RNA–Protein interactions for RNA: ENST00000521343.1

TPM3P3-201, Transcript of tropomyosin 3 pseudogene 3, humanhuman

BASIC

Gene TPM3P3, Length 354 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P3-201ENST00000521343 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
TPM3P3-201ENST00000521343 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
TPM3P3-201ENST00000521343 PLCG2P16885 1265 aa9.65□□□□□ -0.86
TPM3P3-201ENST00000521343 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
TPM3P3-201ENST00000521343 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
TPM3P3-201ENST00000521343 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
TPM3P3-201ENST00000521343 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
TPM3P3-201ENST00000521343 CUX2O14529 1486 aa9.63□□□□□ -0.87
TPM3P3-201ENST00000521343 IGF1RP08069 1367 aa9.63□□□□□ -0.87
TPM3P3-201ENST00000521343 GOLGA3Q08378 1498 aa9.62□□□□□ -0.87
TPM3P3-201ENST00000521343 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
TPM3P3-201ENST00000521343 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
TPM3P3-201ENST00000521343 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
TPM3P3-201ENST00000521343 DNMBPQ6XZF7 1577 aa9.61□□□□□ -0.87
TPM3P3-201ENST00000521343 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
TPM3P3-201ENST00000521343 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
TPM3P3-201ENST00000521343 RIOK3O14730 519 aaKnown RBP9.59□□□□□ -0.87
TPM3P3-201ENST00000521343 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
TPM3P3-201ENST00000521343 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
TPM3P3-201ENST00000521343 CARMIL1Q5VZK9 1371 aa9.58□□□□□ -0.88
TPM3P3-201ENST00000521343 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
TPM3P3-201ENST00000521343 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
TPM3P3-201ENST00000521343 TDRD9Q8NDG6 1382 aaKnown RBP9.57□□□□□ -0.88
TPM3P3-201ENST00000521343 PRXQ9BXM0 1461 aa9.57□□□□□ -0.88
TPM3P3-201ENST00000521343 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
TPM3P3-201ENST00000521343 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
TPM3P3-201ENST00000521343 OCEL1Q9H607 264 aa9.56□□□□□ -0.88
TPM3P3-201ENST00000521343 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
TPM3P3-201ENST00000521343 RAPGEF2Q9Y4G8 1499 aa9.55□□□□□ -0.88
TPM3P3-201ENST00000521343 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
TPM3P3-201ENST00000521343 CDAN1Q8IWY9 1227 aa9.55□□□□□ -0.88
TPM3P3-201ENST00000521343 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
TPM3P3-201ENST00000521343 KIF21BO75037 1637 aa9.53□□□□□ -0.88
TPM3P3-201ENST00000521343 ST18O60284 1047 aa9.52□□□□□ -0.89
TPM3P3-201ENST00000521343 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
TPM3P3-201ENST00000521343 PCDHB8Q9UN66 801 aa9.52□□□□□ -0.89
TPM3P3-201ENST00000521343 SNPHO15079 494 aa9.51□□□□□ -0.89
TPM3P3-201ENST00000521343 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
TPM3P3-201ENST00000521343 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
TPM3P3-201ENST00000521343 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
TPM3P3-201ENST00000521343 CLIP1P30622 1438 aa9.5□□□□□ -0.89
TPM3P3-201ENST00000521343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.5□□□□□ -0.89
TPM3P3-201ENST00000521343 STK25O00506 426 aa9.5□□□□□ -0.89
TPM3P3-201ENST00000521343 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
TPM3P3-201ENST00000521343 ZFP91Q96JP5 570 aaPredicted RBP9.5□□□□□ -0.89
TPM3P3-201ENST00000521343 GAPVD1Q14C86 1478 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
TPM3P3-201ENST00000521343 IFT140Q96RY7 1462 aa9.48□□□□□ -0.89
TPM3P3-201ENST00000521343 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
TPM3P3-201ENST00000521343 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
TPM3P3-201ENST00000521343 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
TPM3P3-201ENST00000521343 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
TPM3P3-201ENST00000521343 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
TPM3P3-201ENST00000521343 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
TPM3P3-201ENST00000521343 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
TPM3P3-201ENST00000521343 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
TPM3P3-201ENST00000521343 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
TPM3P3-201ENST00000521343 WDR62O43379 1518 aa9.46□□□□□ -0.9
TPM3P3-201ENST00000521343 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
TPM3P3-201ENST00000521343 TMEM121BQ9BXQ6 578 aaPredicted RBP9.45□□□□□ -0.9
TPM3P3-201ENST00000521343 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
TPM3P3-201ENST00000521343 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
TPM3P3-201ENST00000521343 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 PDAP1Q13442 181 aaKnown RBP9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 TARBP1Q13395 1621 aaKnown RBP9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
TPM3P3-201ENST00000521343 PSEN1P49768 467 aa9.4□□□□□ -0.9
TPM3P3-201ENST00000521343 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
TPM3P3-201ENST00000521343 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
TPM3P3-201ENST00000521343 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
TPM3P3-201ENST00000521343 TTBK1Q5TCY1 1321 aaPredicted RBP9.38□□□□□ -0.91
TPM3P3-201ENST00000521343 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
TPM3P3-201ENST00000521343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM3P3-201ENST00000521343 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
TPM3P3-201ENST00000521343 ATP1B4Q9UN42 357 aaPredicted RBP9.36□□□□□ -0.91
TPM3P3-201ENST00000521343 CUL7Q14999 1698 aa9.36□□□□□ -0.91
TPM3P3-201ENST00000521343 THOC2Q8NI27 1593 aaKnown RBP9.35□□□□□ -0.91
TPM3P3-201ENST00000521343 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
TPM3P3-201ENST00000521343 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
TPM3P3-201ENST00000521343 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
TPM3P3-201ENST00000521343 DNAJC5Q9H3Z4 198 aa9.33□□□□□ -0.92
TPM3P3-201ENST00000521343 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
TPM3P3-201ENST00000521343 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
TPM3P3-201ENST00000521343 SNAPC4Q5SXM2 1469 aa9.33□□□□□ -0.92
TPM3P3-201ENST00000521343 G3V3G9 751 aa9.32□□□□□ -0.92
TPM3P3-201ENST00000521343 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
TPM3P3-201ENST00000521343 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
TPM3P3-201ENST00000521343 EMP3P54852 163 aa9.3□□□□□ -0.92
TPM3P3-201ENST00000521343 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
TPM3P3-201ENST00000521343 TSHZ2Q9NRE2 1034 aa9.3□□□□□ -0.92
TPM3P3-201ENST00000521343 JPH4Q96JJ6 628 aa9.29□□□□□ -0.92
TPM3P3-201ENST00000521343 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms