RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
SH3TC2-215ENST00000515425 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
SH3TC2-215ENST00000515425 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
SH3TC2-215ENST00000515425 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
SH3TC2-215ENST00000515425 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
SH3TC2-215ENST00000515425 ABCC9O60706 1549 aa16.55■□□□□ 0.24
SH3TC2-215ENST00000515425 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
SH3TC2-215ENST00000515425 HRCP23327 699 aa16.43■□□□□ 0.22
SH3TC2-215ENST00000515425 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
SH3TC2-215ENST00000515425 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
SH3TC2-215ENST00000515425 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
SH3TC2-215ENST00000515425 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
SH3TC2-215ENST00000515425 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
SH3TC2-215ENST00000515425 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
SH3TC2-215ENST00000515425 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
SH3TC2-215ENST00000515425 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
SH3TC2-215ENST00000515425 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
SH3TC2-215ENST00000515425 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
SH3TC2-215ENST00000515425 ZEB1P37275 1124 aaPredicted RBP15.93■□□□□ 0.14
SH3TC2-215ENST00000515425 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
SH3TC2-215ENST00000515425 TTBK1Q5TCY1 1321 aaPredicted RBP15.85■□□□□ 0.13
SH3TC2-215ENST00000515425 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
SH3TC2-215ENST00000515425 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
SH3TC2-215ENST00000515425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
SH3TC2-215ENST00000515425 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
SH3TC2-215ENST00000515425 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
SH3TC2-215ENST00000515425 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
SH3TC2-215ENST00000515425 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
SH3TC2-215ENST00000515425 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
SH3TC2-215ENST00000515425 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
SH3TC2-215ENST00000515425 NACADO15069 1562 aa15.44■□□□□ 0.06
SH3TC2-215ENST00000515425 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
SH3TC2-215ENST00000515425 APLP2Q06481 763 aa15.44■□□□□ 0.06
SH3TC2-215ENST00000515425 YTHDC1Q96MU7 727 aaKnown RBP15.33■□□□□ 0.05
SH3TC2-215ENST00000515425 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
SH3TC2-215ENST00000515425 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.03
SH3TC2-215ENST00000515425 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
SH3TC2-215ENST00000515425 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
SH3TC2-215ENST00000515425 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
SH3TC2-215ENST00000515425 GTF3C3Q9Y5Q9 886 aa15.17■□□□□ 0.02
SH3TC2-215ENST00000515425 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
SH3TC2-215ENST00000515425 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
SH3TC2-215ENST00000515425 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
SH3TC2-215ENST00000515425 WIZO95785 1651 aa15.02□□□□□ -0.01
SH3TC2-215ENST00000515425 CEP162Q5TB80 1403 aa14.99□□□□□ -0.01
SH3TC2-215ENST00000515425 ITGAEP38570 1179 aa14.97□□□□□ -0.01
SH3TC2-215ENST00000515425 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
SH3TC2-215ENST00000515425 ATP1B4Q9UN42 357 aaPredicted RBP14.92□□□□□ -0.02
SH3TC2-215ENST00000515425 SOGA1O94964 1423 aa14.9□□□□□ -0.02
SH3TC2-215ENST00000515425 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
SH3TC2-215ENST00000515425 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
SH3TC2-215ENST00000515425 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
SH3TC2-215ENST00000515425 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
SH3TC2-215ENST00000515425 MIER1Q8N108 512 aa14.83□□□□□ -0.03
SH3TC2-215ENST00000515425 EEA1Q15075 1411 aa14.81□□□□□ -0.04
SH3TC2-215ENST00000515425 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
SH3TC2-215ENST00000515425 MYT1Q01538 1121 aa14.8□□□□□ -0.04
SH3TC2-215ENST00000515425 CLIP1P30622 1438 aa14.79□□□□□ -0.04
SH3TC2-215ENST00000515425 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
SH3TC2-215ENST00000515425 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
SH3TC2-215ENST00000515425 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
SH3TC2-215ENST00000515425 SMARCA4P51532 1647 aa14.77□□□□□ -0.04
SH3TC2-215ENST00000515425 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
SH3TC2-215ENST00000515425 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
SH3TC2-215ENST00000515425 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
SH3TC2-215ENST00000515425 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
SH3TC2-215ENST00000515425 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
SH3TC2-215ENST00000515425 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
SH3TC2-215ENST00000515425 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
SH3TC2-215ENST00000515425 NEFLP07196 543 aa14.63□□□□□ -0.07
SH3TC2-215ENST00000515425 FBLN2P98095 1184 aa14.59□□□□□ -0.07
SH3TC2-215ENST00000515425 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
SH3TC2-215ENST00000515425 BCANQ96GW7 911 aa14.58□□□□□ -0.08
SH3TC2-215ENST00000515425 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
SH3TC2-215ENST00000515425 VPS8Q8N3P4 1428 aa14.56□□□□□ -0.08
SH3TC2-215ENST00000515425 ARID3CA6NKF2 412 aa14.54□□□□□ -0.08
SH3TC2-215ENST00000515425 KANK4Q5T7N3 995 aaPredicted RBP14.49□□□□□ -0.09
SH3TC2-215ENST00000515425 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
SH3TC2-215ENST00000515425 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
SH3TC2-215ENST00000515425 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
SH3TC2-215ENST00000515425 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
SH3TC2-215ENST00000515425 ANP32CO43423 234 aa14.41□□□□□ -0.1
SH3TC2-215ENST00000515425 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
SH3TC2-215ENST00000515425 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
SH3TC2-215ENST00000515425 NESP48681 1621 aa14.4□□□□□ -0.1
SH3TC2-215ENST00000515425 FKBP8Q14318 412 aa14.39□□□□□ -0.11
SH3TC2-215ENST00000515425 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
SH3TC2-215ENST00000515425 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
SH3TC2-215ENST00000515425 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
SH3TC2-215ENST00000515425 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
SH3TC2-215ENST00000515425 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
SH3TC2-215ENST00000515425 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
SH3TC2-215ENST00000515425 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
SH3TC2-215ENST00000515425 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
SH3TC2-215ENST00000515425 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
SH3TC2-215ENST00000515425 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.11
SH3TC2-215ENST00000515425 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
SH3TC2-215ENST00000515425 CUX2O14529 1486 aa14.31□□□□□ -0.12
SH3TC2-215ENST00000515425 KIF21BO75037 1637 aa14.29□□□□□ -0.12
SH3TC2-215ENST00000515425 POLR3GLQ9BT43 218 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms