RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
C16orf62-212ENST00000540240 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
C16orf62-212ENST00000540240 SENP3Q9H4L4 574 aaPredicted RBP27.03■■□□□ 1.92
C16orf62-212ENST00000540240 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
C16orf62-212ENST00000540240 FOXD1Q16676 465 aa25.3■■□□□ 1.64
C16orf62-212ENST00000540240 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
C16orf62-212ENST00000540240 PPP6R1Q9UPN7 881 aa23.68■■□□□ 1.38
C16orf62-212ENST00000540240 PIAS4Q8N2W9 510 aaPredicted RBP23.59■■□□□ 1.37
C16orf62-212ENST00000540240 MSH5O43196 834 aa23.58■■□□□ 1.37
C16orf62-212ENST00000540240 ADRA2BP18089 450 aa23.58■■□□□ 1.37
C16orf62-212ENST00000540240 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
C16orf62-212ENST00000540240 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
C16orf62-212ENST00000540240 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
C16orf62-212ENST00000540240 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
C16orf62-212ENST00000540240 PPP4R3CPQ6ZMV5 832 aa21.07■□□□□ 0.96
C16orf62-212ENST00000540240 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
C16orf62-212ENST00000540240 CNKSR2Q8WXI2 1034 aa20.63■□□□□ 0.89
C16orf62-212ENST00000540240 DCAF8L1A6NGE4 600 aa20.62■□□□□ 0.89
C16orf62-212ENST00000540240 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
C16orf62-212ENST00000540240 CACNB1Q02641 598 aaPredicted RBP20.33■□□□□ 0.85
C16orf62-212ENST00000540240 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
C16orf62-212ENST00000540240 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
C16orf62-212ENST00000540240 NPM3O75607 178 aaKnown RBP19.97■□□□□ 0.79
C16orf62-212ENST00000540240 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
C16orf62-212ENST00000540240 C1QBPQ07021 282 aaKnown RBP19.82■□□□□ 0.76
C16orf62-212ENST00000540240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
C16orf62-212ENST00000540240 KCNA4P22459 653 aa19.57■□□□□ 0.72
C16orf62-212ENST00000540240 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
C16orf62-212ENST00000540240 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
C16orf62-212ENST00000540240 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
C16orf62-212ENST00000540240 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
C16orf62-212ENST00000540240 CAPN15O75808 1086 aa18.98■□□□□ 0.63
C16orf62-212ENST00000540240 DSG3P32926 999 aa18.9■□□□□ 0.62
C16orf62-212ENST00000540240 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
C16orf62-212ENST00000540240 ABCB7O75027 752 aa18.6■□□□□ 0.57
C16orf62-212ENST00000540240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
C16orf62-212ENST00000540240 APLP2Q06481 763 aa18.57■□□□□ 0.56
C16orf62-212ENST00000540240 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
C16orf62-212ENST00000540240 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
C16orf62-212ENST00000540240 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
C16orf62-212ENST00000540240 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
C16orf62-212ENST00000540240 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
C16orf62-212ENST00000540240 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
C16orf62-212ENST00000540240 POLA2Q14181 598 aa18.16■□□□□ 0.5
C16orf62-212ENST00000540240 POTEHQ6S545 545 aa18.16■□□□□ 0.5
C16orf62-212ENST00000540240 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
C16orf62-212ENST00000540240 ZBTB22O15209 634 aa18.04■□□□□ 0.48
C16orf62-212ENST00000540240 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
C16orf62-212ENST00000540240 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
C16orf62-212ENST00000540240 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
C16orf62-212ENST00000540240 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
C16orf62-212ENST00000540240 ATXN8OSP0DMR3 200 aa17.58■□□□□ 0.4
C16orf62-212ENST00000540240 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
C16orf62-212ENST00000540240 ABCC9O60706 1549 aa17.45■□□□□ 0.38
C16orf62-212ENST00000540240 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
C16orf62-212ENST00000540240 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
C16orf62-212ENST00000540240 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
C16orf62-212ENST00000540240 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
C16orf62-212ENST00000540240 FBLN2P98095 1184 aa17.25■□□□□ 0.35
C16orf62-212ENST00000540240 PIP4P2Q8N4L2 257 aa17.24■□□□□ 0.35
C16orf62-212ENST00000540240 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
C16orf62-212ENST00000540240 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
C16orf62-212ENST00000540240 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
C16orf62-212ENST00000540240 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
C16orf62-212ENST00000540240 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
C16orf62-212ENST00000540240 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
C16orf62-212ENST00000540240 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
C16orf62-212ENST00000540240 SSUH2Q9Y2M2 353 aa16.98■□□□□ 0.31
C16orf62-212ENST00000540240 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
C16orf62-212ENST00000540240 HAX1O00165 279 aa16.91■□□□□ 0.3
C16orf62-212ENST00000540240 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
C16orf62-212ENST00000540240 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
C16orf62-212ENST00000540240 EVX2Q03828 476 aa16.81■□□□□ 0.28
C16orf62-212ENST00000540240 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
C16orf62-212ENST00000540240 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
C16orf62-212ENST00000540240 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
C16orf62-212ENST00000540240 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
C16orf62-212ENST00000540240 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
C16orf62-212ENST00000540240 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
C16orf62-212ENST00000540240 NACADO15069 1562 aa16.46■□□□□ 0.23
C16orf62-212ENST00000540240 GABBR2O75899 941 aa16.35■□□□□ 0.21
C16orf62-212ENST00000540240 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
C16orf62-212ENST00000540240 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
C16orf62-212ENST00000540240 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
C16orf62-212ENST00000540240 CD44P16070 742 aaKnown RBP16.25■□□□□ 0.19
C16orf62-212ENST00000540240 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
C16orf62-212ENST00000540240 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
C16orf62-212ENST00000540240 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
C16orf62-212ENST00000540240 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
C16orf62-212ENST00000540240 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
C16orf62-212ENST00000540240 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
C16orf62-212ENST00000540240 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
C16orf62-212ENST00000540240 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
C16orf62-212ENST00000540240 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
C16orf62-212ENST00000540240 LHX8Q68G74 356 aa15.94■□□□□ 0.14
C16orf62-212ENST00000540240 PROM2Q8N271 834 aa15.94■□□□□ 0.14
C16orf62-212ENST00000540240 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
C16orf62-212ENST00000540240 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
C16orf62-212ENST00000540240 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
C16orf62-212ENST00000540240 CLCN6P51797 869 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms