RNA–Protein interactions for RNA: ENST00000512554.1

GCSHP1-201, Transcript of glycine cleavage system protein H pseudogene 1, humanhuman

BASIC

Gene GCSHP1, Length 484 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP1-201ENST00000512554 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
GCSHP1-201ENST00000512554 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
GCSHP1-201ENST00000512554 SCUBE2Q9NQ36 999 aa12.24□□□□□ -0.45
GCSHP1-201ENST00000512554 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
GCSHP1-201ENST00000512554 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
GCSHP1-201ENST00000512554 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
GCSHP1-201ENST00000512554 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
GCSHP1-201ENST00000512554 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
GCSHP1-201ENST00000512554 CUX2O14529 1486 aa12.21□□□□□ -0.46
GCSHP1-201ENST00000512554 PLCG2P16885 1265 aa12.2□□□□□ -0.46
GCSHP1-201ENST00000512554 PSEN1P49768 467 aa12.2□□□□□ -0.46
GCSHP1-201ENST00000512554 IGF1RP08069 1367 aa12.19□□□□□ -0.46
GCSHP1-201ENST00000512554 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
GCSHP1-201ENST00000512554 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
GCSHP1-201ENST00000512554 ERCC6Q03468 1493 aa12.18□□□□□ -0.46
GCSHP1-201ENST00000512554 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
GCSHP1-201ENST00000512554 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
GCSHP1-201ENST00000512554 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
GCSHP1-201ENST00000512554 IFT140Q96RY7 1462 aa12.17□□□□□ -0.46
GCSHP1-201ENST00000512554 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
GCSHP1-201ENST00000512554 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
GCSHP1-201ENST00000512554 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
GCSHP1-201ENST00000512554 CUL7Q14999 1698 aa12.13□□□□□ -0.47
GCSHP1-201ENST00000512554 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
GCSHP1-201ENST00000512554 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
GCSHP1-201ENST00000512554 POTEMA6NI47 508 aa12.11□□□□□ -0.47
GCSHP1-201ENST00000512554 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
GCSHP1-201ENST00000512554 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
GCSHP1-201ENST00000512554 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
GCSHP1-201ENST00000512554 CARMIL1Q5VZK9 1371 aa12.09□□□□□ -0.47
GCSHP1-201ENST00000512554 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
GCSHP1-201ENST00000512554 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
GCSHP1-201ENST00000512554 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
GCSHP1-201ENST00000512554 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
GCSHP1-201ENST00000512554 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
GCSHP1-201ENST00000512554 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
GCSHP1-201ENST00000512554 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
GCSHP1-201ENST00000512554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.48
GCSHP1-201ENST00000512554 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
GCSHP1-201ENST00000512554 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
GCSHP1-201ENST00000512554 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
GCSHP1-201ENST00000512554 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
GCSHP1-201ENST00000512554 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
GCSHP1-201ENST00000512554 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
GCSHP1-201ENST00000512554 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
GCSHP1-201ENST00000512554 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
GCSHP1-201ENST00000512554 ADAMTS12P58397 1594 aa12□□□□□ -0.49
GCSHP1-201ENST00000512554 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
GCSHP1-201ENST00000512554 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
GCSHP1-201ENST00000512554 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
GCSHP1-201ENST00000512554 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
GCSHP1-201ENST00000512554 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
GCSHP1-201ENST00000512554 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
GCSHP1-201ENST00000512554 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
GCSHP1-201ENST00000512554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
GCSHP1-201ENST00000512554 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
GCSHP1-201ENST00000512554 CLIP1P30622 1438 aa11.94□□□□□ -0.5
GCSHP1-201ENST00000512554 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
GCSHP1-201ENST00000512554 SYNJ2O15056 1496 aa11.92□□□□□ -0.5
GCSHP1-201ENST00000512554 ST18O60284 1047 aa11.92□□□□□ -0.5
GCSHP1-201ENST00000512554 SNAPC4Q5SXM2 1469 aa11.91□□□□□ -0.5
GCSHP1-201ENST00000512554 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
GCSHP1-201ENST00000512554 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
GCSHP1-201ENST00000512554 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
GCSHP1-201ENST00000512554 EFCAB5A4FU69 1503 aa11.89□□□□□ -0.51
GCSHP1-201ENST00000512554 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
GCSHP1-201ENST00000512554 NUP160Q12769 1436 aa11.87□□□□□ -0.51
GCSHP1-201ENST00000512554 VPS8Q8N3P4 1428 aa11.87□□□□□ -0.51
GCSHP1-201ENST00000512554 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
GCSHP1-201ENST00000512554 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
GCSHP1-201ENST00000512554 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
GCSHP1-201ENST00000512554 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
GCSHP1-201ENST00000512554 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
GCSHP1-201ENST00000512554 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
GCSHP1-201ENST00000512554 PKD2Q13563 968 aa11.84□□□□□ -0.51
GCSHP1-201ENST00000512554 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
GCSHP1-201ENST00000512554 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
GCSHP1-201ENST00000512554 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
GCSHP1-201ENST00000512554 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
GCSHP1-201ENST00000512554 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
GCSHP1-201ENST00000512554 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
GCSHP1-201ENST00000512554 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
GCSHP1-201ENST00000512554 RGL2O15211 777 aa11.79□□□□□ -0.52
GCSHP1-201ENST00000512554 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
GCSHP1-201ENST00000512554 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
GCSHP1-201ENST00000512554 G3V3G9 751 aa11.77□□□□□ -0.53
GCSHP1-201ENST00000512554 FMN1Q68DA7 1419 aa11.77□□□□□ -0.53
GCSHP1-201ENST00000512554 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
GCSHP1-201ENST00000512554 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
GCSHP1-201ENST00000512554 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
GCSHP1-201ENST00000512554 CHD1O14646 1710 aa11.74□□□□□ -0.53
GCSHP1-201ENST00000512554 SNPHO15079 494 aa11.74□□□□□ -0.53
GCSHP1-201ENST00000512554 SOX12O15370 315 aa11.74□□□□□ -0.53
GCSHP1-201ENST00000512554 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
GCSHP1-201ENST00000512554 DISP1Q96F81 1524 aa11.74□□□□□ -0.53
GCSHP1-201ENST00000512554 STK25O00506 426 aa11.73□□□□□ -0.53
GCSHP1-201ENST00000512554 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
GCSHP1-201ENST00000512554 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
GCSHP1-201ENST00000512554 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
GCSHP1-201ENST00000512554 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms