RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 WDR62O43379 1518 aa9.86□□□□□ -0.83
ATXN3-230ENST00000554673 PLCG2P16885 1265 aa9.85□□□□□ -0.83
ATXN3-230ENST00000554673 ABCA5Q8WWZ7 1642 aa9.83□□□□□ -0.84
ATXN3-230ENST00000554673 ST18O60284 1047 aa9.83□□□□□ -0.84
ATXN3-230ENST00000554673 FAM9AQ8IZU1 332 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-230ENST00000554673 MRC2Q9UBG0 1479 aa9.82□□□□□ -0.84
ATXN3-230ENST00000554673 PDS5BQ9NTI5 1447 aa9.81□□□□□ -0.84
ATXN3-230ENST00000554673 KIF21BO75037 1637 aa9.8□□□□□ -0.84
ATXN3-230ENST00000554673 ABCA10Q8WWZ4 1543 aa9.8□□□□□ -0.84
ATXN3-230ENST00000554673 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
ATXN3-230ENST00000554673 PYGBP11216 843 aa9.78□□□□□ -0.84
ATXN3-230ENST00000554673 ZNF608Q9ULD9 1512 aaPredicted RBP9.77□□□□□ -0.84
ATXN3-230ENST00000554673 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
ATXN3-230ENST00000554673 PRXQ9BXM0 1461 aa9.77□□□□□ -0.85
ATXN3-230ENST00000554673 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.85
ATXN3-230ENST00000554673 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
ATXN3-230ENST00000554673 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-230ENST00000554673 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
ATXN3-230ENST00000554673 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
ATXN3-230ENST00000554673 IGF1RP08069 1367 aa9.73□□□□□ -0.85
ATXN3-230ENST00000554673 EIF4G3O43432 1585 aaKnown RBP9.72□□□□□ -0.85
ATXN3-230ENST00000554673 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
ATXN3-230ENST00000554673 EEA1Q15075 1411 aa9.71□□□□□ -0.86
ATXN3-230ENST00000554673 TDRD9Q8NDG6 1382 aaKnown RBP9.7□□□□□ -0.86
ATXN3-230ENST00000554673 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATXN3-230ENST00000554673 ERICH3Q5RHP9 1530 aa9.69□□□□□ -0.86
ATXN3-230ENST00000554673 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
ATXN3-230ENST00000554673 ADAMTS12P58397 1594 aa9.68□□□□□ -0.86
ATXN3-230ENST00000554673 ERCC6Q03468 1493 aa9.68□□□□□ -0.86
ATXN3-230ENST00000554673 KIF27Q86VH2 1401 aa9.68□□□□□ -0.86
ATXN3-230ENST00000554673 SNPHO15079 494 aa9.67□□□□□ -0.86
ATXN3-230ENST00000554673 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
ATXN3-230ENST00000554673 CUL7Q14999 1698 aa9.65□□□□□ -0.86
ATXN3-230ENST00000554673 GAPVD1Q14C86 1478 aa9.65□□□□□ -0.87
ATXN3-230ENST00000554673 IFT140Q96RY7 1462 aa9.65□□□□□ -0.87
ATXN3-230ENST00000554673 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
ATXN3-230ENST00000554673 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
ATXN3-230ENST00000554673 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
ATXN3-230ENST00000554673 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-230ENST00000554673 CTTNBP2Q8WZ74 1663 aa9.64□□□□□ -0.87
ATXN3-230ENST00000554673 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
ATXN3-230ENST00000554673 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
ATXN3-230ENST00000554673 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
ATXN3-230ENST00000554673 BCANQ96GW7 911 aa9.61□□□□□ -0.87
ATXN3-230ENST00000554673 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
ATXN3-230ENST00000554673 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
ATXN3-230ENST00000554673 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-230ENST00000554673 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
ATXN3-230ENST00000554673 CARMIL1Q5VZK9 1371 aa9.6□□□□□ -0.87
ATXN3-230ENST00000554673 CHD1O14646 1710 aa9.59□□□□□ -0.87
ATXN3-230ENST00000554673 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
ATXN3-230ENST00000554673 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
ATXN3-230ENST00000554673 EMP3P54852 163 aa9.58□□□□□ -0.88
ATXN3-230ENST00000554673 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
ATXN3-230ENST00000554673 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
ATXN3-230ENST00000554673 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
ATXN3-230ENST00000554673 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
ATXN3-230ENST00000554673 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
ATXN3-230ENST00000554673 HAP1P54257 671 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-230ENST00000554673 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-230ENST00000554673 TAOK2Q9UL54 1235 aa9.56□□□□□ -0.88
ATXN3-230ENST00000554673 GSE1Q14687 1217 aa9.55□□□□□ -0.88
ATXN3-230ENST00000554673 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-230ENST00000554673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■□□□ 13.5
ATXN3-230ENST00000554673 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
ATXN3-230ENST00000554673 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
ATXN3-230ENST00000554673 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
ATXN3-230ENST00000554673 PSEN1P49768 467 aa9.52□□□□□ -0.89
ATXN3-230ENST00000554673 GRIN2AQ12879 1464 aa9.51□□□□□ -0.89
ATXN3-230ENST00000554673 CLIP1P30622 1438 aa9.5□□□□□ -0.89
ATXN3-230ENST00000554673 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
ATXN3-230ENST00000554673 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
ATXN3-230ENST00000554673 MAGI1Q96QZ7 1491 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-230ENST00000554673 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-230ENST00000554673 NUP160Q12769 1436 aa9.48□□□□□ -0.89
ATXN3-230ENST00000554673 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
ATXN3-230ENST00000554673 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
ATXN3-230ENST00000554673 SYNJ2O15056 1496 aa9.47□□□□□ -0.89
ATXN3-230ENST00000554673 PCF11O94913 1555 aaKnown RBP9.47□□□□□ -0.89
ATXN3-230ENST00000554673 ERCC6L2Q5T890 1561 aa9.47□□□□□ -0.89
ATXN3-230ENST00000554673 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
ATXN3-230ENST00000554673 DISP1Q96F81 1524 aa9.46□□□□□ -0.89
ATXN3-230ENST00000554673 IQGAP2Q13576 1575 aa9.46□□□□□ -0.89
ATXN3-230ENST00000554673 G3V3G9 751 aa9.46□□□□□ -0.9
ATXN3-230ENST00000554673 UBTFP17480 764 aaKnown RBP9.46□□□□□ -0.9
ATXN3-230ENST00000554673 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
ATXN3-230ENST00000554673 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
ATXN3-230ENST00000554673 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
ATXN3-230ENST00000554673 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
ATXN3-230ENST00000554673 UGGT2Q9NYU1 1516 aa9.45□□□□□ -0.9
ATXN3-230ENST00000554673 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
ATXN3-230ENST00000554673 FHOD3Q2V2M9 1422 aa9.44□□□□□ -0.9
ATXN3-230ENST00000554673 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
ATXN3-230ENST00000554673 VPS8Q8N3P4 1428 aa9.43□□□□□ -0.9
ATXN3-230ENST00000554673 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-230ENST00000554673 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
ATXN3-230ENST00000554673 CFAP43Q8NDM7 1665 aa9.42□□□□□ -0.9
ATXN3-230ENST00000554673 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-230ENST00000554673 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
ATXN3-230ENST00000554673 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms