RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
C16orf62-212ENST00000540240 CFTRP13569 1480 aa14.51□□□□□ -0.09
C16orf62-212ENST00000540240 CDAN1Q8IWY9 1227 aa14.51□□□□□ -0.09
C16orf62-212ENST00000540240 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
C16orf62-212ENST00000540240 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
C16orf62-212ENST00000540240 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
C16orf62-212ENST00000540240 L3MBTL3Q96JM7 780 aaPredicted RBP14.46□□□□□ -0.09
C16orf62-212ENST00000540240 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
C16orf62-212ENST00000540240 C3orf67Q6ZVT6 689 aa14.45□□□□□ -0.1
C16orf62-212ENST00000540240 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
C16orf62-212ENST00000540240 SNPHO15079 494 aa14.4□□□□□ -0.1
C16orf62-212ENST00000540240 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
C16orf62-212ENST00000540240 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
C16orf62-212ENST00000540240 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
C16orf62-212ENST00000540240 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
C16orf62-212ENST00000540240 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
C16orf62-212ENST00000540240 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
C16orf62-212ENST00000540240 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
C16orf62-212ENST00000540240 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
C16orf62-212ENST00000540240 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
C16orf62-212ENST00000540240 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
C16orf62-212ENST00000540240 G3V3G9 751 aa14.24□□□□□ -0.13
C16orf62-212ENST00000540240 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
C16orf62-212ENST00000540240 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
C16orf62-212ENST00000540240 EMP3P54852 163 aa14.23□□□□□ -0.13
C16orf62-212ENST00000540240 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
C16orf62-212ENST00000540240 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
C16orf62-212ENST00000540240 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
C16orf62-212ENST00000540240 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
C16orf62-212ENST00000540240 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
C16orf62-212ENST00000540240 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
C16orf62-212ENST00000540240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
C16orf62-212ENST00000540240 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
C16orf62-212ENST00000540240 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
C16orf62-212ENST00000540240 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
C16orf62-212ENST00000540240 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
C16orf62-212ENST00000540240 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
C16orf62-212ENST00000540240 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
C16orf62-212ENST00000540240 MS4A4AQ96JQ5 239 aa14.16□□□□□ -0.14
C16orf62-212ENST00000540240 HS3ST6Q96QI5 342 aa14.15□□□□□ -0.14
C16orf62-212ENST00000540240 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
C16orf62-212ENST00000540240 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
C16orf62-212ENST00000540240 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
C16orf62-212ENST00000540240 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
C16orf62-212ENST00000540240 MICALL2Q8IY33 904 aa14.13□□□□□ -0.15
C16orf62-212ENST00000540240 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
C16orf62-212ENST00000540240 SOX12O15370 315 aa14.11□□□□□ -0.15
C16orf62-212ENST00000540240 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
C16orf62-212ENST00000540240 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
C16orf62-212ENST00000540240 KRTAP3-3Q9BYR6 98 aa14.1□□□□□ -0.15
C16orf62-212ENST00000540240 KRTAP3-2Q9BYR7 98 aa14.1□□□□□ -0.15
C16orf62-212ENST00000540240 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
C16orf62-212ENST00000540240 CHD1O14646 1710 aa14.07□□□□□ -0.16
C16orf62-212ENST00000540240 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
C16orf62-212ENST00000540240 HOXB1P14653 301 aaPredicted RBP14.05□□□□□ -0.16
C16orf62-212ENST00000540240 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
C16orf62-212ENST00000540240 SOGA1O94964 1423 aa14.05□□□□□ -0.16
C16orf62-212ENST00000540240 DOK7Q18PE1 504 aa14.03□□□□□ -0.16
C16orf62-212ENST00000540240 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
C16orf62-212ENST00000540240 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
C16orf62-212ENST00000540240 ARAP1Q96P48 1450 aa14□□□□□ -0.17
C16orf62-212ENST00000540240 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
C16orf62-212ENST00000540240 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
C16orf62-212ENST00000540240 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
C16orf62-212ENST00000540240 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
C16orf62-212ENST00000540240 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
C16orf62-212ENST00000540240 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
C16orf62-212ENST00000540240 ERBB3P21860 1342 aa13.95□□□□□ -0.18
C16orf62-212ENST00000540240 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
C16orf62-212ENST00000540240 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
C16orf62-212ENST00000540240 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
C16orf62-212ENST00000540240 NLRP6P59044 892 aa13.95□□□□□ -0.18
C16orf62-212ENST00000540240 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
C16orf62-212ENST00000540240 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
C16orf62-212ENST00000540240 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
C16orf62-212ENST00000540240 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
C16orf62-212ENST00000540240 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
C16orf62-212ENST00000540240 PKD2Q13563 968 aa13.92□□□□□ -0.18
C16orf62-212ENST00000540240 STK25O00506 426 aa13.91□□□□□ -0.18
C16orf62-212ENST00000540240 CUX1P39880 1505 aa13.9□□□□□ -0.18
C16orf62-212ENST00000540240 RGL2O15211 777 aa13.9□□□□□ -0.18
C16orf62-212ENST00000540240 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
C16orf62-212ENST00000540240 GPR153Q6NV75 609 aa13.9□□□□□ -0.18
C16orf62-212ENST00000540240 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
C16orf62-212ENST00000540240 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
C16orf62-212ENST00000540240 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
C16orf62-212ENST00000540240 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
C16orf62-212ENST00000540240 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
C16orf62-212ENST00000540240 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.19
C16orf62-212ENST00000540240 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
C16orf62-212ENST00000540240 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
C16orf62-212ENST00000540240 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
C16orf62-212ENST00000540240 KIF3CO14782 793 aa13.78□□□□□ -0.2
C16orf62-212ENST00000540240 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
C16orf62-212ENST00000540240 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
C16orf62-212ENST00000540240 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
C16orf62-212ENST00000540240 PPP1R37O75864 691 aa13.73□□□□□ -0.21
C16orf62-212ENST00000540240 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
C16orf62-212ENST00000540240 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
C16orf62-212ENST00000540240 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms