RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
SPG11-204ENST00000557866 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
SPG11-204ENST00000557866 WDR62O43379 1518 aa11.67□□□□□ -0.54
SPG11-204ENST00000557866 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
SPG11-204ENST00000557866 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
SPG11-204ENST00000557866 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
SPG11-204ENST00000557866 CLIP1P30622 1438 aa11.64□□□□□ -0.55
SPG11-204ENST00000557866 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
SPG11-204ENST00000557866 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
SPG11-204ENST00000557866 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
SPG11-204ENST00000557866 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
SPG11-204ENST00000557866 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
SPG11-204ENST00000557866 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
SPG11-204ENST00000557866 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
SPG11-204ENST00000557866 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
SPG11-204ENST00000557866 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
SPG11-204ENST00000557866 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
SPG11-204ENST00000557866 AQRO60306 1485 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPG11-204ENST00000557866 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
SPG11-204ENST00000557866 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
SPG11-204ENST00000557866 IER5LQ5T953 404 aa11.59□□□□□ -0.55
SPG11-204ENST00000557866 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.56
SPG11-204ENST00000557866 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
SPG11-204ENST00000557866 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
SPG11-204ENST00000557866 SEC24BO95487 1268 aa11.55□□□□□ -0.56
SPG11-204ENST00000557866 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
SPG11-204ENST00000557866 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
SPG11-204ENST00000557866 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
SPG11-204ENST00000557866 CUL7Q14999 1698 aa11.54□□□□□ -0.56
SPG11-204ENST00000557866 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
SPG11-204ENST00000557866 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
SPG11-204ENST00000557866 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
SPG11-204ENST00000557866 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
SPG11-204ENST00000557866 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
SPG11-204ENST00000557866 PSEN1P49768 467 aa11.5□□□□□ -0.57
SPG11-204ENST00000557866 COLQQ9Y215 455 aaPredicted RBP11.5□□□□□ -0.57
SPG11-204ENST00000557866 POTEMA6NI47 508 aa11.48□□□□□ -0.57
SPG11-204ENST00000557866 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
SPG11-204ENST00000557866 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
SPG11-204ENST00000557866 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
SPG11-204ENST00000557866 SNAPC4Q5SXM2 1469 aa11.46□□□□□ -0.57
SPG11-204ENST00000557866 PBRM1Q86U86 1689 aa11.46□□□□□ -0.58
SPG11-204ENST00000557866 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
SPG11-204ENST00000557866 PLCG2P16885 1265 aa11.45□□□□□ -0.58
SPG11-204ENST00000557866 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SPG11-204ENST00000557866 GOLGA2Q08379 1002 aa11.45□□□□□ -0.58
SPG11-204ENST00000557866 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
SPG11-204ENST00000557866 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
SPG11-204ENST00000557866 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
SPG11-204ENST00000557866 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
SPG11-204ENST00000557866 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
SPG11-204ENST00000557866 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
SPG11-204ENST00000557866 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
SPG11-204ENST00000557866 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
SPG11-204ENST00000557866 KANK4Q5T7N3 995 aaPredicted RBP11.39□□□□□ -0.59
SPG11-204ENST00000557866 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
SPG11-204ENST00000557866 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
SPG11-204ENST00000557866 PCDH10Q9P2E7 1040 aa11.38□□□□□ -0.59
SPG11-204ENST00000557866 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
SPG11-204ENST00000557866 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
SPG11-204ENST00000557866 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
SPG11-204ENST00000557866 CHMP7Q8WUX9 453 aaPredicted RBP11.37□□□□□ -0.59
SPG11-204ENST00000557866 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
SPG11-204ENST00000557866 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
SPG11-204ENST00000557866 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
SPG11-204ENST00000557866 NUP160Q12769 1436 aa11.34□□□□□ -0.59
SPG11-204ENST00000557866 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
SPG11-204ENST00000557866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.66e-7■■■□□ 16.3
SPG11-204ENST00000557866 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
SPG11-204ENST00000557866 CASKIN1Q8WXD9 1431 aa11.33□□□□□ -0.6
SPG11-204ENST00000557866 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
SPG11-204ENST00000557866 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
SPG11-204ENST00000557866 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
SPG11-204ENST00000557866 FMN1Q68DA7 1419 aa11.31□□□□□ -0.6
SPG11-204ENST00000557866 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
SPG11-204ENST00000557866 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
SPG11-204ENST00000557866 PCF11O94913 1555 aaKnown RBP11.3□□□□□ -0.6
SPG11-204ENST00000557866 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
SPG11-204ENST00000557866 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
SPG11-204ENST00000557866 HRCP23327 699 aa11.29□□□□□ -0.6
SPG11-204ENST00000557866 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
SPG11-204ENST00000557866 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
SPG11-204ENST00000557866 DISP1Q96F81 1524 aa11.29□□□□□ -0.6
SPG11-204ENST00000557866 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
SPG11-204ENST00000557866 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
SPG11-204ENST00000557866 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
SPG11-204ENST00000557866 TIAM1Q13009 1591 aa11.27□□□□□ -0.61
SPG11-204ENST00000557866 LRRC9Q6ZRR7 1453 aa11.26□□□□□ -0.61
SPG11-204ENST00000557866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
SPG11-204ENST00000557866 PKD2Q13563 968 aa11.26□□□□□ -0.61
SPG11-204ENST00000557866 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
SPG11-204ENST00000557866 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
SPG11-204ENST00000557866 SLAIN1Q8ND83 568 aa11.24□□□□□ -0.61
SPG11-204ENST00000557866 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
SPG11-204ENST00000557866 LCE2DQ5TA82 110 aaPredicted RBP11.23□□□□□ -0.61
SPG11-204ENST00000557866 KIAA0556O60303 1618 aa11.23□□□□□ -0.61
SPG11-204ENST00000557866 RRBP1Q9P2E9 1410 aaKnown RBP11.21□□□□□ -0.61
SPG11-204ENST00000557866 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
SPG11-204ENST00000557866 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
SPG11-204ENST00000557866 SOX12O15370 315 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms