RNA–Protein interactions for RNA: ENST00000515212.1

HMGN1P9-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene, humanhuman

BASIC

Gene HMGN1P9, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P9-201ENST00000515212 UBTFP17480 764 aaKnown RBP8.54□□□□□ -1.04
HMGN1P9-201ENST00000515212 PCGF6Q9BYE7 350 aa8.54□□□□□ -1.04
HMGN1P9-201ENST00000515212 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
HMGN1P9-201ENST00000515212 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
HMGN1P9-201ENST00000515212 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P9-201ENST00000515212 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
HMGN1P9-201ENST00000515212 KIF21BO75037 1637 aa8.53□□□□□ -1.04
HMGN1P9-201ENST00000515212 FANCD2Q9BXW9 1451 aa8.52□□□□□ -1.05
HMGN1P9-201ENST00000515212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGN1P9-201ENST00000515212 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P9-201ENST00000515212 NESP48681 1621 aa8.51□□□□□ -1.05
HMGN1P9-201ENST00000515212 CEP162Q5TB80 1403 aa8.5□□□□□ -1.05
HMGN1P9-201ENST00000515212 EFCAB3Q8N7B9 438 aa8.5□□□□□ -1.05
HMGN1P9-201ENST00000515212 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P9-201ENST00000515212 LAMC3Q9Y6N6 1575 aa8.5□□□□□ -1.05
HMGN1P9-201ENST00000515212 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P9-201ENST00000515212 MAMSTRQ6ZN01 415 aa8.49□□□□□ -1.05
HMGN1P9-201ENST00000515212 KIF27Q86VH2 1401 aa8.48□□□□□ -1.05
HMGN1P9-201ENST00000515212 POTEFA5A3E0 1075 aa8.48□□□□□ -1.05
HMGN1P9-201ENST00000515212 G3V3G9 751 aa8.48□□□□□ -1.05
HMGN1P9-201ENST00000515212 SOX12O15370 315 aa8.48□□□□□ -1.05
HMGN1P9-201ENST00000515212 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
HMGN1P9-201ENST00000515212 POTEB2H3BUK9 544 aa8.47□□□□□ -1.05
HMGN1P9-201ENST00000515212 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
HMGN1P9-201ENST00000515212 SCUBE2Q9NQ36 999 aa8.47□□□□□ -1.05
HMGN1P9-201ENST00000515212 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
HMGN1P9-201ENST00000515212 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
HMGN1P9-201ENST00000515212 RTN4Q9NQC3 1192 aaKnown RBP8.46□□□□□ -1.06
HMGN1P9-201ENST00000515212 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
HMGN1P9-201ENST00000515212 CUX2O14529 1486 aa8.45□□□□□ -1.06
HMGN1P9-201ENST00000515212 PDS5BQ9NTI5 1447 aa8.44□□□□□ -1.06
HMGN1P9-201ENST00000515212 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
HMGN1P9-201ENST00000515212 TOPBP1Q92547 1522 aa8.44□□□□□ -1.06
HMGN1P9-201ENST00000515212 NLRP6P59044 892 aa8.43□□□□□ -1.06
HMGN1P9-201ENST00000515212 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
HMGN1P9-201ENST00000515212 PRXQ9BXM0 1461 aa8.43□□□□□ -1.06
HMGN1P9-201ENST00000515212 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
HMGN1P9-201ENST00000515212 PDCD7Q8N8D1 485 aaKnown RBP8.42□□□□□ -1.06
HMGN1P9-201ENST00000515212 CLIP1P30622 1438 aa8.42□□□□□ -1.06
HMGN1P9-201ENST00000515212 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
HMGN1P9-201ENST00000515212 PHF8Q9UPP1 1060 aa8.41□□□□□ -1.06
HMGN1P9-201ENST00000515212 POLA1P09884 1462 aaPredicted RBP8.4□□□□□ -1.06
HMGN1P9-201ENST00000515212 RANGAP1P46060 587 aaPredicted RBP8.4□□□□□ -1.06
HMGN1P9-201ENST00000515212 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
HMGN1P9-201ENST00000515212 RAD54L2Q9Y4B4 1467 aa8.39□□□□□ -1.07
HMGN1P9-201ENST00000515212 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
HMGN1P9-201ENST00000515212 ILDR1Q86SU0 546 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P9-201ENST00000515212 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
HMGN1P9-201ENST00000515212 POTEJP0CG39 1038 aa8.38□□□□□ -1.07
HMGN1P9-201ENST00000515212 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
HMGN1P9-201ENST00000515212 ABCA10Q8WWZ4 1543 aa8.38□□□□□ -1.07
HMGN1P9-201ENST00000515212 IGF1RP08069 1367 aa8.37□□□□□ -1.07
HMGN1P9-201ENST00000515212 HRCP23327 699 aa8.37□□□□□ -1.07
HMGN1P9-201ENST00000515212 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
HMGN1P9-201ENST00000515212 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
HMGN1P9-201ENST00000515212 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
HMGN1P9-201ENST00000515212 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
HMGN1P9-201ENST00000515212 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
HMGN1P9-201ENST00000515212 TTBK1Q5TCY1 1321 aaPredicted RBP8.35□□□□□ -1.07
HMGN1P9-201ENST00000515212 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
HMGN1P9-201ENST00000515212 VPS8Q8N3P4 1428 aa8.35□□□□□ -1.07
HMGN1P9-201ENST00000515212 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
HMGN1P9-201ENST00000515212 MRC2Q9UBG0 1479 aa8.33□□□□□ -1.08
HMGN1P9-201ENST00000515212 FBXO22Q8NEZ5 403 aa8.33□□□□□ -1.08
HMGN1P9-201ENST00000515212 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
HMGN1P9-201ENST00000515212 CUL7Q14999 1698 aa8.32□□□□□ -1.08
HMGN1P9-201ENST00000515212 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
HMGN1P9-201ENST00000515212 ARAP1Q96P48 1450 aa8.31□□□□□ -1.08
HMGN1P9-201ENST00000515212 ABCA5Q8WWZ7 1642 aa8.3□□□□□ -1.08
HMGN1P9-201ENST00000515212 TDRD9Q8NDG6 1382 aaKnown RBP8.3□□□□□ -1.08
HMGN1P9-201ENST00000515212 GAPVD1Q14C86 1478 aa8.3□□□□□ -1.08
HMGN1P9-201ENST00000515212 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
HMGN1P9-201ENST00000515212 ERCC6Q03468 1493 aa8.29□□□□□ -1.08
HMGN1P9-201ENST00000515212 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
HMGN1P9-201ENST00000515212 ARHGAP35Q9NRY4 1499 aa8.28□□□□□ -1.08
HMGN1P9-201ENST00000515212 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P9-201ENST00000515212 CTTNBP2Q8WZ74 1663 aa8.27□□□□□ -1.09
HMGN1P9-201ENST00000515212 WDR62O43379 1518 aa8.26□□□□□ -1.09
HMGN1P9-201ENST00000515212 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P9-201ENST00000515212 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P9-201ENST00000515212 PBRM1Q86U86 1689 aa8.26□□□□□ -1.09
HMGN1P9-201ENST00000515212 SNPHO15079 494 aa8.25□□□□□ -1.09
HMGN1P9-201ENST00000515212 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
HMGN1P9-201ENST00000515212 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
HMGN1P9-201ENST00000515212 ZEB1P37275 1124 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P9-201ENST00000515212 AQRO60306 1485 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGN1P9-201ENST00000515212 PPP1R37O75864 691 aa8.22□□□□□ -1.09
HMGN1P9-201ENST00000515212 THOC2Q8NI27 1593 aaKnown RBP8.22□□□□□ -1.09
HMGN1P9-201ENST00000515212 GRIN2BQ13224 1484 aa8.21□□□□□ -1.09
HMGN1P9-201ENST00000515212 EFCAB5A4FU69 1503 aa8.21□□□□□ -1.1
HMGN1P9-201ENST00000515212 P3H3Q8IVL6 736 aa8.21□□□□□ -1.1
HMGN1P9-201ENST00000515212 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P9-201ENST00000515212 ADAMTS12P58397 1594 aa8.2□□□□□ -1.1
HMGN1P9-201ENST00000515212 GTPBP6O43824 516 aaPredicted RBP8.2□□□□□ -1.1
HMGN1P9-201ENST00000515212 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
HMGN1P9-201ENST00000515212 ZNF608Q9ULD9 1512 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P9-201ENST00000515212 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
HMGN1P9-201ENST00000515212 FHOD3Q2V2M9 1422 aa8.19□□□□□ -1.1
HMGN1P9-201ENST00000515212 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P9-201ENST00000515212 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms