RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
CCDC90B-204ENST00000525504 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
CCDC90B-204ENST00000525504 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CCDC90B-204ENST00000525504 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-204ENST00000525504 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-204ENST00000525504 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
CCDC90B-204ENST00000525504 PDCD7Q8N8D1 485 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-204ENST00000525504 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
CCDC90B-204ENST00000525504 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-204ENST00000525504 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC90B-204ENST00000525504 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CCDC90B-204ENST00000525504 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-204ENST00000525504 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
CCDC90B-204ENST00000525504 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.71
CCDC90B-204ENST00000525504 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
CCDC90B-204ENST00000525504 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-204ENST00000525504 CUX1P39880 1505 aa10.6□□□□□ -0.71
CCDC90B-204ENST00000525504 PRDM2Q13029 1718 aa10.59□□□□□ -0.71
CCDC90B-204ENST00000525504 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
CCDC90B-204ENST00000525504 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-204ENST00000525504 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
CCDC90B-204ENST00000525504 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-204ENST00000525504 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-204ENST00000525504 EIF4G3O43432 1585 aaKnown RBP10.55□□□□□ -0.72
CCDC90B-204ENST00000525504 HOXB3P14651 431 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-204ENST00000525504 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
CCDC90B-204ENST00000525504 GRIN2BQ13224 1484 aa10.54□□□□□ -0.72
CCDC90B-204ENST00000525504 PYGBP11216 843 aa10.53□□□□□ -0.72
CCDC90B-204ENST00000525504 PTGER2P43116 358 aa10.53□□□□□ -0.72
CCDC90B-204ENST00000525504 CYB5RLQ6IPT4 315 aa10.53□□□□□ -0.72
CCDC90B-204ENST00000525504 WRNQ14191 1432 aaPredicted RBP eCLIP10.52□□□□□ -0.73
CCDC90B-204ENST00000525504 GOLGA2Q08379 1002 aa10.52□□□□□ -0.73
CCDC90B-204ENST00000525504 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.73
CCDC90B-204ENST00000525504 ERBB3P21860 1342 aa10.52□□□□□ -0.73
CCDC90B-204ENST00000525504 SNAPC4Q5SXM2 1469 aa10.51□□□□□ -0.73
CCDC90B-204ENST00000525504 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-204ENST00000525504 ARHGEF11O15085 1522 aa10.51□□□□□ -0.73
CCDC90B-204ENST00000525504 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CCDC90B-204ENST00000525504 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
CCDC90B-204ENST00000525504 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
CCDC90B-204ENST00000525504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC90B-204ENST00000525504 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
CCDC90B-204ENST00000525504 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
CCDC90B-204ENST00000525504 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
CCDC90B-204ENST00000525504 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
CCDC90B-204ENST00000525504 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-204ENST00000525504 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
CCDC90B-204ENST00000525504 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
CCDC90B-204ENST00000525504 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
CCDC90B-204ENST00000525504 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
CCDC90B-204ENST00000525504 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-204ENST00000525504 ZNF687Q8N1G0 1237 aa10.42□□□□□ -0.74
CCDC90B-204ENST00000525504 CLASP1Q7Z460 1538 aa10.42□□□□□ -0.74
CCDC90B-204ENST00000525504 TOP2BQ02880 1626 aa10.41□□□□□ -0.74
CCDC90B-204ENST00000525504 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
CCDC90B-204ENST00000525504 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
CCDC90B-204ENST00000525504 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
CCDC90B-204ENST00000525504 NUP160Q12769 1436 aa10.4□□□□□ -0.75
CCDC90B-204ENST00000525504 G3V3G9 751 aa10.39□□□□□ -0.75
CCDC90B-204ENST00000525504 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
CCDC90B-204ENST00000525504 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
CCDC90B-204ENST00000525504 IGF1RP08069 1367 aa10.38□□□□□ -0.75
CCDC90B-204ENST00000525504 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
CCDC90B-204ENST00000525504 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
CCDC90B-204ENST00000525504 CHD1O14646 1710 aa10.36□□□□□ -0.75
CCDC90B-204ENST00000525504 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
CCDC90B-204ENST00000525504 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
CCDC90B-204ENST00000525504 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
CCDC90B-204ENST00000525504 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
CCDC90B-204ENST00000525504 PSEN1P49768 467 aa10.34□□□□□ -0.75
CCDC90B-204ENST00000525504 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CCDC90B-204ENST00000525504 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
CCDC90B-204ENST00000525504 GSE1Q14687 1217 aa10.31□□□□□ -0.76
CCDC90B-204ENST00000525504 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
CCDC90B-204ENST00000525504 CEP170Q5SW79 1584 aa10.27□□□□□ -0.76
CCDC90B-204ENST00000525504 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
CCDC90B-204ENST00000525504 PRG4Q92954 1404 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-204ENST00000525504 PBRM1Q86U86 1689 aa10.26□□□□□ -0.77
CCDC90B-204ENST00000525504 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
CCDC90B-204ENST00000525504 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-204ENST00000525504 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
CCDC90B-204ENST00000525504 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
CCDC90B-204ENST00000525504 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
CCDC90B-204ENST00000525504 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
CCDC90B-204ENST00000525504 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
CCDC90B-204ENST00000525504 LSM11P83369 360 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCDC90B-204ENST00000525504 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
CCDC90B-204ENST00000525504 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
CCDC90B-204ENST00000525504 PTPRGP23470 1445 aa10.16□□□□□ -0.78
CCDC90B-204ENST00000525504 RUSC2Q8N2Y8 1516 aa10.14□□□□□ -0.79
CCDC90B-204ENST00000525504 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
CCDC90B-204ENST00000525504 RAPGEF2Q9Y4G8 1499 aa10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 PBX2P40425 430 aa10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 CUL7Q14999 1698 aa10.12□□□□□ -0.79
CCDC90B-204ENST00000525504 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
CCDC90B-204ENST00000525504 ABCC10Q5T3U5 1492 aa10.1□□□□□ -0.79
CCDC90B-204ENST00000525504 PRXQ9BXM0 1461 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms