RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
SH3TC2-215ENST00000515425 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
SH3TC2-215ENST00000515425 PKD2Q13563 968 aa13.66□□□□□ -0.22
SH3TC2-215ENST00000515425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
SH3TC2-215ENST00000515425 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
SH3TC2-215ENST00000515425 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
SH3TC2-215ENST00000515425 NAIPQ13075 1403 aa13.64□□□□□ -0.23
SH3TC2-215ENST00000515425 EFCAB5A4FU69 1503 aa13.64□□□□□ -0.23
SH3TC2-215ENST00000515425 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
SH3TC2-215ENST00000515425 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
SH3TC2-215ENST00000515425 CCDC7Q96M83 1385 aa13.62□□□□□ -0.23
SH3TC2-215ENST00000515425 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
SH3TC2-215ENST00000515425 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
SH3TC2-215ENST00000515425 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
SH3TC2-215ENST00000515425 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
SH3TC2-215ENST00000515425 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
SH3TC2-215ENST00000515425 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
SH3TC2-215ENST00000515425 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
SH3TC2-215ENST00000515425 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
SH3TC2-215ENST00000515425 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
SH3TC2-215ENST00000515425 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
SH3TC2-215ENST00000515425 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
SH3TC2-215ENST00000515425 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
SH3TC2-215ENST00000515425 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
SH3TC2-215ENST00000515425 MSH5O43196 834 aa13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 NUP155O75694 1391 aa13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 PTPRGP23470 1445 aa13.54□□□□□ -0.24
SH3TC2-215ENST00000515425 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
SH3TC2-215ENST00000515425 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.24
SH3TC2-215ENST00000515425 USP47Q96K76 1375 aa13.52□□□□□ -0.25
SH3TC2-215ENST00000515425 PTPN23Q9H3S7 1636 aa13.52□□□□□ -0.25
SH3TC2-215ENST00000515425 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
SH3TC2-215ENST00000515425 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
SH3TC2-215ENST00000515425 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
SH3TC2-215ENST00000515425 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
SH3TC2-215ENST00000515425 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
SH3TC2-215ENST00000515425 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
SH3TC2-215ENST00000515425 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
SH3TC2-215ENST00000515425 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
SH3TC2-215ENST00000515425 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
SH3TC2-215ENST00000515425 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
SH3TC2-215ENST00000515425 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-215ENST00000515425 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-215ENST00000515425 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
SH3TC2-215ENST00000515425 CUL7Q14999 1698 aa13.46□□□□□ -0.25
SH3TC2-215ENST00000515425 GRIN2AQ12879 1464 aa13.46□□□□□ -0.26
SH3TC2-215ENST00000515425 RALBP1Q15311 655 aa13.45□□□□□ -0.26
SH3TC2-215ENST00000515425 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
SH3TC2-215ENST00000515425 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
SH3TC2-215ENST00000515425 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
SH3TC2-215ENST00000515425 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SH3TC2-215ENST00000515425 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
SH3TC2-215ENST00000515425 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
SH3TC2-215ENST00000515425 ANKRD30BQ9BXX2 1392 aa13.43□□□□□ -0.26
SH3TC2-215ENST00000515425 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
SH3TC2-215ENST00000515425 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
SH3TC2-215ENST00000515425 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
SH3TC2-215ENST00000515425 KIAA0586Q9BVV6 1533 aa13.42□□□□□ -0.26
SH3TC2-215ENST00000515425 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
SH3TC2-215ENST00000515425 DAPK1P53355 1430 aa13.42□□□□□ -0.26
SH3TC2-215ENST00000515425 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 NCOA1Q15788 1441 aa13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 NEFMP07197 916 aa13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
SH3TC2-215ENST00000515425 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
SH3TC2-215ENST00000515425 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
SH3TC2-215ENST00000515425 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
SH3TC2-215ENST00000515425 TMF1P82094 1093 aa13.39□□□□□ -0.27
SH3TC2-215ENST00000515425 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
SH3TC2-215ENST00000515425 PLIN1O60240 522 aa13.38□□□□□ -0.27
SH3TC2-215ENST00000515425 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
SH3TC2-215ENST00000515425 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
SH3TC2-215ENST00000515425 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
SH3TC2-215ENST00000515425 ABCC5O15440 1437 aa13.37□□□□□ -0.27
SH3TC2-215ENST00000515425 WDR62O43379 1518 aa13.37□□□□□ -0.27
SH3TC2-215ENST00000515425 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
SH3TC2-215ENST00000515425 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
SH3TC2-215ENST00000515425 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
SH3TC2-215ENST00000515425 RGS3P49796 1198 aa13.36□□□□□ -0.27
SH3TC2-215ENST00000515425 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 CTTNBP2Q8WZ74 1663 aa13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
SH3TC2-215ENST00000515425 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 PDE4AP27815 886 aa13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 PANK3Q9H999 370 aa13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
SH3TC2-215ENST00000515425 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
SH3TC2-215ENST00000515425 MLECQ14165 292 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms