RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
PRIM1-202ENST00000546761 DNMBPQ6XZF7 1577 aa8.43□□□□□ -1.06
PRIM1-202ENST00000546761 ST18O60284 1047 aa8.42□□□□□ -1.06
PRIM1-202ENST00000546761 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
PRIM1-202ENST00000546761 SNPHO15079 494 aa8.41□□□□□ -1.06
PRIM1-202ENST00000546761 ERCC6Q03468 1493 aa8.4□□□□□ -1.06
PRIM1-202ENST00000546761 C3orf67Q6ZVT6 689 aa8.4□□□□□ -1.06
PRIM1-202ENST00000546761 CUX1P39880 1505 aa8.39□□□□□ -1.07
PRIM1-202ENST00000546761 MRC2Q9UBG0 1479 aa8.38□□□□□ -1.07
PRIM1-202ENST00000546761 PSEN1P49768 467 aa8.38□□□□□ -1.07
PRIM1-202ENST00000546761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRIM1-202ENST00000546761 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
PRIM1-202ENST00000546761 THOC2Q8NI27 1593 aaKnown RBP8.37□□□□□ -1.07
PRIM1-202ENST00000546761 SPOCK2Q92563 424 aa8.37□□□□□ -1.07
PRIM1-202ENST00000546761 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
PRIM1-202ENST00000546761 WDR62O43379 1518 aa8.37□□□□□ -1.07
PRIM1-202ENST00000546761 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
PRIM1-202ENST00000546761 CHRM1P11229 460 aaPredicted RBP8.36□□□□□ -1.07
PRIM1-202ENST00000546761 G3V3G9 751 aa8.35□□□□□ -1.07
PRIM1-202ENST00000546761 FGD5Q6ZNL6 1462 aa8.34□□□□□ -1.07
PRIM1-202ENST00000546761 EEA1Q15075 1411 aa8.34□□□□□ -1.07
PRIM1-202ENST00000546761 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
PRIM1-202ENST00000546761 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
PRIM1-202ENST00000546761 PDCD7Q8N8D1 485 aaKnown RBP8.32□□□□□ -1.08
PRIM1-202ENST00000546761 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
PRIM1-202ENST00000546761 TMEM121BQ9BXQ6 578 aaPredicted RBP8.32□□□□□ -1.08
PRIM1-202ENST00000546761 POLA1P09884 1462 aaPredicted RBP8.32□□□□□ -1.08
PRIM1-202ENST00000546761 CABP2Q9NPB3 220 aa8.31□□□□□ -1.08
PRIM1-202ENST00000546761 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
PRIM1-202ENST00000546761 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
PRIM1-202ENST00000546761 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
PRIM1-202ENST00000546761 SOGA1O94964 1423 aa8.28□□□□□ -1.08
PRIM1-202ENST00000546761 KIF27Q86VH2 1401 aa8.28□□□□□ -1.08
PRIM1-202ENST00000546761 IFT140Q96RY7 1462 aa8.27□□□□□ -1.09
PRIM1-202ENST00000546761 EMP3P54852 163 aa8.27□□□□□ -1.09
PRIM1-202ENST00000546761 CUX2O14529 1486 aa8.26□□□□□ -1.09
PRIM1-202ENST00000546761 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
PRIM1-202ENST00000546761 DPY19L2Q6NUT2 758 aa8.25□□□□□ -1.09
PRIM1-202ENST00000546761 RAD54L2Q9Y4B4 1467 aa8.25□□□□□ -1.09
PRIM1-202ENST00000546761 CUL7Q14999 1698 aa8.24□□□□□ -1.09
PRIM1-202ENST00000546761 PBRM1Q86U86 1689 aa8.24□□□□□ -1.09
PRIM1-202ENST00000546761 KIF21BO75037 1637 aa8.23□□□□□ -1.09
PRIM1-202ENST00000546761 BOLA1Q9Y3E2 137 aa8.23□□□□□ -1.09
PRIM1-202ENST00000546761 ERICH3Q5RHP9 1530 aa8.22□□□□□ -1.09
PRIM1-202ENST00000546761 RUSC2Q8N2Y8 1516 aa8.21□□□□□ -1.1
PRIM1-202ENST00000546761 FAM205CA6NFA0 338 aa8.21□□□□□ -1.1
PRIM1-202ENST00000546761 EIF4G3O43432 1585 aaKnown RBP8.21□□□□□ -1.1
PRIM1-202ENST00000546761 GAPVD1Q14C86 1478 aa8.2□□□□□ -1.1
PRIM1-202ENST00000546761 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
PRIM1-202ENST00000546761 SPNS2Q8IVW8 549 aa8.19□□□□□ -1.1
PRIM1-202ENST00000546761 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
PRIM1-202ENST00000546761 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
PRIM1-202ENST00000546761 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
PRIM1-202ENST00000546761 MMRN1Q13201 1228 aa8.17□□□□□ -1.1
PRIM1-202ENST00000546761 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
PRIM1-202ENST00000546761 TDRD9Q8NDG6 1382 aaKnown RBP8.17□□□□□ -1.1
PRIM1-202ENST00000546761 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
PRIM1-202ENST00000546761 IGF1RP08069 1367 aa8.16□□□□□ -1.1
PRIM1-202ENST00000546761 HS3ST6Q96QI5 342 aa8.16□□□□□ -1.1
PRIM1-202ENST00000546761 ZNF608Q9ULD9 1512 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-202ENST00000546761 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
PRIM1-202ENST00000546761 ILDR1Q86SU0 546 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-202ENST00000546761 ADAMTS12P58397 1594 aa8.14□□□□□ -1.11
PRIM1-202ENST00000546761 AQRO60306 1485 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRIM1-202ENST00000546761 MAGI1Q96QZ7 1491 aaPredicted RBP8.14□□□□□ -1.11
PRIM1-202ENST00000546761 CARMIL1Q5VZK9 1371 aa8.13□□□□□ -1.11
PRIM1-202ENST00000546761 DOK7Q18PE1 504 aa8.13□□□□□ -1.11
PRIM1-202ENST00000546761 CTTNBP2Q8WZ74 1663 aa8.13□□□□□ -1.11
PRIM1-202ENST00000546761 FHAD1B1AJZ9 1412 aa8.12□□□□□ -1.11
PRIM1-202ENST00000546761 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
PRIM1-202ENST00000546761 ERBB3P21860 1342 aa8.11□□□□□ -1.11
PRIM1-202ENST00000546761 RIOK3O14730 519 aaKnown RBP8.11□□□□□ -1.11
PRIM1-202ENST00000546761 SNAPC4Q5SXM2 1469 aa8.11□□□□□ -1.11
PRIM1-202ENST00000546761 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
PRIM1-202ENST00000546761 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
PRIM1-202ENST00000546761 SYNJ2O15056 1496 aa8.1□□□□□ -1.11
PRIM1-202ENST00000546761 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-202ENST00000546761 DNAJC5Q9H3Z4 198 aa8.09□□□□□ -1.11
PRIM1-202ENST00000546761 POTEB3A0JP26 581 aa8.08□□□□□ -1.12
PRIM1-202ENST00000546761 SOX12O15370 315 aa8.08□□□□□ -1.12
PRIM1-202ENST00000546761 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
PRIM1-202ENST00000546761 POTEBQ6S5H4 581 aa8.08□□□□□ -1.12
PRIM1-202ENST00000546761 CHD1O14646 1710 aa8.07□□□□□ -1.12
PRIM1-202ENST00000546761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.07□□□□□ -1.12
PRIM1-202ENST00000546761 LOC105371045A0A1W2PR82 267 aa8.07□□□□□ -1.12
PRIM1-202ENST00000546761 VGFO15240 615 aaPredicted RBP8.07□□□□□ -1.12
PRIM1-202ENST00000546761 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
PRIM1-202ENST00000546761 GRIN2AQ12879 1464 aa8.06□□□□□ -1.12
PRIM1-202ENST00000546761 HOXB1P14653 301 aaPredicted RBP8.06□□□□□ -1.12
PRIM1-202ENST00000546761 MICALL2Q8IY33 904 aa8.06□□□□□ -1.12
PRIM1-202ENST00000546761 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
PRIM1-202ENST00000546761 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
PRIM1-202ENST00000546761 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
PRIM1-202ENST00000546761 PHF8Q9UPP1 1060 aa8.05□□□□□ -1.12
PRIM1-202ENST00000546761 CHMP7Q8WUX9 453 aaPredicted RBP8.04□□□□□ -1.12
PRIM1-202ENST00000546761 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
PRIM1-202ENST00000546761 CEP162Q5TB80 1403 aa8.03□□□□□ -1.12
PRIM1-202ENST00000546761 IQGAP2Q13576 1575 aa8.03□□□□□ -1.12
PRIM1-202ENST00000546761 VARS2Q5ST30 1063 aaKnown RBP8.03□□□□□ -1.12
PRIM1-202ENST00000546761 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms