RNA–Protein interactions for RNA: ENST00000584632.5

CDK12-209, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-209ENST00000584632 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
CDK12-209ENST00000584632 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
CDK12-209ENST00000584632 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
CDK12-209ENST00000584632 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
CDK12-209ENST00000584632 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
CDK12-209ENST00000584632 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
CDK12-209ENST00000584632 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
CDK12-209ENST00000584632 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
CDK12-209ENST00000584632 MIA2Q96PC5 1412 aa17.87■□□□□ 0.45
CDK12-209ENST00000584632 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
CDK12-209ENST00000584632 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
CDK12-209ENST00000584632 SMG6Q86US8 1419 aaKnown RBP17.86■□□□□ 0.45
CDK12-209ENST00000584632 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
CDK12-209ENST00000584632 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
CDK12-209ENST00000584632 PKD2Q13563 968 aa17.85■□□□□ 0.45
CDK12-209ENST00000584632 RALBP1Q15311 655 aa17.85■□□□□ 0.45
CDK12-209ENST00000584632 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
CDK12-209ENST00000584632 USP47Q96K76 1375 aa17.84■□□□□ 0.45
CDK12-209ENST00000584632 NEFMP07197 916 aa17.83■□□□□ 0.45
CDK12-209ENST00000584632 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
CDK12-209ENST00000584632 AKNAQ7Z591 1439 aa17.82■□□□□ 0.44
CDK12-209ENST00000584632 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
CDK12-209ENST00000584632 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
CDK12-209ENST00000584632 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
CDK12-209ENST00000584632 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
CDK12-209ENST00000584632 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
CDK12-209ENST00000584632 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
CDK12-209ENST00000584632 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
CDK12-209ENST00000584632 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
CDK12-209ENST00000584632 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
CDK12-209ENST00000584632 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
CDK12-209ENST00000584632 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
CDK12-209ENST00000584632 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
CDK12-209ENST00000584632 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
CDK12-209ENST00000584632 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
CDK12-209ENST00000584632 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
CDK12-209ENST00000584632 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
CDK12-209ENST00000584632 UGGT2Q9NYU1 1516 aa17.76■□□□□ 0.43
CDK12-209ENST00000584632 ROCK1Q13464 1354 aa17.76■□□□□ 0.43
CDK12-209ENST00000584632 RPRD2Q5VT52 1461 aaKnown RBP17.76■□□□□ 0.43
CDK12-209ENST00000584632 HECW1Q76N89 1606 aa17.75■□□□□ 0.43
CDK12-209ENST00000584632 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
CDK12-209ENST00000584632 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
CDK12-209ENST00000584632 FBLN2P98095 1184 aa17.74■□□□□ 0.43
CDK12-209ENST00000584632 NLRP13Q86W25 1043 aa17.74■□□□□ 0.43
CDK12-209ENST00000584632 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
CDK12-209ENST00000584632 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
CDK12-209ENST00000584632 PDE4AP27815 886 aa17.73■□□□□ 0.43
CDK12-209ENST00000584632 MS4A1P11836 297 aa17.72■□□□□ 0.43
CDK12-209ENST00000584632 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
CDK12-209ENST00000584632 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
CDK12-209ENST00000584632 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
CDK12-209ENST00000584632 DAPK1P53355 1430 aa17.71■□□□□ 0.43
CDK12-209ENST00000584632 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.43
CDK12-209ENST00000584632 NUP155O75694 1391 aa17.71■□□□□ 0.43
CDK12-209ENST00000584632 WDR43Q15061 677 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■□□□ 13.5
CDK12-209ENST00000584632 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
CDK12-209ENST00000584632 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
CDK12-209ENST00000584632 NESP48681 1621 aa17.69■□□□□ 0.42
CDK12-209ENST00000584632 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
CDK12-209ENST00000584632 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
CDK12-209ENST00000584632 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
CDK12-209ENST00000584632 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
CDK12-209ENST00000584632 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
CDK12-209ENST00000584632 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
CDK12-209ENST00000584632 ABCC5O15440 1437 aa17.63■□□□□ 0.41
CDK12-209ENST00000584632 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
CDK12-209ENST00000584632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.414e-9■■□□□ 14
CDK12-209ENST00000584632 SAMD9Q5K651 1589 aa17.61■□□□□ 0.41
CDK12-209ENST00000584632 TMF1P82094 1093 aa17.6■□□□□ 0.41
CDK12-209ENST00000584632 GCC2Q8IWJ2 1684 aa17.6■□□□□ 0.41
CDK12-209ENST00000584632 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
CDK12-209ENST00000584632 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
CDK12-209ENST00000584632 BACH2Q9BYV9 841 aa17.58■□□□□ 0.41
CDK12-209ENST00000584632 ANKRD50Q9ULJ7 1429 aa17.58■□□□□ 0.4
CDK12-209ENST00000584632 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
CDK12-209ENST00000584632 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
CDK12-209ENST00000584632 KDM5BQ9UGL1 1544 aa17.57■□□□□ 0.4
CDK12-209ENST00000584632 DHX29Q7Z478 1369 aaKnown RBP17.56■□□□□ 0.4
CDK12-209ENST00000584632 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
CDK12-209ENST00000584632 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
CDK12-209ENST00000584632 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
CDK12-209ENST00000584632 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
CDK12-209ENST00000584632 PLIN1O60240 522 aa17.54■□□□□ 0.4
CDK12-209ENST00000584632 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
CDK12-209ENST00000584632 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
CDK12-209ENST00000584632 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
CDK12-209ENST00000584632 RGS3P49796 1198 aa17.53■□□□□ 0.4
CDK12-209ENST00000584632 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
CDK12-209ENST00000584632 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
CDK12-209ENST00000584632 ARHGEF11O15085 1522 aa17.52■□□□□ 0.4
CDK12-209ENST00000584632 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
CDK12-209ENST00000584632 BECN1Q14457 450 aa17.52■□□□□ 0.39
CDK12-209ENST00000584632 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.39
CDK12-209ENST00000584632 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
CDK12-209ENST00000584632 MAGI3Q5TCQ9 1506 aa17.51■□□□□ 0.39
CDK12-209ENST00000584632 GSE1Q14687 1217 aa17.51■□□□□ 0.39
CDK12-209ENST00000584632 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
CDK12-209ENST00000584632 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
CDK12-209ENST00000584632 PANK3Q9H999 370 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms