RNA–Protein interactions for RNA: ENST00000519524.1

POLB-206, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 655 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-206ENST00000519524 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
POLB-206ENST00000519524 VGFO15240 615 aaPredicted RBP15.34■□□□□ 0.05
POLB-206ENST00000519524 VSIG10Q8N0Z9 540 aa15.34■□□□□ 0.05
POLB-206ENST00000519524 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
POLB-206ENST00000519524 WDR62O43379 1518 aa15.33■□□□□ 0.05
POLB-206ENST00000519524 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
POLB-206ENST00000519524 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
POLB-206ENST00000519524 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
POLB-206ENST00000519524 TSHZ2Q9NRE2 1034 aa15.3■□□□□ 0.04
POLB-206ENST00000519524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.28■□□□□ 0.04
POLB-206ENST00000519524 ZFP91Q96JP5 570 aaPredicted RBP15.28■□□□□ 0.04
POLB-206ENST00000519524 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
POLB-206ENST00000519524 CFTRP13569 1480 aa15.27■□□□□ 0.03
POLB-206ENST00000519524 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
POLB-206ENST00000519524 STK25O00506 426 aa15.26■□□□□ 0.03
POLB-206ENST00000519524 TMEM121BQ9BXQ6 578 aaPredicted RBP15.26■□□□□ 0.03
POLB-206ENST00000519524 MAP3K13O43283 966 aa15.23■□□□□ 0.03
POLB-206ENST00000519524 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
POLB-206ENST00000519524 IER5LQ5T953 404 aa15.23■□□□□ 0.03
POLB-206ENST00000519524 BCL11BQ9C0K0 894 aaPredicted RBP15.22■□□□□ 0.03
POLB-206ENST00000519524 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
POLB-206ENST00000519524 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
POLB-206ENST00000519524 PCDHB13Q9Y5F0 798 aa15.17■□□□□ 0.02
POLB-206ENST00000519524 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
POLB-206ENST00000519524 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
POLB-206ENST00000519524 ZNF467Q7Z7K2 595 aaPredicted RBP15.16■□□□□ 0.02
POLB-206ENST00000519524 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
POLB-206ENST00000519524 MARVELD3Q96A59 401 aa15.14■□□□□ 0.01
POLB-206ENST00000519524 PDAP1Q13442 181 aaKnown RBP15.09■□□□□ 0.01
POLB-206ENST00000519524 IFNL1Q8IU54 200 aa15.08■□□□□ 0
POLB-206ENST00000519524 SNPHO15079 494 aa15.06■□□□□ 0
POLB-206ENST00000519524 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
POLB-206ENST00000519524 PRDM2Q13029 1718 aa15.06■□□□□ 0
POLB-206ENST00000519524 PSEN1P49768 467 aa15.04■□□□□ -0
POLB-206ENST00000519524 TOPBP1Q92547 1522 aa15.02■□□□□ -0
POLB-206ENST00000519524 PLCG2P16885 1265 aa15□□□□□ -0.01
POLB-206ENST00000519524 KRTAP3-3Q9BYR6 98 aa15□□□□□ -0.01
POLB-206ENST00000519524 KRTAP3-2Q9BYR7 98 aa15□□□□□ -0.01
POLB-206ENST00000519524 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
POLB-206ENST00000519524 BCANQ96GW7 911 aa14.97□□□□□ -0.01
POLB-206ENST00000519524 MFRPQ9BY79 579 aa14.94□□□□□ -0.02
POLB-206ENST00000519524 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
POLB-206ENST00000519524 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
POLB-206ENST00000519524 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.02
POLB-206ENST00000519524 EMP3P54852 163 aa14.91□□□□□ -0.02
POLB-206ENST00000519524 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
POLB-206ENST00000519524 RYDENQ9NUL5 291 aaKnown RBP14.91□□□□□ -0.02
POLB-206ENST00000519524 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
POLB-206ENST00000519524 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
POLB-206ENST00000519524 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
POLB-206ENST00000519524 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
POLB-206ENST00000519524 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
POLB-206ENST00000519524 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
POLB-206ENST00000519524 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.87□□□□□ -0.03
POLB-206ENST00000519524 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
POLB-206ENST00000519524 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
POLB-206ENST00000519524 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
POLB-206ENST00000519524 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
POLB-206ENST00000519524 HS3ST6Q96QI5 342 aa14.86□□□□□ -0.03
POLB-206ENST00000519524 FBXO22Q8NEZ5 403 aa14.85□□□□□ -0.03
POLB-206ENST00000519524 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
POLB-206ENST00000519524 CABP2Q9NPB3 220 aa14.84□□□□□ -0.03
POLB-206ENST00000519524 ARHGEF11O15085 1522 aa14.83□□□□□ -0.04
POLB-206ENST00000519524 CADPS2Q86UW7 1296 aa14.83□□□□□ -0.04
POLB-206ENST00000519524 TDRD9Q8NDG6 1382 aaKnown RBP14.81□□□□□ -0.04
POLB-206ENST00000519524 PPP1R37O75864 691 aa14.8□□□□□ -0.04
POLB-206ENST00000519524 OCEL1Q9H607 264 aa14.8□□□□□ -0.04
POLB-206ENST00000519524 CHD1O14646 1710 aa14.8□□□□□ -0.04
POLB-206ENST00000519524 FAM205CA6NFA0 338 aa14.79□□□□□ -0.04
POLB-206ENST00000519524 CUX1P39880 1505 aa14.78□□□□□ -0.04
POLB-206ENST00000519524 FGD5Q6ZNL6 1462 aa14.78□□□□□ -0.04
POLB-206ENST00000519524 SOGA1O94964 1423 aa14.78□□□□□ -0.04
POLB-206ENST00000519524 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
POLB-206ENST00000519524 SOX12O15370 315 aa14.77□□□□□ -0.05
POLB-206ENST00000519524 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
POLB-206ENST00000519524 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
POLB-206ENST00000519524 CYB5RLQ6IPT4 315 aa14.74□□□□□ -0.05
POLB-206ENST00000519524 MS4A4AQ96JQ5 239 aa14.73□□□□□ -0.05
POLB-206ENST00000519524 NLRP6P59044 892 aa14.72□□□□□ -0.05
POLB-206ENST00000519524 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
POLB-206ENST00000519524 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
POLB-206ENST00000519524 RNF166Q96A37 237 aaPredicted RBP14.66□□□□□ -0.06
POLB-206ENST00000519524 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
POLB-206ENST00000519524 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
POLB-206ENST00000519524 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
POLB-206ENST00000519524 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
POLB-206ENST00000519524 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
POLB-206ENST00000519524 ILDR1Q86SU0 546 aaPredicted RBP14.61□□□□□ -0.07
POLB-206ENST00000519524 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
POLB-206ENST00000519524 SYNJ2O15056 1496 aa14.59□□□□□ -0.07
POLB-206ENST00000519524 C3orf67Q6ZVT6 689 aa14.59□□□□□ -0.07
POLB-206ENST00000519524 PBRM1Q86U86 1689 aa14.58□□□□□ -0.07
POLB-206ENST00000519524 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
POLB-206ENST00000519524 ABCA10Q8WWZ4 1543 aa14.57□□□□□ -0.08
POLB-206ENST00000519524 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
POLB-206ENST00000519524 NBR1Q14596 966 aa14.57□□□□□ -0.08
POLB-206ENST00000519524 KCNV2Q8TDN2 545 aa14.55□□□□□ -0.08
POLB-206ENST00000519524 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
POLB-206ENST00000519524 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
POLB-206ENST00000519524 GOLGA2Q08379 1002 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms