RNA–Protein interactions for RNA: ENST00000519524.1

POLB-206, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 655 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-206ENST00000519524 AEBP2Q6ZN18 517 aaPredicted RBP33.3■■■□□ 2.92
POLB-206ENST00000519524 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.56
POLB-206ENST00000519524 SENP3Q9H4L4 574 aaPredicted RBP28.57■■■□□ 2.16
POLB-206ENST00000519524 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
POLB-206ENST00000519524 POTEDQ86YR6 584 aa27.01■■□□□ 1.91
POLB-206ENST00000519524 FOXD1Q16676 465 aa26.8■■□□□ 1.88
POLB-206ENST00000519524 MSH5O43196 834 aa25.53■■□□□ 1.68
POLB-206ENST00000519524 PIAS4Q8N2W9 510 aaPredicted RBP24.73■■□□□ 1.55
POLB-206ENST00000519524 PPP6R1Q9UPN7 881 aa24.12■■□□□ 1.45
POLB-206ENST00000519524 ADRA2BP18089 450 aa23.97■■□□□ 1.43
POLB-206ENST00000519524 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
POLB-206ENST00000519524 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
POLB-206ENST00000519524 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
POLB-206ENST00000519524 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
POLB-206ENST00000519524 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
POLB-206ENST00000519524 RNF39Q9H2S5 420 aa21.69■■□□□ 1.06
POLB-206ENST00000519524 DCAF8L1A6NGE4 600 aa21.6■■□□□ 1.05
POLB-206ENST00000519524 C1QBPQ07021 282 aaKnown RBP21.29■■□□□ 1
POLB-206ENST00000519524 HOXD11P31277 338 aaPredicted RBP21.17■□□□□ 0.98
POLB-206ENST00000519524 KCNA4P22459 653 aa21.11■□□□□ 0.97
POLB-206ENST00000519524 PPP4R3CPQ6ZMV5 832 aa20.93■□□□□ 0.94
POLB-206ENST00000519524 POTEHQ6S545 545 aa20.92■□□□□ 0.94
POLB-206ENST00000519524 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
POLB-206ENST00000519524 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
POLB-206ENST00000519524 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
POLB-206ENST00000519524 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
POLB-206ENST00000519524 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
POLB-206ENST00000519524 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
POLB-206ENST00000519524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
POLB-206ENST00000519524 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
POLB-206ENST00000519524 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
POLB-206ENST00000519524 DSG3P32926 999 aa19.9■□□□□ 0.78
POLB-206ENST00000519524 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
POLB-206ENST00000519524 CAPN15O75808 1086 aa19.71■□□□□ 0.75
POLB-206ENST00000519524 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
POLB-206ENST00000519524 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
POLB-206ENST00000519524 ZBTB22O15209 634 aa19.52■□□□□ 0.72
POLB-206ENST00000519524 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
POLB-206ENST00000519524 ABCB7O75027 752 aa19.15■□□□□ 0.66
POLB-206ENST00000519524 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
POLB-206ENST00000519524 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
POLB-206ENST00000519524 CHRDL2Q6WN34 429 aa19.08■□□□□ 0.64
POLB-206ENST00000519524 SP7Q8TDD2 431 aaPredicted RBP19.04■□□□□ 0.64
POLB-206ENST00000519524 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
POLB-206ENST00000519524 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
POLB-206ENST00000519524 APLP2Q06481 763 aa18.9■□□□□ 0.62
POLB-206ENST00000519524 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
POLB-206ENST00000519524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
POLB-206ENST00000519524 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
POLB-206ENST00000519524 ATXN8OSP0DMR3 200 aa18.45■□□□□ 0.54
POLB-206ENST00000519524 SAMD1Q6SPF0 538 aaPredicted RBP18.45■□□□□ 0.54
POLB-206ENST00000519524 ABCC9O60706 1549 aa18.38■□□□□ 0.53
POLB-206ENST00000519524 PIP4P2Q8N4L2 257 aa18.37■□□□□ 0.53
POLB-206ENST00000519524 HAX1O00165 279 aa18.36■□□□□ 0.53
POLB-206ENST00000519524 POLA2Q14181 598 aa18.31■□□□□ 0.52
POLB-206ENST00000519524 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
POLB-206ENST00000519524 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
POLB-206ENST00000519524 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
POLB-206ENST00000519524 REM2Q8IYK8 340 aaPredicted RBP18.15■□□□□ 0.5
POLB-206ENST00000519524 FXR2P51116 673 aaKnown RBP eCLIP18.06■□□□□ 0.48
POLB-206ENST00000519524 EVX2Q03828 476 aa18.06■□□□□ 0.48
POLB-206ENST00000519524 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
POLB-206ENST00000519524 LHX8Q68G74 356 aa17.83■□□□□ 0.44
POLB-206ENST00000519524 ZBTB12Q9Y330 459 aaPredicted RBP17.83■□□□□ 0.44
POLB-206ENST00000519524 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
POLB-206ENST00000519524 FKBP8Q14318 412 aa17.74■□□□□ 0.43
POLB-206ENST00000519524 PLSCR2Q9NRY7 297 aa17.72■□□□□ 0.43
POLB-206ENST00000519524 GABBR2O75899 941 aa17.57■□□□□ 0.4
POLB-206ENST00000519524 C19orf67A6NJJ6 358 aa17.53■□□□□ 0.4
POLB-206ENST00000519524 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
POLB-206ENST00000519524 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
POLB-206ENST00000519524 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
POLB-206ENST00000519524 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
POLB-206ENST00000519524 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
POLB-206ENST00000519524 NACADO15069 1562 aa17.21■□□□□ 0.35
POLB-206ENST00000519524 POTEIP0CG38 1075 aa17.21■□□□□ 0.35
POLB-206ENST00000519524 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
POLB-206ENST00000519524 FBLN2P98095 1184 aa17.2■□□□□ 0.34
POLB-206ENST00000519524 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
POLB-206ENST00000519524 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
POLB-206ENST00000519524 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
POLB-206ENST00000519524 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
POLB-206ENST00000519524 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
POLB-206ENST00000519524 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
POLB-206ENST00000519524 PROM2Q8N271 834 aa17.14■□□□□ 0.33
POLB-206ENST00000519524 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
POLB-206ENST00000519524 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
POLB-206ENST00000519524 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
POLB-206ENST00000519524 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
POLB-206ENST00000519524 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
POLB-206ENST00000519524 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
POLB-206ENST00000519524 POTEMA6NI47 508 aa16.87■□□□□ 0.29
POLB-206ENST00000519524 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
POLB-206ENST00000519524 CLCN6P51797 869 aa16.86■□□□□ 0.29
POLB-206ENST00000519524 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
POLB-206ENST00000519524 DCBLD2Q96PD2 775 aa16.83■□□□□ 0.28
POLB-206ENST00000519524 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
POLB-206ENST00000519524 OTUD5Q96G74 571 aa16.79■□□□□ 0.28
POLB-206ENST00000519524 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
POLB-206ENST00000519524 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms