RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
PRIM1-202ENST00000546761 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
PRIM1-202ENST00000546761 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
PRIM1-202ENST00000546761 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
PRIM1-202ENST00000546761 FOXD1Q16676 465 aa14.49□□□□□ -0.09
PRIM1-202ENST00000546761 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
PRIM1-202ENST00000546761 MSH5O43196 834 aa13.64□□□□□ -0.23
PRIM1-202ENST00000546761 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
PRIM1-202ENST00000546761 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
PRIM1-202ENST00000546761 ADRA2BP18089 450 aa13.46□□□□□ -0.25
PRIM1-202ENST00000546761 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
PRIM1-202ENST00000546761 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
PRIM1-202ENST00000546761 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-202ENST00000546761 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
PRIM1-202ENST00000546761 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
PRIM1-202ENST00000546761 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
PRIM1-202ENST00000546761 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-202ENST00000546761 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
PRIM1-202ENST00000546761 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
PRIM1-202ENST00000546761 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
PRIM1-202ENST00000546761 NISCHQ9Y2I1 1504 aa11.66□□□□□ -0.54
PRIM1-202ENST00000546761 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
PRIM1-202ENST00000546761 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
PRIM1-202ENST00000546761 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
PRIM1-202ENST00000546761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRIM1-202ENST00000546761 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
PRIM1-202ENST00000546761 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
PRIM1-202ENST00000546761 KCNA4P22459 653 aa11.04□□□□□ -0.64
PRIM1-202ENST00000546761 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
PRIM1-202ENST00000546761 CAPN15O75808 1086 aa10.99□□□□□ -0.65
PRIM1-202ENST00000546761 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
PRIM1-202ENST00000546761 DSG3P32926 999 aa10.82□□□□□ -0.68
PRIM1-202ENST00000546761 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
PRIM1-202ENST00000546761 APLP2Q06481 763 aa10.81□□□□□ -0.68
PRIM1-202ENST00000546761 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
PRIM1-202ENST00000546761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
PRIM1-202ENST00000546761 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
PRIM1-202ENST00000546761 ABCB7O75027 752 aa10.71□□□□□ -0.69
PRIM1-202ENST00000546761 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
PRIM1-202ENST00000546761 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
PRIM1-202ENST00000546761 POTEHQ6S545 545 aa10.57□□□□□ -0.72
PRIM1-202ENST00000546761 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
PRIM1-202ENST00000546761 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
PRIM1-202ENST00000546761 POLA2Q14181 598 aa10.43□□□□□ -0.74
PRIM1-202ENST00000546761 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
PRIM1-202ENST00000546761 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
PRIM1-202ENST00000546761 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
PRIM1-202ENST00000546761 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-202ENST00000546761 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
PRIM1-202ENST00000546761 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
PRIM1-202ENST00000546761 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
PRIM1-202ENST00000546761 ZBTB22O15209 634 aa10.09□□□□□ -0.79
PRIM1-202ENST00000546761 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
PRIM1-202ENST00000546761 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
PRIM1-202ENST00000546761 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
PRIM1-202ENST00000546761 FBLN2P98095 1184 aa9.97□□□□□ -0.81
PRIM1-202ENST00000546761 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
PRIM1-202ENST00000546761 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
PRIM1-202ENST00000546761 SPDYE2BA6NHP3 402 aa9.86□□□□□ -0.83
PRIM1-202ENST00000546761 HAX1O00165 279 aa9.86□□□□□ -0.83
PRIM1-202ENST00000546761 SPDYE6P0CI01 402 aa9.86□□□□□ -0.83
PRIM1-202ENST00000546761 SPDYE2Q495Y8 402 aa9.86□□□□□ -0.83
PRIM1-202ENST00000546761 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
PRIM1-202ENST00000546761 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
PRIM1-202ENST00000546761 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRIM1-202ENST00000546761 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
PRIM1-202ENST00000546761 ZCCHC6Q5VYS8 1495 aaKnown RBP9.78□□□□□ -0.84
PRIM1-202ENST00000546761 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
PRIM1-202ENST00000546761 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
PRIM1-202ENST00000546761 ABCC9O60706 1549 aa9.72□□□□□ -0.85
PRIM1-202ENST00000546761 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
PRIM1-202ENST00000546761 PRKAR2AP13861 404 aaKnown RBP9.69□□□□□ -0.86
PRIM1-202ENST00000546761 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
PRIM1-202ENST00000546761 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
PRIM1-202ENST00000546761 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
PRIM1-202ENST00000546761 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRIM1-202ENST00000546761 NACADO15069 1562 aa9.62□□□□□ -0.87
PRIM1-202ENST00000546761 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
PRIM1-202ENST00000546761 EVX2Q03828 476 aa9.59□□□□□ -0.87
PRIM1-202ENST00000546761 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
PRIM1-202ENST00000546761 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
PRIM1-202ENST00000546761 RB1CC1Q8TDY2 1594 aa9.57□□□□□ -0.88
PRIM1-202ENST00000546761 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
PRIM1-202ENST00000546761 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
PRIM1-202ENST00000546761 GABBR2O75899 941 aa9.42□□□□□ -0.9
PRIM1-202ENST00000546761 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
PRIM1-202ENST00000546761 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
PRIM1-202ENST00000546761 SCRIBQ14160 1630 aa9.37□□□□□ -0.91
PRIM1-202ENST00000546761 UNC13AQ9UPW8 1703 aa9.36□□□□□ -0.91
PRIM1-202ENST00000546761 STAG3Q9UJ98 1225 aa9.34□□□□□ -0.91
PRIM1-202ENST00000546761 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
PRIM1-202ENST00000546761 SHROOM4Q9ULL8 1493 aa9.28□□□□□ -0.92
PRIM1-202ENST00000546761 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
PRIM1-202ENST00000546761 LHX8Q68G74 356 aa9.25□□□□□ -0.93
PRIM1-202ENST00000546761 DCBLD2Q96PD2 775 aa9.24□□□□□ -0.93
PRIM1-202ENST00000546761 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
PRIM1-202ENST00000546761 CLCN6P51797 869 aa9.23□□□□□ -0.93
PRIM1-202ENST00000546761 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
PRIM1-202ENST00000546761 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
PRIM1-202ENST00000546761 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms