2-223	ENST00000634435	CHD1	O14646	1710 aa		11.83	□□□□□ -0.52
SMARCA2-223	ENST00000634435	PPP1R37	O75864	691 aa		11.82	□□□□□ -0.52
SMARCA2-223	ENST00000634435	SLC39A7	Q92504	469 aa		11.82	□□□□□ -0.52
SMARCA2-223	ENST00000634435	ATMIN	O43313	823 aa	Predicted RBP	11.81	□□□□□ -0.52
SMARCA2-223	ENST00000634435	C7	P10643	843 aa		11.8	□□□□□ -0.52
SMARCA2-223	ENST00000634435	PHF8	Q9UPP1	1060 aa		11.8	□□□□□ -0.52
SMARCA2-223	ENST00000634435	RAD54L2	Q9Y4B4	1467 aa		11.8	□□□□□ -0.52
SMARCA2-223	ENST00000634435	TDRD9	Q8NDG6	1382 aa	Known RBP	11.79	□□□□□ -0.52
SMARCA2-223	ENST00000634435	E2F4	Q16254	413 aa		11.79	□□□□□ -0.52
SMARCA2-223	ENST00000634435	SNAPC4	Q5SXM2	1469 aa		11.78	□□□□□ -0.52
SMARCA2-223	ENST00000634435	SOGA1	O94964	1423 aa		11.77	□□□□□ -0.52
SMARCA2-223	ENST00000634435	POTEJ	P0CG39	1038 aa		11.76	□□□□□ -0.53
SMARCA2-223	ENST00000634435	TMEM132A	Q24JP5	1023 aa		11.76	□□□□□ -0.53
SMARCA2-223	ENST00000634435	MAMSTR	Q6ZN01	415 aa		11.76	□□□□□ -0.53
SMARCA2-223	ENST00000634435	PCDH10	Q9P2E7	1040 aa		11.76	□□□□□ -0.53
SMARCA2-223	ENST00000634435	FGD5	Q6ZNL6	1462 aa		11.75	□□□□□ -0.53
SMARCA2-223	ENST00000634435	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.74	□□□□□ -0.53
SMARCA2-223	ENST00000634435	CLASP1	Q7Z460	1538 aa		11.73	□□□□□ -0.53
SMARCA2-223	ENST00000634435	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.73	□□□□□ -0.53
SMARCA2-223	ENST00000634435	WDR97	A6NE52	1622 aa		11.72	□□□□□ -0.53
SMARCA2-223	ENST00000634435	SYNJ1	O43426	1573 aa		11.72	□□□□□ -0.53
SMARCA2-223	ENST00000634435	GTF3C3	Q9Y5Q9	886 aa		11.72	□□□□□ -0.53
SMARCA2-223	ENST00000634435	GRIN2B	Q13224	1484 aa		11.7	□□□□□ -0.54
SMARCA2-223	ENST00000634435	NCKAP5L	Q9HCH0	1330 aa		11.7	□□□□□ -0.54
SMARCA2-223	ENST00000634435	PDE4A	P27815	886 aa		11.7	□□□□□ -0.54
SMARCA2-223	ENST00000634435	TESPA1	A2RU30	521 aa	Predicted RBP	11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	ATN1	P54259	1190 aa	Predicted RBP	11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	MFSD10	Q14728	455 aa		11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	ERICH6	Q7L0X2	663 aa		11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	CUX1	P39880	1505 aa		11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	SYNJ2	O15056	1496 aa		11.69	□□□□□ -0.54
SMARCA2-223	ENST00000634435	MS4A4A	Q96JQ5	239 aa		11.68	□□□□□ -0.54
SMARCA2-223	ENST00000634435	SCUBE2	Q9NQ36	999 aa		11.67	□□□□□ -0.54
SMARCA2-223	ENST00000634435	GOLGA2	Q08379	1002 aa		11.66	□□□□□ -0.54
SMARCA2-223	ENST00000634435	LARP6	Q9BRS8	491 aa	Known RBP	11.66	□□□□□ -0.54
SMARCA2-223	ENST00000634435	CRISPLD2	Q9H0B8	497 aa		11.66	□□□□□ -0.54
SMARCA2-223	ENST00000634435	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.66	□□□□□ -0.54
SMARCA2-223	ENST00000634435	SEMA3E	O15041	775 aa		11.65	□□□□□ -0.54
SMARCA2-223	ENST00000634435	LCE2D	Q5TA82	110 aa	Predicted RBP	11.65	□□□□□ -0.54
SMARCA2-223	ENST00000634435	ZC3H15	Q8WU90	426 aa	Known RBP	11.65	□□□□□ -0.54
SMARCA2-223	ENST00000634435	FAM163A	Q96GL9	167 aa	Predicted RBP	11.65	□□□□□ -0.54
SMARCA2-223	ENST00000634435	GAPVD1	Q14C86	1478 aa		11.64	□□□□□ -0.55
SMARCA2-223	ENST00000634435	TIMELESS	Q9UNS1	1208 aa		11.64	□□□□□ -0.55
SMARCA2-223	ENST00000634435	DDX27	Q96GQ7	796 aa	Known RBP	11.63	□□□□□ -0.55
SMARCA2-223	ENST00000634435	TMEM106C	Q9BVX2	250 aa		11.63	□□□□□ -0.55
SMARCA2-223	ENST00000634435	SMYD5	Q6GMV2	418 aa		11.62	□□□□□ -0.55
SMARCA2-223	ENST00000634435	ABCA10	Q8WWZ4	1543 aa		11.6	□□□□□ -0.55
SMARCA2-223	ENST00000634435	MKRN3	Q13064	507 aa	Known RBP	11.59	□□□□□ -0.55
SMARCA2-223	ENST00000634435	CAMK2B	Q13554	666 aa		11.59	□□□□□ -0.55
SMARCA2-223	ENST00000634435	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-223	ENST00000634435	PBRM1	Q86U86	1689 aa		11.59	□□□□□ -0.55
SMARCA2-223	ENST00000634435	POTEF	A5A3E0	1075 aa		11.58	□□□□□ -0.56
SMARCA2-223	ENST00000634435	BRPF1	P55201	1214 aa	Predicted RBP	11.58	□□□□□ -0.56
SMARCA2-223	ENST00000634435	ABCA5	Q8WWZ7	1642 aa		11.57	□□□□□ -0.56
SMARCA2-223	ENST00000634435	TRPC6	Q9Y210	931 aa		11.57	□□□□□ -0.56
SMARCA2-223	ENST00000634435	GRIN2A	Q12879	1464 aa		11.56	□□□□□ -0.56
SMARCA2-223	ENST00000634435	TIE1	P35590	1138 aa		11.55	□□□□□ -0.56
SMARCA2-223	ENST00000634435	ILDR1	Q86SU0	546 aa	Predicted RBP	11.54	□□□□□ -0.56
SMARCA2-223	ENST00000634435	ADAMTS12	P58397	1594 aa		11.53	□□□□□ -0.56
SMARCA2-223	ENST00000634435	ERCC6L2	Q5T890	1561 aa		11.53	□□□□□ -0.56

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